RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 ABCA3Q99758 1704 aa23.76■■□□□ 1.39
CLIC1-208ENST00000375784 RGPD8O14715 1765 aaPredicted RBP23.76■■□□□ 1.39
CLIC1-208ENST00000375784 BTG4Q9NY30 223 aa23.76■■□□□ 1.39
CLIC1-208ENST00000375784 PMFBP1Q8TBY8 1022 aa23.75■■□□□ 1.39
CLIC1-208ENST00000375784 MINK1Q8N4C8 1332 aaPredicted RBP23.75■■□□□ 1.39
CLIC1-208ENST00000375784 KIAA1210Q9ULL0 1709 aa23.75■■□□□ 1.39
CLIC1-208ENST00000375784 EN1Q05925 392 aaPredicted RBP23.74■■□□□ 1.39
CLIC1-208ENST00000375784 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
CLIC1-208ENST00000375784 ANKARQ7Z5J8 1434 aa23.71■■□□□ 1.39
CLIC1-208ENST00000375784 NRAPQ86VF7 1730 aa23.7■■□□□ 1.39
CLIC1-208ENST00000375784 WASLO00401 505 aaPredicted RBP23.7■■□□□ 1.38
CLIC1-208ENST00000375784 R3HDM1Q15032 1099 aaKnown RBP23.7■■□□□ 1.38
CLIC1-208ENST00000375784 FAM182BQ5T319 152 aa23.7■■□□□ 1.38
CLIC1-208ENST00000375784 EIF3AQ14152 1382 aaKnown RBP23.69■■□□□ 1.38
CLIC1-208ENST00000375784 SPATA31A5Q5VU36 1347 aa23.68■■□□□ 1.38
CLIC1-208ENST00000375784 SPATA31A7Q8IWB4 1347 aa23.68■■□□□ 1.38
CLIC1-208ENST00000375784 DISP2A7MBM2 1401 aa23.67■■□□□ 1.38
CLIC1-208ENST00000375784 ROCK2O75116 1388 aaKnown RBP23.67■■□□□ 1.38
CLIC1-208ENST00000375784 COL14A1Q05707 1796 aaKnown RBP23.66■■□□□ 1.38
CLIC1-208ENST00000375784 NBPF8Q3BBV2 869 aa23.66■■□□□ 1.38
CLIC1-208ENST00000375784 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
CLIC1-208ENST00000375784 RGPD1P0DJD0 1748 aa23.65■■□□□ 1.38
CLIC1-208ENST00000375784 ADGRB2O60241 1585 aa23.65■■□□□ 1.38
CLIC1-208ENST00000375784 TRPM3Q9HCF6 1732 aaPredicted RBP23.64■■□□□ 1.38
CLIC1-208ENST00000375784 CLSPNQ9HAW4 1339 aa23.64■■□□□ 1.38
CLIC1-208ENST00000375784 CENPJQ9HC77 1338 aaPredicted RBP23.64■■□□□ 1.38
CLIC1-208ENST00000375784 EZH2Q15910 746 aaKnown RBP23.63■■□□□ 1.37
CLIC1-208ENST00000375784 ARHGEF28Q8N1W1 1705 aaKnown RBP23.63■■□□□ 1.37
CLIC1-208ENST00000375784 ALS2Q96Q42 1657 aa23.62■■□□□ 1.37
CLIC1-208ENST00000375784 CDK19Q9BWU1 502 aa23.61■■□□□ 1.37
CLIC1-208ENST00000375784 THSD7AQ9UPZ6 1657 aa23.6■■□□□ 1.37
CLIC1-208ENST00000375784 PRR36Q9H6K5 1346 aa23.6■■□□□ 1.37
CLIC1-208ENST00000375784 CAMKK2Q96RR4 588 aa23.6■■□□□ 1.37
CLIC1-208ENST00000375784 PRDM11Q9NQV5 511 aa23.6■■□□□ 1.37
CLIC1-208ENST00000375784 TRPM1Q7Z4N2 1603 aa23.59■■□□□ 1.37
CLIC1-208ENST00000375784 CARD11Q9BXL7 1154 aa23.59■■□□□ 1.37
CLIC1-208ENST00000375784 FAM196AQ6ZSG2 479 aa23.58■■□□□ 1.37
CLIC1-208ENST00000375784 NUDT16Q96DE0 195 aaKnown RBP23.58■■□□□ 1.37
CLIC1-208ENST00000375784 TIMELESSQ9UNS1 1208 aa23.58■■□□□ 1.37
CLIC1-208ENST00000375784 TNS1Q9HBL0 1735 aaKnown RBP23.58■■□□□ 1.37
CLIC1-208ENST00000375784 TULP4Q9NRJ4 1543 aa23.58■■□□□ 1.36
CLIC1-208ENST00000375784 PAK3O75914 559 aaPredicted RBP23.57■■□□□ 1.36
CLIC1-208ENST00000375784 TRIM37O94972 964 aa23.57■■□□□ 1.36
CLIC1-208ENST00000375784 NGDNQ8NEJ9 315 aaKnown RBP23.57■■□□□ 1.36
CLIC1-208ENST00000375784 CCER1Q8TC90 406 aaPredicted RBP23.57■■□□□ 1.36
CLIC1-208ENST00000375784 SPATA31A1Q5TZJ5 1347 aa23.57■■□□□ 1.36
CLIC1-208ENST00000375784 SRPK2P78362 688 aaKnown RBP23.55■■□□□ 1.36
CLIC1-208ENST00000375784 CCDC61Q9Y6R9 512 aa23.54■■□□□ 1.36
CLIC1-208ENST00000375784 PARD3Q8TEW0 1356 aa23.53■■□□□ 1.36
CLIC1-208ENST00000375784 KIAA0232Q92628 1395 aa23.53■■□□□ 1.36
CLIC1-208ENST00000375784 APBA3O96018 575 aa23.53■■□□□ 1.36
CLIC1-208ENST00000375784 CRYBG1Q9Y4K1 1723 aa23.53■■□□□ 1.36
CLIC1-208ENST00000375784 CHRNA2Q15822 529 aa23.52■■□□□ 1.36
CLIC1-208ENST00000375784 STRN4Q9NRL3 753 aa23.52■■□□□ 1.36
CLIC1-208ENST00000375784 EVC2Q86UK5 1308 aa23.51■■□□□ 1.35
CLIC1-208ENST00000375784 CABP2Q9NPB3 220 aa23.49■■□□□ 1.35
CLIC1-208ENST00000375784 ATP7BP35670 1465 aa23.49■■□□□ 1.35
CLIC1-208ENST00000375784 PLEKHG3A1L390 1219 aa23.47■■□□□ 1.35
CLIC1-208ENST00000375784 YY1P25490 414 aa23.47■■□□□ 1.35
CLIC1-208ENST00000375784 ZC3H6P61129 1189 aaKnown RBP23.47■■□□□ 1.35
CLIC1-208ENST00000375784 BARGINQ6ZT62 677 aa23.47■■□□□ 1.35
CLIC1-208ENST00000375784 USP35Q9P2H5 1018 aa23.47■■□□□ 1.35
CLIC1-208ENST00000375784 PDE3BQ13370 1112 aa23.46■■□□□ 1.35
CLIC1-208ENST00000375784 NBPF14Q5TI25 921 aa23.45■■□□□ 1.34
CLIC1-208ENST00000375784 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
CLIC1-208ENST00000375784 EVA1CP58658 441 aa23.44■■□□□ 1.34
CLIC1-208ENST00000375784 ACEP12821 1306 aa23.43■■□□□ 1.34
CLIC1-208ENST00000375784 NUTM2GQ5VZR2 741 aa23.43■■□□□ 1.34
CLIC1-208ENST00000375784 SSH2Q76I76 1423 aa23.42■■□□□ 1.34
CLIC1-208ENST00000375784 ITSN1Q15811 1721 aa23.42■■□□□ 1.34
CLIC1-208ENST00000375784 RREB1Q92766 1687 aa23.41■■□□□ 1.34
CLIC1-208ENST00000375784 PPIP5K1Q6PFW1 1433 aa23.41■■□□□ 1.34
CLIC1-208ENST00000375784 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
CLIC1-208ENST00000375784 POLR3AO14802 1390 aaPredicted RBP23.4■■□□□ 1.34
CLIC1-208ENST00000375784 SBNO2Q9Y2G9 1366 aa23.4■■□□□ 1.34
CLIC1-208ENST00000375784 SLC24A1O60721 1099 aa23.4■■□□□ 1.34
CLIC1-208ENST00000375784 LARP1Q6PKG0 1096 aaKnown RBP23.4■■□□□ 1.34
CLIC1-208ENST00000375784 CABP1Q9NZU7 370 aa23.4■■□□□ 1.34
CLIC1-208ENST00000375784 TCP11L2Q8N4U5 519 aa23.39■■□□□ 1.33
CLIC1-208ENST00000375784 SPON1Q9HCB6 807 aa23.39■■□□□ 1.33
CLIC1-208ENST00000375784 NUP188Q5SRE5 1749 aa23.39■■□□□ 1.33
CLIC1-208ENST00000375784 PPP1R1BQ9UD71 204 aaPredicted RBP23.37■■□□□ 1.33
CLIC1-208ENST00000375784 CAMTA1Q9Y6Y1 1673 aa23.37■■□□□ 1.33
CLIC1-208ENST00000375784 ST20-MTHFSA0A0A6YYL1 179 aa23.36■■□□□ 1.33
CLIC1-208ENST00000375784 KCNQ2O43526 872 aa23.36■■□□□ 1.33
CLIC1-208ENST00000375784 THRAP3Q9Y2W1 955 aaKnown RBP23.36■■□□□ 1.33
CLIC1-208ENST00000375784 CPDO75976 1380 aa23.35■■□□□ 1.33
CLIC1-208ENST00000375784 TOPAZ1Q8N9V7 1692 aa23.34■■□□□ 1.33
CLIC1-208ENST00000375784 BRD4O60885 1362 aaPredicted RBP23.33■■□□□ 1.33
CLIC1-208ENST00000375784 DCAF8L1A6NGE4 600 aa23.33■■□□□ 1.33
CLIC1-208ENST00000375784 ABTB2Q8N961 1025 aa23.33■■□□□ 1.33
CLIC1-208ENST00000375784 ZNF692Q9BU19 519 aaPredicted RBP23.33■■□□□ 1.33
CLIC1-208ENST00000375784 NRKQ7Z2Y5 1582 aa23.32■■□□□ 1.32
CLIC1-208ENST00000375784 NINLQ9Y2I6 1382 aa23.32■■□□□ 1.32
CLIC1-208ENST00000375784 C11orf95C9JLR9 678 aaPredicted RBP23.32■■□□□ 1.32
CLIC1-208ENST00000375784 USP19O94966 1318 aa23.32■■□□□ 1.32
CLIC1-208ENST00000375784 PUS7Q96PZ0 661 aaKnown RBP23.31■■□□□ 1.32
CLIC1-208ENST00000375784 LMO7Q8WWI1 1683 aa23.31■■□□□ 1.32
CLIC1-208ENST00000375784 USP47Q96K76 1375 aa23.3■■□□□ 1.32
CLIC1-208ENST00000375784 TESK2Q96S53 571 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms