RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ZNF853P0CG23 659 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 TNNT1P13805 278 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 DHX16O60231 1041 aaKnown RBP7.82□□□□□ -1.16
UBR4-204ENST00000375254 TRDNQ13061 729 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 ANKRD18BA2A2Z9 1011 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 KIF5CO60282 957 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 NEUROD2Q15784 382 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 EIF3AQ14152 1382 aaKnown RBP7.82□□□□□ -1.16
UBR4-204ENST00000375254 ARHGAP25P42331 645 aa7.81□□□□□ -1.16
UBR4-204ENST00000375254 CTCFLQ8NI51 663 aaPredicted RBP7.81□□□□□ -1.16
UBR4-204ENST00000375254 ERC1Q8IUD2 1116 aa7.81□□□□□ -1.16
UBR4-204ENST00000375254 AP1ARQ63HQ0 302 aa7.81□□□□□ -1.16
UBR4-204ENST00000375254 SPATS2Q86XZ4 545 aaKnown RBP7.81□□□□□ -1.16
UBR4-204ENST00000375254 SMARCC1Q92922 1105 aaPredicted RBP7.81□□□□□ -1.16
UBR4-204ENST00000375254 ZMAT2Q96NC0 199 aaKnown RBP7.81□□□□□ -1.16
UBR4-204ENST00000375254 MORC1Q86VD1 984 aa7.81□□□□□ -1.16
UBR4-204ENST00000375254 MSH5O43196 834 aa7.81□□□□□ -1.16
UBR4-204ENST00000375254 ARID4AP29374 1257 aaPredicted RBP7.81□□□□□ -1.16
UBR4-204ENST00000375254 PRDM10Q9NQV6 1147 aa7.81□□□□□ -1.16
UBR4-204ENST00000375254 EXOC6Q8TAG9 804 aa7.81□□□□□ -1.16
UBR4-204ENST00000375254 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 CCDC172P0C7W6 258 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 SFPQP23246 707 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBR4-204ENST00000375254 PIP4K2BP78356 416 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 HSP90AB4PQ58FF6 505 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 VCXQ9H320 206 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 WASHC2CQ9Y4E1 1318 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 OPA1O60313 960 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 NOLC1Q14978 699 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBR4-204ENST00000375254 CCDC175P0C221 793 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 C10orf67Q8IYJ2 551 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 TERF2IPQ9NYB0 399 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 EIF5P55010 431 aaKnown RBP7.8□□□□□ -1.16
UBR4-204ENST00000375254 SAFBQ15424 915 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBR4-204ENST00000375254 RLBP1P12271 317 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 RTF1Q92541 710 aaKnown RBP7.8□□□□□ -1.16
UBR4-204ENST00000375254 SMC1AQ14683 1233 aaKnown RBP7.8□□□□□ -1.16
UBR4-204ENST00000375254 ANKRD1Q15327 319 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 STAG3Q9UJ98 1225 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 WASHC2AQ641Q2 1341 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 XRCC6P12956 609 aaKnown RBP eCLIP7.8□□□□□ -1.163e-6■□□□□ 9.8
UBR4-204ENST00000375254 RASSF8Q8NHQ8 419 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 CRBNQ96SW2 442 aa7.8□□□□□ -1.16
UBR4-204ENST00000375254 TEX2Q8IWB9 1127 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 NAA15Q9BXJ9 866 aaKnown RBP7.79□□□□□ -1.16
UBR4-204ENST00000375254 C6orf163Q5TEZ5 329 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 KLHL34Q8N239 644 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 DDX12PQ92771 950 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 PCMTD1Q96MG8 357 aaPredicted RBP7.79□□□□□ -1.16
UBR4-204ENST00000375254 FAM184BQ9ULE4 1060 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 SKIDA1Q1XH10 827 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 FOXD4L1Q9NU39 408 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 PPP1R12BO60237 982 aaPredicted RBP7.79□□□□□ -1.16
UBR4-204ENST00000375254 RPAINQ86UA6 219 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 ZNF397Q8NF99 534 aaPredicted RBP7.79□□□□□ -1.16
UBR4-204ENST00000375254 ZNF777Q9ULD5 760 aaPredicted RBP7.79□□□□□ -1.16
UBR4-204ENST00000375254 NOL7Q9UMY1 257 aaKnown RBP7.79□□□□□ -1.16
UBR4-204ENST00000375254 RNF187Q5TA31 235 aaPredicted RBP7.79□□□□□ -1.16
UBR4-204ENST00000375254 PDILTQ8N807 584 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 RSF1Q96T23 1441 aaPredicted RBP7.79□□□□□ -1.16
UBR4-204ENST00000375254 CDC45O75419 566 aa7.79□□□□□ -1.16
UBR4-204ENST00000375254 CCDC183Q5T5S1 534 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 TNIKQ9UKE5 1360 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 ZKSCAN8Q15776 578 aaPredicted RBP7.78□□□□□ -1.16
UBR4-204ENST00000375254 GCOM1H8Y6P7 765 aaPredicted RBP7.78□□□□□ -1.16
UBR4-204ENST00000375254 MYZAPP0CAP1 466 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 LMNTD2Q8IXW0 634 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 WDR63Q8IWG1 891 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 CEP112Q8N8E3 955 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 EHBP1Q8NDI1 1231 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 CEP104O60308 925 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 DZIP1Q86YF9 867 aaKnown RBP7.78□□□□□ -1.16
UBR4-204ENST00000375254 CEP57L1Q8IYX8 460 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 CCDC40Q4G0X9 1142 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 MAPK8IP2Q13387 824 aaPredicted RBP7.78□□□□□ -1.16
UBR4-204ENST00000375254 PRKRIP1Q9H875 184 aaPredicted RBP7.78□□□□□ -1.16
UBR4-204ENST00000375254 SIN3AQ96ST3 1273 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 CCDC171Q6TFL3 1326 aa7.78□□□□□ -1.16
UBR4-204ENST00000375254 CEP135Q66GS9 1140 aa7.77□□□□□ -1.16
UBR4-204ENST00000375254 CCDC121Q6ZUS5 278 aa7.77□□□□□ -1.16
UBR4-204ENST00000375254 CEP83Q9Y592 693 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 K7ELQ4 463 aaPredicted RBP7.77□□□□□ -1.17
UBR4-204ENST00000375254 HIP1O00291 1037 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 CAPN2P17655 700 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 CEP57Q86XR8 500 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 MYBBP1AQ9BQG0 1328 aaKnown RBP7.77□□□□□ -1.17
UBR4-204ENST00000375254 SLC8A1P32418 973 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 ZKSCAN5Q9Y2L8 839 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 DMTNQ08495 405 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 GORABQ5T7V8 394 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 SPDYE4A6NLX3 237 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 SERPINC1P01008 464 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 CCDC181Q5TID7 509 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 CHIC2Q9UKJ5 165 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 LUC7L3O95232 432 aaKnown RBP7.77□□□□□ -1.17
UBR4-204ENST00000375254 HDXQ7Z353 690 aa7.77□□□□□ -1.17
UBR4-204ENST00000375254 CPLX1O14810 134 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 KLHL40Q2TBA0 621 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 STMN4Q9H169 189 aaPredicted RBP7.76□□□□□ -1.17
UBR4-204ENST00000375254 SPATS2LQ9NUQ6 558 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms