RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
SDHD-201ENST00000375549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
SDHD-201ENST00000375549 SLAIN2Q9P270 581 aa16.73■□□□□ 0.27
SDHD-201ENST00000375549 EDC4Q6P2E9 1401 aaKnown RBP16.72■□□□□ 0.27
SDHD-201ENST00000375549 ILDR1Q86SU0 546 aaPredicted RBP16.72■□□□□ 0.27
SDHD-201ENST00000375549 USP6P35125 1406 aa16.72■□□□□ 0.27
SDHD-201ENST00000375549 PSME1Q06323 249 aa16.71■□□□□ 0.27
SDHD-201ENST00000375549 NPC1L1Q9UHC9 1359 aa16.71■□□□□ 0.27
SDHD-201ENST00000375549 FOXO3O43524 673 aa16.7■□□□□ 0.26
SDHD-201ENST00000375549 RALBP1Q15311 655 aa16.7■□□□□ 0.26
SDHD-201ENST00000375549 FYB1O15117 783 aa16.7■□□□□ 0.26
SDHD-201ENST00000375549 GGNBP2Q9H3C7 697 aa16.7■□□□□ 0.26
SDHD-201ENST00000375549 TTC21BQ7Z4L5 1316 aa16.69■□□□□ 0.26
SDHD-201ENST00000375549 AKAP12Q02952 1782 aa16.69■□□□□ 0.26
SDHD-201ENST00000375549 BRINP3Q76B58 766 aa16.69■□□□□ 0.26
SDHD-201ENST00000375549 MORC1Q86VD1 984 aa16.69■□□□□ 0.26
SDHD-201ENST00000375549 NME9Q86XW9 330 aa16.69■□□□□ 0.26
SDHD-201ENST00000375549 MON2Q7Z3U7 1717 aa16.68■□□□□ 0.26
SDHD-201ENST00000375549 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
SDHD-201ENST00000375549 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
SDHD-201ENST00000375549 NSD2O96028 1365 aa16.68■□□□□ 0.26
SDHD-201ENST00000375549 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
SDHD-201ENST00000375549 KIF1AQ12756 1690 aa16.67■□□□□ 0.26
SDHD-201ENST00000375549 KRT28Q7Z3Y7 464 aa16.66■□□□□ 0.26
SDHD-201ENST00000375549 DDX17Q92841 729 aaKnown RBP16.66■□□□□ 0.26
SDHD-201ENST00000375549 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
SDHD-201ENST00000375549 TTC21AQ8NDW8 1320 aa16.66■□□□□ 0.26
SDHD-201ENST00000375549 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
SDHD-201ENST00000375549 MYBBP1AQ9BQG0 1328 aaKnown RBP16.65■□□□□ 0.26
SDHD-201ENST00000375549 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
SDHD-201ENST00000375549 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.26
SDHD-201ENST00000375549 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
SDHD-201ENST00000375549 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
SDHD-201ENST00000375549 COG3Q96JB2 828 aa16.64■□□□□ 0.25
SDHD-201ENST00000375549 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
SDHD-201ENST00000375549 TOM1O60784 492 aa16.63■□□□□ 0.25
SDHD-201ENST00000375549 CERKQ8TCT0 537 aa16.63■□□□□ 0.25
SDHD-201ENST00000375549 POTEHQ6S545 545 aa16.62■□□□□ 0.25
SDHD-201ENST00000375549 ABTB2Q8N961 1025 aa16.62■□□□□ 0.25
SDHD-201ENST00000375549 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
SDHD-201ENST00000375549 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
SDHD-201ENST00000375549 KIF20BQ96Q89 1820 aa16.61■□□□□ 0.25
SDHD-201ENST00000375549 UBAP1LF5GYI3 381 aa16.61■□□□□ 0.25
SDHD-201ENST00000375549 NLRP6P59044 892 aa16.61■□□□□ 0.25
SDHD-201ENST00000375549 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
SDHD-201ENST00000375549 PIP4K2BP78356 416 aa16.6■□□□□ 0.25
SDHD-201ENST00000375549 NLRP13Q86W25 1043 aa16.6■□□□□ 0.25
SDHD-201ENST00000375549 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
SDHD-201ENST00000375549 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
SDHD-201ENST00000375549 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
SDHD-201ENST00000375549 USP31Q70CQ4 1352 aa16.58■□□□□ 0.24
SDHD-201ENST00000375549 PXDNQ92626 1479 aa16.57■□□□□ 0.24
SDHD-201ENST00000375549 OVOS2A0A0J9YW53 1432 aa16.57■□□□□ 0.24
SDHD-201ENST00000375549 OVOS2Q6IE36 1432 aa16.57■□□□□ 0.24
SDHD-201ENST00000375549 SBNO1A3KN83 1393 aa16.57■□□□□ 0.24
SDHD-201ENST00000375549 PIK3C2AO00443 1686 aa16.56■□□□□ 0.24
SDHD-201ENST00000375549 SOX12O15370 315 aa16.56■□□□□ 0.24
SDHD-201ENST00000375549 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
SDHD-201ENST00000375549 FBLN1P23142 703 aa16.56■□□□□ 0.24
SDHD-201ENST00000375549 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
SDHD-201ENST00000375549 SOS2Q07890 1332 aaPredicted RBP16.56■□□□□ 0.24
SDHD-201ENST00000375549 ROBO1Q9Y6N7 1651 aa16.55■□□□□ 0.24
SDHD-201ENST00000375549 TRPM3Q9HCF6 1732 aaPredicted RBP16.55■□□□□ 0.24
SDHD-201ENST00000375549 TNS3Q68CZ2 1445 aa16.54■□□□□ 0.24
SDHD-201ENST00000375549 SPATA31A3Q5VYP0 1347 aa16.54■□□□□ 0.24
SDHD-201ENST00000375549 MTHFSP49914 203 aa16.53■□□□□ 0.24
SDHD-201ENST00000375549 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.23
SDHD-201ENST00000375549 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.23
SDHD-201ENST00000375549 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.23
SDHD-201ENST00000375549 POLKQ9UBT6 870 aa16.52■□□□□ 0.23
SDHD-201ENST00000375549 NHSL1Q5SYE7 1610 aa16.51■□□□□ 0.23
SDHD-201ENST00000375549 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
SDHD-201ENST00000375549 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
SDHD-201ENST00000375549 EMILIN1Q9Y6C2 1016 aa16.5■□□□□ 0.23
SDHD-201ENST00000375549 ALS2Q96Q42 1657 aa16.5■□□□□ 0.23
SDHD-201ENST00000375549 AHDC1Q5TGY3 1603 aaPredicted RBP16.49■□□□□ 0.23
SDHD-201ENST00000375549 KCNH5Q8NCM2 988 aa16.49■□□□□ 0.23
SDHD-201ENST00000375549 USP19O94966 1318 aa16.49■□□□□ 0.23
SDHD-201ENST00000375549 GCP02774 474 aa16.48■□□□□ 0.23
SDHD-201ENST00000375549 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
SDHD-201ENST00000375549 LRRC59Q96AG4 307 aaKnown RBP16.48■□□□□ 0.23
SDHD-201ENST00000375549 USP54Q70EL1 1684 aa16.48■□□□□ 0.23
SDHD-201ENST00000375549 CABLES1Q8TDN4 633 aa16.47■□□□□ 0.23
SDHD-201ENST00000375549 ZBTB7CA1YPR0 619 aa16.46■□□□□ 0.23
SDHD-201ENST00000375549 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
SDHD-201ENST00000375549 MAP3K19Q56UN5 1328 aa16.46■□□□□ 0.23
SDHD-201ENST00000375549 MARF1Q9Y4F3 1742 aaKnown RBP16.46■□□□□ 0.23
SDHD-201ENST00000375549 AMPHP49418 695 aa16.45■□□□□ 0.22
SDHD-201ENST00000375549 SLIT3O75094 1523 aa16.45■□□□□ 0.22
SDHD-201ENST00000375549 MED1Q15648 1581 aaPredicted RBP16.45■□□□□ 0.22
SDHD-201ENST00000375549 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
SDHD-201ENST00000375549 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
SDHD-201ENST00000375549 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
SDHD-201ENST00000375549 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
SDHD-201ENST00000375549 PHLPP1O60346 1717 aa16.43■□□□□ 0.22
SDHD-201ENST00000375549 NFAT5O94916 1531 aa16.43■□□□□ 0.22
SDHD-201ENST00000375549 DSG3P32926 999 aa16.43■□□□□ 0.22
SDHD-201ENST00000375549 ZC3H6P61129 1189 aaKnown RBP16.43■□□□□ 0.22
SDHD-201ENST00000375549 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
SDHD-201ENST00000375549 CDK12Q9NYV4 1490 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms