RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RBM42Q9BTD8 480 aaKnown RBP22.1■■□□□ 1.13
PTPDC1-202ENST00000375360 NFE2L2Q16236 605 aa22.1■■□□□ 1.13
PTPDC1-202ENST00000375360 FAM135AQ9P2D6 1515 aa22.09■■□□□ 1.13
PTPDC1-202ENST00000375360 PHF8Q9UPP1 1060 aa22.09■■□□□ 1.13
PTPDC1-202ENST00000375360 C20orf194Q5TEA3 1177 aa22.09■■□□□ 1.13
PTPDC1-202ENST00000375360 G3V3G9 751 aa22.08■■□□□ 1.13
PTPDC1-202ENST00000375360 DCAF8Q5TAQ9 597 aa22.08■■□□□ 1.13
PTPDC1-202ENST00000375360 NEUROD6Q96NK8 337 aa22.08■■□□□ 1.13
PTPDC1-202ENST00000375360 SMG6Q86US8 1419 aaKnown RBP22.07■■□□□ 1.12
PTPDC1-202ENST00000375360 TCOF1Q13428 1488 aaKnown RBP22.07■■□□□ 1.12
PTPDC1-202ENST00000375360 SKAP1Q86WV1 359 aa22.06■■□□□ 1.12
PTPDC1-202ENST00000375360 PPP6R1Q9UPN7 881 aa22.06■■□□□ 1.12
PTPDC1-202ENST00000375360 REC8O95072 547 aa22.06■■□□□ 1.12
PTPDC1-202ENST00000375360 GNAI3P08754 354 aa22.05■■□□□ 1.12
PTPDC1-202ENST00000375360 PIP4K2BP78356 416 aa22.05■■□□□ 1.12
PTPDC1-202ENST00000375360 DUOX2Q9NRD8 1548 aa22.05■■□□□ 1.12
PTPDC1-202ENST00000375360 ZNF518AQ6AHZ1 1483 aa22.05■■□□□ 1.12
PTPDC1-202ENST00000375360 CDK11BP21127 795 aaKnown RBP22.05■■□□□ 1.12
PTPDC1-202ENST00000375360 MYL6BP14649 208 aa22.04■■□□□ 1.12
PTPDC1-202ENST00000375360 TESK2Q96S53 571 aa22.04■■□□□ 1.12
PTPDC1-202ENST00000375360 ABCA5Q8WWZ7 1642 aa22.03■■□□□ 1.12
PTPDC1-202ENST00000375360 CABP4P57796 275 aa22.02■■□□□ 1.12
PTPDC1-202ENST00000375360 TNRQ92752 1358 aa22.02■■□□□ 1.12
PTPDC1-202ENST00000375360 AMER1Q5JTC6 1135 aaPredicted RBP22.02■■□□□ 1.12
PTPDC1-202ENST00000375360 SSH1Q8WYL5 1049 aa22.02■■□□□ 1.12
PTPDC1-202ENST00000375360 C22orf23Q9BZE7 217 aa22.02■■□□□ 1.12
PTPDC1-202ENST00000375360 ACEP12821 1306 aa22.02■■□□□ 1.12
PTPDC1-202ENST00000375360 MVPQ14764 893 aaKnown RBP22.01■■□□□ 1.11
PTPDC1-202ENST00000375360 ABCC2Q92887 1545 aa22.01■■□□□ 1.11
PTPDC1-202ENST00000375360 AAMPQ13685 434 aa22.01■■□□□ 1.11
PTPDC1-202ENST00000375360 PRAG1Q86YV5 1406 aa22.01■■□□□ 1.11
PTPDC1-202ENST00000375360 FYB1O15117 783 aa22.01■■□□□ 1.11
PTPDC1-202ENST00000375360 APPP05067 770 aa22■■□□□ 1.11
PTPDC1-202ENST00000375360 RUFY2Q8WXA3 655 aa22■■□□□ 1.11
PTPDC1-202ENST00000375360 HSP90AB4PQ58FF6 505 aa21.99■■□□□ 1.11
PTPDC1-202ENST00000375360 TMEM57Q8N5G2 664 aa21.99■■□□□ 1.11
PTPDC1-202ENST00000375360 CLASRPQ8N2M8 674 aaKnown RBP21.99■■□□□ 1.11
PTPDC1-202ENST00000375360 ITSN2Q9NZM3 1697 aa21.99■■□□□ 1.11
PTPDC1-202ENST00000375360 ZRANB1Q9UGI0 708 aa21.99■■□□□ 1.11
PTPDC1-202ENST00000375360 BTBD11A6QL63 1104 aa21.98■■□□□ 1.11
PTPDC1-202ENST00000375360 GNAI2P04899 355 aa21.98■■□□□ 1.11
PTPDC1-202ENST00000375360 KCNH5Q8NCM2 988 aa21.98■■□□□ 1.11
PTPDC1-202ENST00000375360 ZKSCAN1P17029 563 aaPredicted RBP21.98■■□□□ 1.11
PTPDC1-202ENST00000375360 RARSP54136 660 aaKnown RBP21.98■■□□□ 1.11
PTPDC1-202ENST00000375360 L1TD1Q5T7N2 865 aaKnown RBP21.98■■□□□ 1.11
PTPDC1-202ENST00000375360 INTS3Q68E01 1043 aaKnown RBP21.98■■□□□ 1.11
PTPDC1-202ENST00000375360 GNAT3A8MTJ3 354 aa21.97■■□□□ 1.11
PTPDC1-202ENST00000375360 NCKAP5LQ9HCH0 1330 aa21.97■■□□□ 1.11
PTPDC1-202ENST00000375360 FANCIQ9NVI1 1328 aa21.97■■□□□ 1.11
PTPDC1-202ENST00000375360 FAM83GA6ND36 823 aa21.97■■□□□ 1.11
PTPDC1-202ENST00000375360 SPG7Q9UQ90 795 aa21.97■■□□□ 1.11
PTPDC1-202ENST00000375360 SRCIN1Q9C0H9 1055 aa21.96■■□□□ 1.11
PTPDC1-202ENST00000375360 PTCD1O75127 700 aaKnown RBP21.96■■□□□ 1.11
PTPDC1-202ENST00000375360 HSP90AB2PQ58FF8 381 aa21.96■■□□□ 1.11
PTPDC1-202ENST00000375360 DUSP27Q5VZP5 1158 aa21.96■■□□□ 1.11
PTPDC1-202ENST00000375360 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.11
PTPDC1-202ENST00000375360 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.11
PTPDC1-202ENST00000375360 CT47B1P0C2W7 299 aaPredicted RBP21.95■■□□□ 1.1
PTPDC1-202ENST00000375360 VPS37DQ86XT2 251 aa21.95■■□□□ 1.1
PTPDC1-202ENST00000375360 DRC7Q8IY82 874 aa21.95■■□□□ 1.1
PTPDC1-202ENST00000375360 SIL1Q9H173 461 aa21.95■■□□□ 1.1
PTPDC1-202ENST00000375360 MPRIPQ6WCQ1 1025 aa21.94■■□□□ 1.1
PTPDC1-202ENST00000375360 PZPP20742 1482 aa21.94■■□□□ 1.1
PTPDC1-202ENST00000375360 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
PTPDC1-202ENST00000375360 MAGI3Q5TCQ9 1506 aa21.93■■□□□ 1.1
PTPDC1-202ENST00000375360 ERC2O15083 957 aa21.93■■□□□ 1.1
PTPDC1-202ENST00000375360 UHRF1BP1LA0JNW5 1464 aa21.93■■□□□ 1.1
PTPDC1-202ENST00000375360 CARD14Q9BXL6 1004 aa21.93■■□□□ 1.1
PTPDC1-202ENST00000375360 CEP170Q5SW79 1584 aa21.93■■□□□ 1.1
PTPDC1-202ENST00000375360 RALGAPBQ86X10 1494 aa21.93■■□□□ 1.1
PTPDC1-202ENST00000375360 CDC45O75419 566 aa21.92■■□□□ 1.1
PTPDC1-202ENST00000375360 NAP1L5Q96NT1 182 aaPredicted RBP21.92■■□□□ 1.1
PTPDC1-202ENST00000375360 DDX49Q9Y6V7 483 aaKnown RBP21.91■■□□□ 1.1
PTPDC1-202ENST00000375360 KRT28Q7Z3Y7 464 aa21.91■■□□□ 1.1
PTPDC1-202ENST00000375360 FAM184AQ8NB25 1140 aa21.91■■□□□ 1.1
PTPDC1-202ENST00000375360 CCT4P50991 539 aaKnown RBP21.91■■□□□ 1.1
PTPDC1-202ENST00000375360 F6X3S4 739 aa21.9■■□□□ 1.1
PTPDC1-202ENST00000375360 TARBP1Q13395 1621 aaKnown RBP21.9■■□□□ 1.1
PTPDC1-202ENST00000375360 IL1RAPL2Q9NP60 686 aa21.9■■□□□ 1.1
PTPDC1-202ENST00000375360 CHRNA2Q15822 529 aa21.9■■□□□ 1.1
PTPDC1-202ENST00000375360 WASHC4Q2M389 1173 aa21.89■■□□□ 1.1
PTPDC1-202ENST00000375360 GCC1Q96CN9 775 aa21.89■■□□□ 1.1
PTPDC1-202ENST00000375360 H3BQV1 296 aa21.89■■□□□ 1.09
PTPDC1-202ENST00000375360 IFFO2Q5TF58 517 aa21.89■■□□□ 1.09
PTPDC1-202ENST00000375360 GOLGA6L3A6NEY3 463 aa21.88■■□□□ 1.09
PTPDC1-202ENST00000375360 SRGAP3O43295 1099 aa21.88■■□□□ 1.09
PTPDC1-202ENST00000375360 HTATSF1O43719 755 aaKnown RBP21.88■■□□□ 1.09
PTPDC1-202ENST00000375360 ADAMTS2O95450 1211 aa21.88■■□□□ 1.09
PTPDC1-202ENST00000375360 MCTP1Q6DN14 999 aa21.88■■□□□ 1.09
PTPDC1-202ENST00000375360 SF3A1Q15459 793 aaKnown RBP21.88■■□□□ 1.09
PTPDC1-202ENST00000375360 FSD1Q9BTV5 496 aa21.88■■□□□ 1.09
PTPDC1-202ENST00000375360 EXOC6BQ9Y2D4 811 aa21.88■■□□□ 1.09
PTPDC1-202ENST00000375360 HSPA2P54652 639 aa21.87■■□□□ 1.09
PTPDC1-202ENST00000375360 LRRFIP1Q32MZ4 808 aaKnown RBP21.87■■□□□ 1.09
PTPDC1-202ENST00000375360 CCDC85AQ96PX6 553 aaPredicted RBP21.87■■□□□ 1.09
PTPDC1-202ENST00000375360 RIMS2Q9UQ26 1411 aa21.87■■□□□ 1.09
PTPDC1-202ENST00000375360 SYAP1Q96A49 352 aaPredicted RBP21.87■■□□□ 1.09
PTPDC1-202ENST00000375360 DNAJC2Q99543 621 aaKnown RBP21.87■■□□□ 1.09
PTPDC1-202ENST00000375360 TEX14Q8IWB6 1497 aa21.87■■□□□ 1.09
PTPDC1-202ENST00000375360 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms