RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 SF3B2Q13435 895 aaKnown RBP22.35■■□□□ 1.17
SDHB-201ENST00000375499 LMOD2Q6P5Q4 547 aa22.34■■□□□ 1.17
SDHB-201ENST00000375499 NGDNQ8NEJ9 315 aaKnown RBP22.34■■□□□ 1.17
SDHB-201ENST00000375499 SLIT2O94813 1529 aa22.34■■□□□ 1.17
SDHB-201ENST00000375499 EP400Q96L91 3159 aa22.34■■□□□ 1.17
SDHB-201ENST00000375499 ARHGEF10O15013 1369 aa22.34■■□□□ 1.17
SDHB-201ENST00000375499 CABP2Q9NPB3 220 aa22.33■■□□□ 1.17
SDHB-201ENST00000375499 POLR3AO14802 1390 aaPredicted RBP22.33■■□□□ 1.17
SDHB-201ENST00000375499 ONECUT3O60422 494 aaPredicted RBP22.32■■□□□ 1.16
SDHB-201ENST00000375499 PLCH1Q4KWH8 1693 aa22.32■■□□□ 1.16
SDHB-201ENST00000375499 CCDC61Q9Y6R9 512 aa22.31■■□□□ 1.16
SDHB-201ENST00000375499 SRPK2P78362 688 aaKnown RBP22.3■■□□□ 1.16
SDHB-201ENST00000375499 VPS72Q15906 364 aa22.3■■□□□ 1.16
SDHB-201ENST00000375499 PPIP5K1Q6PFW1 1433 aa22.3■■□□□ 1.16
SDHB-201ENST00000375499 ACEP12821 1306 aa22.3■■□□□ 1.16
SDHB-201ENST00000375499 PLEKHG3A1L390 1219 aa22.28■■□□□ 1.16
SDHB-201ENST00000375499 PCGF6Q9BYE7 350 aa22.28■■□□□ 1.16
SDHB-201ENST00000375499 PHRF1Q9P1Y6 1649 aaKnown RBP22.28■■□□□ 1.16
SDHB-201ENST00000375499 SEPT12Q8IYM1 358 aa22.27■■□□□ 1.16
SDHB-201ENST00000375499 GLI3P10071 1580 aa22.26■■□□□ 1.15
SDHB-201ENST00000375499 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
SDHB-201ENST00000375499 HAP1P54257 671 aaPredicted RBP22.26■■□□□ 1.15
SDHB-201ENST00000375499 CARD11Q9BXL7 1154 aa22.25■■□□□ 1.15
SDHB-201ENST00000375499 NRAPQ86VF7 1730 aa22.25■■□□□ 1.15
SDHB-201ENST00000375499 NWD2Q9ULI1 1742 aa22.25■■□□□ 1.15
SDHB-201ENST00000375499 KRT27Q7Z3Y8 459 aa22.23■■□□□ 1.15
SDHB-201ENST00000375499 DEFB132Q7Z7B7 95 aa22.23■■□□□ 1.15
SDHB-201ENST00000375499 EVC2Q86UK5 1308 aa22.23■■□□□ 1.15
SDHB-201ENST00000375499 SBNO2Q9Y2G9 1366 aa22.22■■□□□ 1.15
SDHB-201ENST00000375499 NUTM2GQ5VZR2 741 aa22.21■■□□□ 1.15
SDHB-201ENST00000375499 CABP1Q9NZU7 370 aa22.21■■□□□ 1.15
SDHB-201ENST00000375499 BRWD3Q6RI45 1802 aa22.21■■□□□ 1.15
SDHB-201ENST00000375499 AKAP12Q02952 1782 aa22.2■■□□□ 1.14
SDHB-201ENST00000375499 FAM83GA6ND36 823 aa22.2■■□□□ 1.14
SDHB-201ENST00000375499 NRKQ7Z2Y5 1582 aa22.2■■□□□ 1.14
SDHB-201ENST00000375499 COL14A1Q05707 1796 aaKnown RBP22.2■■□□□ 1.14
SDHB-201ENST00000375499 BAG6P46379 1132 aa22.19■■□□□ 1.14
SDHB-201ENST00000375499 CCDC9Q9Y3X0 531 aaKnown RBP22.19■■□□□ 1.14
SDHB-201ENST00000375499 USP6P35125 1406 aa22.19■■□□□ 1.14
SDHB-201ENST00000375499 PIK3C2AO00443 1686 aa22.17■■□□□ 1.14
SDHB-201ENST00000375499 LRP5O75197 1615 aa22.17■■□□□ 1.14
SDHB-201ENST00000375499 SSH2Q76I76 1423 aa22.16■■□□□ 1.14
SDHB-201ENST00000375499 USP19O94966 1318 aa22.14■■□□□ 1.14
SDHB-201ENST00000375499 KIAA0232Q92628 1395 aa22.13■■□□□ 1.13
SDHB-201ENST00000375499 ABTB2Q8N961 1025 aa22.13■■□□□ 1.13
SDHB-201ENST00000375499 MON2Q7Z3U7 1717 aa22.13■■□□□ 1.13
SDHB-201ENST00000375499 BTG4Q9NY30 223 aa22.12■■□□□ 1.13
SDHB-201ENST00000375499 CLSPNQ9HAW4 1339 aa22.11■■□□□ 1.13
SDHB-201ENST00000375499 CD163L1Q9NR16 1453 aa22.11■■□□□ 1.13
SDHB-201ENST00000375499 TESK2Q96S53 571 aa22.11■■□□□ 1.13
SDHB-201ENST00000375499 CPSF1Q10570 1443 aaKnown RBP22.11■■□□□ 1.13
SDHB-201ENST00000375499 CHRNA2Q15822 529 aa22.1■■□□□ 1.13
SDHB-201ENST00000375499 PRDM11Q9NQV5 511 aa22.1■■□□□ 1.13
SDHB-201ENST00000375499 BRD4O60885 1362 aaPredicted RBP22.1■■□□□ 1.13
SDHB-201ENST00000375499 ST20-MTHFSA0A0A6YYL1 179 aa22.09■■□□□ 1.13
SDHB-201ENST00000375499 ZC3H6P61129 1189 aaKnown RBP22.09■■□□□ 1.13
SDHB-201ENST00000375499 LMO7Q8WWI1 1683 aa22.09■■□□□ 1.13
SDHB-201ENST00000375499 SLIT3O75094 1523 aa22.09■■□□□ 1.13
SDHB-201ENST00000375499 A0A0G2JS52 829 aa22.08■■□□□ 1.13
SDHB-201ENST00000375499 MYT1Q01538 1121 aa22.08■■□□□ 1.13
SDHB-201ENST00000375499 USP47Q96K76 1375 aa22.07■■□□□ 1.12
SDHB-201ENST00000375499 FAM98CQ17RN3 349 aaKnown RBP22.06■■□□□ 1.12
SDHB-201ENST00000375499 TTC21BQ7Z4L5 1316 aa22.06■■□□□ 1.12
SDHB-201ENST00000375499 CAMTA1Q9Y6Y1 1673 aa22.05■■□□□ 1.12
SDHB-201ENST00000375499 CPDO75976 1380 aa22.04■■□□□ 1.12
SDHB-201ENST00000375499 NLRP13Q86W25 1043 aa22.04■■□□□ 1.12
SDHB-201ENST00000375499 KTN1Q86UP2 1357 aaKnown RBP22.03■■□□□ 1.12
SDHB-201ENST00000375499 PSDA5PKW4 1024 aaPredicted RBP22.03■■□□□ 1.12
SDHB-201ENST00000375499 GCP02774 474 aa22.03■■□□□ 1.12
SDHB-201ENST00000375499 NLRP6P59044 892 aa22.03■■□□□ 1.12
SDHB-201ENST00000375499 SLC12A5Q9H2X9 1139 aa22.03■■□□□ 1.12
SDHB-201ENST00000375499 SPATA31A5Q5VU36 1347 aa22.03■■□□□ 1.12
SDHB-201ENST00000375499 SPATA31A7Q8IWB4 1347 aa22.03■■□□□ 1.12
SDHB-201ENST00000375499 EN1Q05925 392 aaPredicted RBP22.02■■□□□ 1.12
SDHB-201ENST00000375499 DISP2A7MBM2 1401 aa22.02■■□□□ 1.12
SDHB-201ENST00000375499 THSD7AQ9UPZ6 1657 aa22.01■■□□□ 1.11
SDHB-201ENST00000375499 ZNF692Q9BU19 519 aaPredicted RBP22.01■■□□□ 1.11
SDHB-201ENST00000375499 USP54Q70EL1 1684 aa22.01■■□□□ 1.11
SDHB-201ENST00000375499 A0A1W2PP64 1363 aa22■■□□□ 1.11
SDHB-201ENST00000375499 RGPD1P0DJD0 1748 aa22■■□□□ 1.11
SDHB-201ENST00000375499 COL18A1P39060 1754 aa22■■□□□ 1.11
SDHB-201ENST00000375499 CCER1Q8TC90 406 aaPredicted RBP22■■□□□ 1.11
SDHB-201ENST00000375499 TMC1Q8TDI8 760 aa22■■□□□ 1.11
SDHB-201ENST00000375499 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
SDHB-201ENST00000375499 STRN4Q9NRL3 753 aa21.99■■□□□ 1.11
SDHB-201ENST00000375499 NFAT5O94916 1531 aa21.99■■□□□ 1.11
SDHB-201ENST00000375499 TTC21AQ8NDW8 1320 aa21.99■■□□□ 1.11
SDHB-201ENST00000375499 FAM196AQ6ZSG2 479 aa21.98■■□□□ 1.11
SDHB-201ENST00000375499 COL5A2P05997 1499 aaPredicted RBP21.97■■□□□ 1.11
SDHB-201ENST00000375499 PUS7Q96PZ0 661 aaKnown RBP21.97■■□□□ 1.11
SDHB-201ENST00000375499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.96■■□□□ 1.11
SDHB-201ENST00000375499 SPATA31A1Q5TZJ5 1347 aa21.96■■□□□ 1.11
SDHB-201ENST00000375499 PARD3Q8TEW0 1356 aa21.96■■□□□ 1.11
SDHB-201ENST00000375499 RGPD5Q99666 1765 aa21.95■■□□□ 1.1
SDHB-201ENST00000375499 R3HDM1Q15032 1099 aaKnown RBP21.95■■□□□ 1.1
SDHB-201ENST00000375499 NME9Q86XW9 330 aa21.95■■□□□ 1.1
SDHB-201ENST00000375499 EDC4Q6P2E9 1401 aaKnown RBP21.95■■□□□ 1.1
SDHB-201ENST00000375499 ZBTB7CA1YPR0 619 aa21.94■■□□□ 1.1
SDHB-201ENST00000375499 LARP1Q6PKG0 1096 aaKnown RBP21.94■■□□□ 1.1
SDHB-201ENST00000375499 SOX12O15370 315 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms