RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 UGGT1Q9NYU2 1555 aa25.59■■□□□ 1.69
TMEFF1-201ENST00000374879 CSPP1Q1MSJ5 1256 aa25.59■■□□□ 1.69
TMEFF1-201ENST00000374879 SASS6Q6UVJ0 657 aa25.59■■□□□ 1.69
TMEFF1-201ENST00000374879 BAG4O95429 457 aaKnown RBP25.58■■□□□ 1.69
TMEFF1-201ENST00000374879 RRP7AQ9Y3A4 280 aaKnown RBP25.58■■□□□ 1.69
TMEFF1-201ENST00000374879 KIAA1210Q9ULL0 1709 aa25.58■■□□□ 1.69
TMEFF1-201ENST00000374879 KIF2CQ99661 725 aa25.58■■□□□ 1.69
TMEFF1-201ENST00000374879 KDM5AP29375 1690 aaKnown RBP25.56■■□□□ 1.68
TMEFF1-201ENST00000374879 ADGRF5Q8IZF2 1346 aa25.56■■□□□ 1.68
TMEFF1-201ENST00000374879 NPC1L1Q9UHC9 1359 aa25.56■■□□□ 1.68
TMEFF1-201ENST00000374879 NCLP19338 710 aaKnown RBP25.56■■□□□ 1.68
TMEFF1-201ENST00000374879 CAVIN1Q6NZI2 390 aaKnown RBP25.56■■□□□ 1.68
TMEFF1-201ENST00000374879 ZSCAN23Q3MJ62 389 aa25.55■■□□□ 1.68
TMEFF1-201ENST00000374879 CLEC17AQ6ZS10 378 aa25.55■■□□□ 1.68
TMEFF1-201ENST00000374879 MROH1Q8NDA8 1641 aa25.55■■□□□ 1.68
TMEFF1-201ENST00000374879 MAP3K4Q9Y6R4 1608 aa25.55■■□□□ 1.68
TMEFF1-201ENST00000374879 NEURL4Q96JN8 1562 aa25.54■■□□□ 1.68
TMEFF1-201ENST00000374879 K7ELQ4 463 aaPredicted RBP25.54■■□□□ 1.68
TMEFF1-201ENST00000374879 GAS2L2Q8NHY3 880 aa25.54■■□□□ 1.68
TMEFF1-201ENST00000374879 ABCA6Q8N139 1617 aa25.53■■□□□ 1.68
TMEFF1-201ENST00000374879 MYOM2P54296 1465 aa25.53■■□□□ 1.68
TMEFF1-201ENST00000374879 RBM42Q9BTD8 480 aaKnown RBP25.52■■□□□ 1.68
TMEFF1-201ENST00000374879 PRIM1P49642 420 aaKnown RBP25.52■■□□□ 1.68
TMEFF1-201ENST00000374879 PDE4CQ08493 712 aa25.52■■□□□ 1.68
TMEFF1-201ENST00000374879 ERVK-7P63135 1459 aa25.51■■□□□ 1.67
TMEFF1-201ENST00000374879 HDAC1Q13547 482 aaPredicted RBP25.51■■□□□ 1.67
TMEFF1-201ENST00000374879 MCTP1Q6DN14 999 aa25.51■■□□□ 1.67
TMEFF1-201ENST00000374879 FTSJ3Q8IY81 847 aaKnown RBP25.5■■□□□ 1.67
TMEFF1-201ENST00000374879 JARID2Q92833 1246 aaPredicted RBP25.5■■□□□ 1.67
TMEFF1-201ENST00000374879 SLC24A1O60721 1099 aa25.5■■□□□ 1.67
TMEFF1-201ENST00000374879 KIF1BO60333 1816 aa25.5■■□□□ 1.67
TMEFF1-201ENST00000374879 MCM5P33992 734 aa25.5■■□□□ 1.67
TMEFF1-201ENST00000374879 DZIP1LQ8IYY4 767 aaKnown RBP25.5■■□□□ 1.67
TMEFF1-201ENST00000374879 BBXQ8WY36 941 aaPredicted RBP25.5■■□□□ 1.67
TMEFF1-201ENST00000374879 EFCAB6Q5THR3 1501 aa25.49■■□□□ 1.67
TMEFF1-201ENST00000374879 AK9Q5TCS8 1911 aa25.49■■□□□ 1.67
TMEFF1-201ENST00000374879 ZKSCAN2Q63HK3 967 aa25.48■■□□□ 1.67
TMEFF1-201ENST00000374879 ASXL2Q76L83 1435 aa25.48■■□□□ 1.67
TMEFF1-201ENST00000374879 CARD14Q9BXL6 1004 aa25.46■■□□□ 1.67
TMEFF1-201ENST00000374879 LMBRD1Q9NUN5 540 aa25.46■■□□□ 1.67
TMEFF1-201ENST00000374879 CBX1P83916 185 aa25.46■■□□□ 1.67
TMEFF1-201ENST00000374879 PPP4R3BQ5MIZ7 849 aa25.45■■□□□ 1.66
TMEFF1-201ENST00000374879 TCP11L2Q8N4U5 519 aa25.45■■□□□ 1.66
TMEFF1-201ENST00000374879 TSC1Q92574 1164 aa25.45■■□□□ 1.66
TMEFF1-201ENST00000374879 KIDINS220Q9ULH0 1771 aa25.45■■□□□ 1.66
TMEFF1-201ENST00000374879 MROH2AA6NES4 1674 aa25.45■■□□□ 1.66
TMEFF1-201ENST00000374879 PPRC1Q5VV67 1664 aaKnown RBP25.45■■□□□ 1.66
TMEFF1-201ENST00000374879 CCDC39Q9UFE4 941 aa25.45■■□□□ 1.66
TMEFF1-201ENST00000374879 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
TMEFF1-201ENST00000374879 TNNT2P45379 298 aaPredicted RBP25.44■■□□□ 1.66
TMEFF1-201ENST00000374879 ARHGAP31Q2M1Z3 1444 aa25.44■■□□□ 1.66
TMEFF1-201ENST00000374879 IFT172Q9UG01 1749 aa25.44■■□□□ 1.66
TMEFF1-201ENST00000374879 GTF2E1P29083 439 aaPredicted RBP25.43■■□□□ 1.66
TMEFF1-201ENST00000374879 WDR63Q8IWG1 891 aa25.43■■□□□ 1.66
TMEFF1-201ENST00000374879 RBM27Q9P2N5 1060 aaKnown RBP25.43■■□□□ 1.66
TMEFF1-201ENST00000374879 CHGAP10645 457 aaKnown RBP25.43■■□□□ 1.66
TMEFF1-201ENST00000374879 LNPKQ9C0E8 428 aa25.43■■□□□ 1.66
TMEFF1-201ENST00000374879 ZNF710Q8N1W2 664 aa25.42■■□□□ 1.66
TMEFF1-201ENST00000374879 MYRIPQ8NFW9 859 aa25.42■■□□□ 1.66
TMEFF1-201ENST00000374879 RUNDC1Q96C34 613 aa25.42■■□□□ 1.66
TMEFF1-201ENST00000374879 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
TMEFF1-201ENST00000374879 GTPBP4Q9BZE4 634 aaKnown RBP25.42■■□□□ 1.66
TMEFF1-201ENST00000374879 ITPRIPQ8IWB1 547 aa25.41■■□□□ 1.66
TMEFF1-201ENST00000374879 NOS1P29475 1434 aa25.41■■□□□ 1.66
TMEFF1-201ENST00000374879 NRXN1Q9ULB1 1477 aa25.4■■□□□ 1.66
TMEFF1-201ENST00000374879 ZNF518AQ6AHZ1 1483 aa25.4■■□□□ 1.66
TMEFF1-201ENST00000374879 KIF20AO95235 890 aa25.39■■□□□ 1.65
TMEFF1-201ENST00000374879 NUCB1Q02818 461 aa25.39■■□□□ 1.65
TMEFF1-201ENST00000374879 TRIM27P14373 513 aa25.38■■□□□ 1.65
TMEFF1-201ENST00000374879 GPT2Q8TD30 523 aa25.38■■□□□ 1.65
TMEFF1-201ENST00000374879 LMTK2Q8IWU2 1503 aa25.38■■□□□ 1.65
TMEFF1-201ENST00000374879 POLR3AO14802 1390 aaPredicted RBP25.38■■□□□ 1.65
TMEFF1-201ENST00000374879 SBNO2Q9Y2G9 1366 aa25.38■■□□□ 1.65
TMEFF1-201ENST00000374879 ATP2B3Q16720 1220 aa25.37■■□□□ 1.65
TMEFF1-201ENST00000374879 PKP1Q13835 747 aa25.37■■□□□ 1.65
TMEFF1-201ENST00000374879 DDX19BQ9UMR2 479 aa25.37■■□□□ 1.65
TMEFF1-201ENST00000374879 PRPF40AO75400 957 aaKnown RBP25.36■■□□□ 1.65
TMEFF1-201ENST00000374879 MYO3AQ8NEV4 1616 aa25.36■■□□□ 1.65
TMEFF1-201ENST00000374879 DNTTIP2Q5QJE6 756 aaKnown RBP25.36■■□□□ 1.65
TMEFF1-201ENST00000374879 TRAK1Q9UPV9 953 aa25.36■■□□□ 1.65
TMEFF1-201ENST00000374879 ADGRB3O60242 1522 aa25.36■■□□□ 1.65
TMEFF1-201ENST00000374879 KIF16BQ96L93 1317 aa25.36■■□□□ 1.65
TMEFF1-201ENST00000374879 BMP2KLQ5H9B9 411 aa25.35■■□□□ 1.65
TMEFF1-201ENST00000374879 LRSAM1Q6UWE0 723 aa25.35■■□□□ 1.65
TMEFF1-201ENST00000374879 KIAA2012Q0VF49 1180 aa25.34■■□□□ 1.65
TMEFF1-201ENST00000374879 SYCE3A1L190 88 aa25.34■■□□□ 1.65
TMEFF1-201ENST00000374879 CHD1LQ86WJ1 897 aa25.34■■□□□ 1.65
TMEFF1-201ENST00000374879 SMC4Q9NTJ3 1288 aa25.34■■□□□ 1.65
TMEFF1-201ENST00000374879 LETM1O95202 739 aaPredicted RBP25.33■■□□□ 1.65
TMEFF1-201ENST00000374879 CYP2E1P05181 493 aaPredicted RBP25.33■■□□□ 1.65
TMEFF1-201ENST00000374879 NUCB2P80303 420 aa25.33■■□□□ 1.65
TMEFF1-201ENST00000374879 GGT6Q6P531 493 aa25.33■■□□□ 1.65
TMEFF1-201ENST00000374879 IQSEC2Q5JU85 1478 aa25.33■■□□□ 1.65
TMEFF1-201ENST00000374879 TBC1D9Q6ZT07 1266 aa25.33■■□□□ 1.65
TMEFF1-201ENST00000374879 RNF214Q8ND24 703 aa25.33■■□□□ 1.65
TMEFF1-201ENST00000374879 TMEM63CQ9P1W3 806 aa25.33■■□□□ 1.65
TMEFF1-201ENST00000374879 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.33■■□□□ 1.65
TMEFF1-201ENST00000374879 CFAP65Q6ZU64 1925 aaKnown RBP25.32■■□□□ 1.64
TMEFF1-201ENST00000374879 NPATQ14207 1427 aa25.32■■□□□ 1.64
TMEFF1-201ENST00000374879 FAM177BA6PVY3 158 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms