RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 ATAD2Q6PL18 1390 aa30.71■■■□□ 2.51
NINJ1-201ENST00000375446 TESK2Q96S53 571 aa30.69■■■□□ 2.5
NINJ1-201ENST00000375446 USP47Q96K76 1375 aa30.68■■■□□ 2.5
NINJ1-201ENST00000375446 USP21Q9UK80 565 aa30.68■■■□□ 2.5
NINJ1-201ENST00000375446 QTRT2Q9H974 415 aaKnown RBP30.67■■■□□ 2.5
NINJ1-201ENST00000375446 RXRBP28702 533 aa30.65■■■□□ 2.5
NINJ1-201ENST00000375446 BRD4O60885 1362 aaPredicted RBP30.65■■■□□ 2.5
NINJ1-201ENST00000375446 SLC24A1O60721 1099 aa30.64■■■□□ 2.5
NINJ1-201ENST00000375446 USP6P35125 1406 aa30.64■■■□□ 2.49
NINJ1-201ENST00000375446 NUTM2GQ5VZR2 741 aa30.63■■■□□ 2.49
NINJ1-201ENST00000375446 MARF1Q9Y4F3 1742 aaKnown RBP30.63■■■□□ 2.49
NINJ1-201ENST00000375446 ABCA3Q99758 1704 aa30.62■■■□□ 2.49
NINJ1-201ENST00000375446 ABTB2Q8N961 1025 aa30.62■■■□□ 2.49
NINJ1-201ENST00000375446 PUS7Q96PZ0 661 aaKnown RBP30.62■■■□□ 2.49
NINJ1-201ENST00000375446 ZNF692Q9BU19 519 aaPredicted RBP30.61■■■□□ 2.49
NINJ1-201ENST00000375446 BCL9LQ86UU0 1499 aa30.6■■■□□ 2.49
NINJ1-201ENST00000375446 TRPC5Q9UL62 973 aaPredicted RBP30.6■■■□□ 2.49
NINJ1-201ENST00000375446 SLIT2O94813 1529 aa30.58■■■□□ 2.49
NINJ1-201ENST00000375446 RBM6P78332 1123 aaKnown RBP30.58■■■□□ 2.49
NINJ1-201ENST00000375446 TMC1Q8TDI8 760 aa30.58■■■□□ 2.49
NINJ1-201ENST00000375446 SSH2Q76I76 1423 aa30.57■■■□□ 2.48
NINJ1-201ENST00000375446 FAM83GA6ND36 823 aa30.57■■■□□ 2.48
NINJ1-201ENST00000375446 ATRNO75882 1429 aa30.56■■■□□ 2.48
NINJ1-201ENST00000375446 CPSF1Q10570 1443 aaKnown RBP30.56■■■□□ 2.48
NINJ1-201ENST00000375446 UNC5CLQ8IV45 518 aa30.56■■■□□ 2.48
NINJ1-201ENST00000375446 NLRP13Q86W25 1043 aa30.55■■■□□ 2.48
NINJ1-201ENST00000375446 CRYBG1Q9Y4K1 1723 aa30.54■■■□□ 2.48
NINJ1-201ENST00000375446 TMF1P82094 1093 aa30.54■■■□□ 2.48
NINJ1-201ENST00000375446 SLC12A5Q9H2X9 1139 aa30.54■■■□□ 2.48
NINJ1-201ENST00000375446 KTN1Q86UP2 1357 aaKnown RBP30.54■■■□□ 2.48
NINJ1-201ENST00000375446 USP19O94966 1318 aa30.52■■■□□ 2.48
NINJ1-201ENST00000375446 TTC21BQ7Z4L5 1316 aa30.52■■■□□ 2.48
NINJ1-201ENST00000375446 CDK12Q9NYV4 1490 aaPredicted RBP30.52■■■□□ 2.48
NINJ1-201ENST00000375446 NLRP6P59044 892 aa30.5■■■□□ 2.47
NINJ1-201ENST00000375446 PRDM11Q9NQV5 511 aa30.5■■■□□ 2.47
NINJ1-201ENST00000375446 CD163L1Q9NR16 1453 aa30.5■■■□□ 2.47
NINJ1-201ENST00000375446 AKAP12Q02952 1782 aa30.49■■■□□ 2.47
NINJ1-201ENST00000375446 HDGFL2Q7Z4V5 671 aaPredicted RBP30.49■■■□□ 2.47
NINJ1-201ENST00000375446 TTC21AQ8NDW8 1320 aa30.48■■■□□ 2.47
NINJ1-201ENST00000375446 PHRF1Q9P1Y6 1649 aaKnown RBP30.48■■■□□ 2.47
NINJ1-201ENST00000375446 ZC3H6P61129 1189 aaKnown RBP30.48■■■□□ 2.47
NINJ1-201ENST00000375446 TERF2IPQ9NYB0 399 aa30.48■■■□□ 2.47
NINJ1-201ENST00000375446 KIAA0232Q92628 1395 aa30.48■■■□□ 2.47
NINJ1-201ENST00000375446 NINLQ9Y2I6 1382 aa30.47■■■□□ 2.47
NINJ1-201ENST00000375446 GCP02774 474 aa30.46■■■□□ 2.47
NINJ1-201ENST00000375446 GJD4Q96KN9 370 aaPredicted RBP30.46■■■□□ 2.47
NINJ1-201ENST00000375446 BTG4Q9NY30 223 aa30.46■■■□□ 2.47
NINJ1-201ENST00000375446 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.46■■■□□ 2.47
NINJ1-201ENST00000375446 PLCH1Q4KWH8 1693 aa30.46■■■□□ 2.47
NINJ1-201ENST00000375446 CDCA8Q53HL2 280 aa30.45■■■□□ 2.47
NINJ1-201ENST00000375446 RGS12O14924 1447 aa30.45■■■□□ 2.46
NINJ1-201ENST00000375446 COL14A1Q05707 1796 aaKnown RBP30.44■■■□□ 2.46
NINJ1-201ENST00000375446 VPS72Q15906 364 aa30.44■■■□□ 2.46
NINJ1-201ENST00000375446 NWD2Q9ULI1 1742 aa30.44■■■□□ 2.46
NINJ1-201ENST00000375446 A0A1W2PP64 1363 aa30.43■■■□□ 2.46
NINJ1-201ENST00000375446 EIF4G2P78344 907 aaKnown RBP eCLIP30.43■■■□□ 2.46
NINJ1-201ENST00000375446 CHRNA2Q15822 529 aa30.43■■■□□ 2.46
NINJ1-201ENST00000375446 NRKQ7Z2Y5 1582 aa30.43■■■□□ 2.46
NINJ1-201ENST00000375446 PIK3C2AO00443 1686 aa30.42■■■□□ 2.46
NINJ1-201ENST00000375446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.42■■■□□ 2.46
NINJ1-201ENST00000375446 MON2Q7Z3U7 1717 aa30.42■■■□□ 2.46
NINJ1-201ENST00000375446 CPDO75976 1380 aa30.41■■■□□ 2.46
NINJ1-201ENST00000375446 EDC4Q6P2E9 1401 aaKnown RBP30.39■■■□□ 2.46
NINJ1-201ENST00000375446 SLIT3O75094 1523 aa30.39■■■□□ 2.46
NINJ1-201ENST00000375446 CCDC9Q9Y3X0 531 aaKnown RBP30.39■■■□□ 2.46
NINJ1-201ENST00000375446 HSPA5P11021 654 aaKnown RBP30.38■■■□□ 2.45
NINJ1-201ENST00000375446 NME9Q86XW9 330 aa30.36■■■□□ 2.45
NINJ1-201ENST00000375446 NRAPQ86VF7 1730 aa30.36■■■□□ 2.45
NINJ1-201ENST00000375446 GLI3P10071 1580 aa30.35■■■□□ 2.45
NINJ1-201ENST00000375446 USP31Q70CQ4 1352 aa30.34■■■□□ 2.45
NINJ1-201ENST00000375446 ANKRD36BQ8N2N9 1353 aa30.34■■■□□ 2.45
NINJ1-201ENST00000375446 KCNH5Q8NCM2 988 aa30.34■■■□□ 2.45
NINJ1-201ENST00000375446 ZRANB1Q9UGI0 708 aa30.34■■■□□ 2.45
NINJ1-201ENST00000375446 ZBTB7CA1YPR0 619 aa30.31■■■□□ 2.44
NINJ1-201ENST00000375446 SOX12O15370 315 aa30.3■■■□□ 2.44
NINJ1-201ENST00000375446 STRN4Q9NRL3 753 aa30.3■■■□□ 2.44
NINJ1-201ENST00000375446 SPATA31A5Q5VU36 1347 aa30.28■■■□□ 2.44
NINJ1-201ENST00000375446 SPATA31A7Q8IWB4 1347 aa30.28■■■□□ 2.44
NINJ1-201ENST00000375446 CAMTA1Q9Y6Y1 1673 aa30.28■■■□□ 2.44
NINJ1-201ENST00000375446 EVA1CP58658 441 aa30.28■■■□□ 2.44
NINJ1-201ENST00000375446 AATKQ6ZMQ8 1374 aa30.28■■■□□ 2.44
NINJ1-201ENST00000375446 ONECUT3O60422 494 aaPredicted RBP30.27■■■□□ 2.44
NINJ1-201ENST00000375446 ARHGEF25Q86VW2 580 aa30.26■■■□□ 2.43
NINJ1-201ENST00000375446 LMO7Q8WWI1 1683 aa30.26■■■□□ 2.43
NINJ1-201ENST00000375446 SEPT12Q8IYM1 358 aa30.25■■■□□ 2.43
NINJ1-201ENST00000375446 NFAT5O94916 1531 aa30.24■■■□□ 2.43
NINJ1-201ENST00000375446 FAM98CQ17RN3 349 aaKnown RBP30.23■■■□□ 2.43
NINJ1-201ENST00000375446 POLR3GLQ9BT43 218 aa30.23■■■□□ 2.43
NINJ1-201ENST00000375446 USP54Q70EL1 1684 aa30.23■■■□□ 2.43
NINJ1-201ENST00000375446 SPATA31A1Q5TZJ5 1347 aa30.22■■■□□ 2.43
NINJ1-201ENST00000375446 OVOS2A0A0J9YW53 1432 aa30.22■■■□□ 2.43
NINJ1-201ENST00000375446 OVOS2Q6IE36 1432 aa30.22■■■□□ 2.43
NINJ1-201ENST00000375446 LARP1Q6PKG0 1096 aaKnown RBP30.21■■■□□ 2.43
NINJ1-201ENST00000375446 UPF1Q92900 1129 aaKnown RBP eCLIP30.21■■■□□ 2.435e-8■■■■■ 30.8
NINJ1-201ENST00000375446 COL5A2P05997 1499 aaPredicted RBP30.2■■■□□ 2.43
NINJ1-201ENST00000375446 A0A0G2JS52 829 aa30.19■■■□□ 2.42
NINJ1-201ENST00000375446 MYT1Q01538 1121 aa30.19■■■□□ 2.42
NINJ1-201ENST00000375446 COG3Q96JB2 828 aa30.19■■■□□ 2.42
NINJ1-201ENST00000375446 AXIN2Q9Y2T1 843 aa30.19■■■□□ 2.42
NINJ1-201ENST00000375446 MYOM1P52179 1685 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms