RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 SSH2Q76I76 1423 aa22.5■■□□□ 1.19
C11orf88-202ENST00000375618 CD163L1Q9NR16 1453 aa22.5■■□□□ 1.19
C11orf88-202ENST00000375618 CPSF1Q10570 1443 aaKnown RBP22.49■■□□□ 1.19
C11orf88-202ENST00000375618 AKAP12Q02952 1782 aa22.49■■□□□ 1.19
C11orf88-202ENST00000375618 AFF2P51816 1311 aa22.49■■□□□ 1.19
C11orf88-202ENST00000375618 MARF1Q9Y4F3 1742 aaKnown RBP22.48■■□□□ 1.19
C11orf88-202ENST00000375618 NUTM2GQ5VZR2 741 aa22.48■■□□□ 1.19
C11orf88-202ENST00000375618 SLC12A5Q9H2X9 1139 aa22.48■■□□□ 1.19
C11orf88-202ENST00000375618 PUS7Q96PZ0 661 aaKnown RBP22.46■■□□□ 1.19
C11orf88-202ENST00000375618 HSPA5P11021 654 aaKnown RBP22.45■■□□□ 1.18
C11orf88-202ENST00000375618 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
C11orf88-202ENST00000375618 NRKQ7Z2Y5 1582 aa22.45■■□□□ 1.18
C11orf88-202ENST00000375618 MON2Q7Z3U7 1717 aa22.44■■□□□ 1.18
C11orf88-202ENST00000375618 TMC1Q8TDI8 760 aa22.44■■□□□ 1.18
C11orf88-202ENST00000375618 PHRF1Q9P1Y6 1649 aaKnown RBP22.43■■□□□ 1.18
C11orf88-202ENST00000375618 PIK3C2AO00443 1686 aa22.42■■□□□ 1.18
C11orf88-202ENST00000375618 TMF1P82094 1093 aa22.42■■□□□ 1.18
C11orf88-202ENST00000375618 FNBP4Q8N3X1 1017 aaPredicted RBP22.42■■□□□ 1.18
C11orf88-202ENST00000375618 BRD4O60885 1362 aaPredicted RBP22.41■■□□□ 1.18
C11orf88-202ENST00000375618 TTC21BQ7Z4L5 1316 aa22.41■■□□□ 1.18
C11orf88-202ENST00000375618 ZNF772Q68DY9 489 aaPredicted RBP22.41■■□□□ 1.18
C11orf88-202ENST00000375618 ABTB2Q8N961 1025 aa22.41■■□□□ 1.18
C11orf88-202ENST00000375618 BCL9LQ86UU0 1499 aa22.41■■□□□ 1.18
C11orf88-202ENST00000375618 A0A1W2PP64 1363 aa22.4■■□□□ 1.18
C11orf88-202ENST00000375618 KTN1Q86UP2 1357 aaKnown RBP22.4■■□□□ 1.18
C11orf88-202ENST00000375618 USP19O94966 1318 aa22.4■■□□□ 1.18
C11orf88-202ENST00000375618 HAP1P54257 671 aaPredicted RBP22.4■■□□□ 1.18
C11orf88-202ENST00000375618 EIF4G2P78344 907 aaKnown RBP eCLIP22.4■■□□□ 1.18
C11orf88-202ENST00000375618 ZNF692Q9BU19 519 aaPredicted RBP22.4■■□□□ 1.18
C11orf88-202ENST00000375618 FAM83GA6ND36 823 aa22.39■■□□□ 1.17
C11orf88-202ENST00000375618 SLIT2O94813 1529 aa22.39■■□□□ 1.17
C11orf88-202ENST00000375618 SLC24A1O60721 1099 aa22.38■■□□□ 1.17
C11orf88-202ENST00000375618 USP21Q9UK80 565 aa22.38■■□□□ 1.17
C11orf88-202ENST00000375618 MYOM1P52179 1685 aa22.36■■□□□ 1.17
C11orf88-202ENST00000375618 PLCH1Q4KWH8 1693 aa22.36■■□□□ 1.17
C11orf88-202ENST00000375618 ZRANB1Q9UGI0 708 aa22.36■■□□□ 1.17
C11orf88-202ENST00000375618 ATRNO75882 1429 aa22.35■■□□□ 1.17
C11orf88-202ENST00000375618 NINLQ9Y2I6 1382 aa22.35■■□□□ 1.17
C11orf88-202ENST00000375618 NLRP6P59044 892 aa22.34■■□□□ 1.17
C11orf88-202ENST00000375618 HDGFL2Q7Z4V5 671 aaPredicted RBP22.34■■□□□ 1.17
C11orf88-202ENST00000375618 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.34■■□□□ 1.17
C11orf88-202ENST00000375618 QTRT2Q9H974 415 aaKnown RBP22.34■■□□□ 1.17
C11orf88-202ENST00000375618 SLIT3O75094 1523 aa22.34■■□□□ 1.17
C11orf88-202ENST00000375618 KIAA0232Q92628 1395 aa22.34■■□□□ 1.17
C11orf88-202ENST00000375618 TTC21AQ8NDW8 1320 aa22.33■■□□□ 1.17
C11orf88-202ENST00000375618 C11orf95C9JLR9 678 aaPredicted RBP22.33■■□□□ 1.17
C11orf88-202ENST00000375618 ZC3H6P61129 1189 aaKnown RBP22.33■■□□□ 1.17
C11orf88-202ENST00000375618 NLRP13Q86W25 1043 aa22.33■■□□□ 1.17
C11orf88-202ENST00000375618 NME9Q86XW9 330 aa22.33■■□□□ 1.17
C11orf88-202ENST00000375618 TERF2IPQ9NYB0 399 aa22.33■■□□□ 1.17
C11orf88-202ENST00000375618 EDC4Q6P2E9 1401 aaKnown RBP22.32■■□□□ 1.16
C11orf88-202ENST00000375618 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.31■■□□□ 1.16
C11orf88-202ENST00000375618 COL14A1Q05707 1796 aaKnown RBP22.31■■□□□ 1.16
C11orf88-202ENST00000375618 ANKRD36BQ8N2N9 1353 aa22.31■■□□□ 1.16
C11orf88-202ENST00000375618 GCP02774 474 aa22.31■■□□□ 1.16
C11orf88-202ENST00000375618 CHRNA2Q15822 529 aa22.31■■□□□ 1.16
C11orf88-202ENST00000375618 NRAPQ86VF7 1730 aa22.31■■□□□ 1.16
C11orf88-202ENST00000375618 CDCA8Q53HL2 280 aa22.3■■□□□ 1.16
C11orf88-202ENST00000375618 UNC5CLQ8IV45 518 aa22.3■■□□□ 1.16
C11orf88-202ENST00000375618 NWD2Q9ULI1 1742 aa22.3■■□□□ 1.16
C11orf88-202ENST00000375618 PRDM11Q9NQV5 511 aa22.29■■□□□ 1.16
C11orf88-202ENST00000375618 TRPC5Q9UL62 973 aaPredicted RBP22.29■■□□□ 1.16
C11orf88-202ENST00000375618 USP31Q70CQ4 1352 aa22.28■■□□□ 1.16
C11orf88-202ENST00000375618 USP54Q70EL1 1684 aa22.28■■□□□ 1.16
C11orf88-202ENST00000375618 RXRBP28702 533 aa22.28■■□□□ 1.16
C11orf88-202ENST00000375618 CPDO75976 1380 aa22.27■■□□□ 1.16
C11orf88-202ENST00000375618 BTG4Q9NY30 223 aa22.27■■□□□ 1.16
C11orf88-202ENST00000375618 NFAT5O94916 1531 aa22.26■■□□□ 1.15
C11orf88-202ENST00000375618 GLI3P10071 1580 aa22.26■■□□□ 1.15
C11orf88-202ENST00000375618 RBM6P78332 1123 aaKnown RBP22.26■■□□□ 1.15
C11orf88-202ENST00000375618 CARD14Q9BXL6 1004 aa22.26■■□□□ 1.15
C11orf88-202ENST00000375618 LMO7Q8WWI1 1683 aa22.26■■□□□ 1.15
C11orf88-202ENST00000375618 RGS12O14924 1447 aa22.25■■□□□ 1.15
C11orf88-202ENST00000375618 POLR3GLQ9BT43 218 aa22.25■■□□□ 1.15
C11orf88-202ENST00000375618 OVOS2A0A0J9YW53 1432 aa22.24■■□□□ 1.15
C11orf88-202ENST00000375618 OVOS2Q6IE36 1432 aa22.24■■□□□ 1.15
C11orf88-202ENST00000375618 CAMTA1Q9Y6Y1 1673 aa22.24■■□□□ 1.15
C11orf88-202ENST00000375618 SOX12O15370 315 aa22.24■■□□□ 1.15
C11orf88-202ENST00000375618 CDK12Q9NYV4 1490 aaPredicted RBP22.23■■□□□ 1.15
C11orf88-202ENST00000375618 GJD4Q96KN9 370 aaPredicted RBP22.23■■□□□ 1.15
C11orf88-202ENST00000375618 SOCS7O14512 581 aa22.22■■□□□ 1.15
C11orf88-202ENST00000375618 VPS72Q15906 364 aa22.22■■□□□ 1.15
C11orf88-202ENST00000375618 COL18A1P39060 1754 aa22.21■■□□□ 1.15
C11orf88-202ENST00000375618 ZBTB7CA1YPR0 619 aa22.2■■□□□ 1.14
C11orf88-202ENST00000375618 ARHGEF25Q86VW2 580 aa22.19■■□□□ 1.14
C11orf88-202ENST00000375618 KIF7Q2M1P5 1343 aa22.19■■□□□ 1.14
C11orf88-202ENST00000375618 NSD3Q9BZ95 1437 aa22.19■■□□□ 1.14
C11orf88-202ENST00000375618 AATKQ6ZMQ8 1374 aa22.18■■□□□ 1.14
C11orf88-202ENST00000375618 FYB1O15117 783 aa22.18■■□□□ 1.14
C11orf88-202ENST00000375618 KCNH5Q8NCM2 988 aa22.18■■□□□ 1.14
C11orf88-202ENST00000375618 GGNBP2Q9H3C7 697 aa22.17■■□□□ 1.14
C11orf88-202ENST00000375618 STRN4Q9NRL3 753 aa22.17■■□□□ 1.14
C11orf88-202ENST00000375618 AXIN2Q9Y2T1 843 aa22.17■■□□□ 1.14
C11orf88-202ENST00000375618 FBLN1P23142 703 aa22.16■■□□□ 1.14
C11orf88-202ENST00000375618 CCDC9Q9Y3X0 531 aaKnown RBP22.16■■□□□ 1.14
C11orf88-202ENST00000375618 COL5A2P05997 1499 aaPredicted RBP22.15■■□□□ 1.14
C11orf88-202ENST00000375618 SPATA31A5Q5VU36 1347 aa22.15■■□□□ 1.14
C11orf88-202ENST00000375618 SPATA31A7Q8IWB4 1347 aa22.15■■□□□ 1.14
C11orf88-202ENST00000375618 KIF20BQ96Q89 1820 aa22.15■■□□□ 1.14
C11orf88-202ENST00000375618 LARP1Q6PKG0 1096 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms