RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 IQSEC2Q5JU85 1478 aa23.42■■□□□ 1.34
HLA-DMA-201ENST00000374843 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
HLA-DMA-201ENST00000374843 PIK3C2AO00443 1686 aa23.41■■□□□ 1.34
HLA-DMA-201ENST00000374843 FYB1O15117 783 aa23.41■■□□□ 1.34
HLA-DMA-201ENST00000374843 OVOS2A0A0J9YW53 1432 aa23.41■■□□□ 1.34
HLA-DMA-201ENST00000374843 OVOS2Q6IE36 1432 aa23.41■■□□□ 1.34
HLA-DMA-201ENST00000374843 ORAI2Q96SN7 254 aa23.4■■□□□ 1.34
HLA-DMA-201ENST00000374843 USP31Q70CQ4 1352 aa23.38■■□□□ 1.33
HLA-DMA-201ENST00000374843 NLRP13Q86W25 1043 aa23.37■■□□□ 1.33
HLA-DMA-201ENST00000374843 SCAF1Q9H7N4 1312 aaKnown RBP23.36■■□□□ 1.33
HLA-DMA-201ENST00000374843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.36■■□□□ 1.33
HLA-DMA-201ENST00000374843 MARF1Q9Y4F3 1742 aaKnown RBP23.36■■□□□ 1.33
HLA-DMA-201ENST00000374843 NHSL1Q5SYE7 1610 aa23.35■■□□□ 1.33
HLA-DMA-201ENST00000374843 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
HLA-DMA-201ENST00000374843 MORC1Q86VD1 984 aa23.35■■□□□ 1.33
HLA-DMA-201ENST00000374843 NME9Q86XW9 330 aa23.35■■□□□ 1.33
HLA-DMA-201ENST00000374843 GGNBP2Q9H3C7 697 aa23.35■■□□□ 1.33
HLA-DMA-201ENST00000374843 SLAIN2Q9P270 581 aa23.35■■□□□ 1.33
HLA-DMA-201ENST00000374843 PXDNQ92626 1479 aa23.35■■□□□ 1.33
HLA-DMA-201ENST00000374843 PPP2R1AP30153 589 aa23.34■■□□□ 1.33
HLA-DMA-201ENST00000374843 BRINP3Q76B58 766 aa23.34■■□□□ 1.33
HLA-DMA-201ENST00000374843 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.32
HLA-DMA-201ENST00000374843 ALS2Q96Q42 1657 aa23.32■■□□□ 1.32
HLA-DMA-201ENST00000374843 SBNO1A3KN83 1393 aa23.32■■□□□ 1.32
HLA-DMA-201ENST00000374843 SMG6Q86US8 1419 aaKnown RBP23.32■■□□□ 1.32
HLA-DMA-201ENST00000374843 AATKQ6ZMQ8 1374 aa23.3■■□□□ 1.32
HLA-DMA-201ENST00000374843 FOXO3O43524 673 aa23.3■■□□□ 1.32
HLA-DMA-201ENST00000374843 PSME1Q06323 249 aa23.29■■□□□ 1.32
HLA-DMA-201ENST00000374843 CCDC184Q52MB2 194 aa23.29■■□□□ 1.32
HLA-DMA-201ENST00000374843 COG3Q96JB2 828 aa23.29■■□□□ 1.32
HLA-DMA-201ENST00000374843 MRS2Q9HD23 443 aa23.28■■□□□ 1.32
HLA-DMA-201ENST00000374843 AHDC1Q5TGY3 1603 aaPredicted RBP23.28■■□□□ 1.32
HLA-DMA-201ENST00000374843 ROBO1Q9Y6N7 1651 aa23.28■■□□□ 1.32
HLA-DMA-201ENST00000374843 MED1Q15648 1581 aaPredicted RBP23.27■■□□□ 1.32
HLA-DMA-201ENST00000374843 TNS3Q68CZ2 1445 aa23.26■■□□□ 1.31
HLA-DMA-201ENST00000374843 KRT28Q7Z3Y7 464 aa23.26■■□□□ 1.31
HLA-DMA-201ENST00000374843 ZRANB1Q9UGI0 708 aa23.26■■□□□ 1.31
HLA-DMA-201ENST00000374843 SLIT3O75094 1523 aa23.26■■□□□ 1.31
HLA-DMA-201ENST00000374843 SOS2Q07890 1332 aaPredicted RBP23.25■■□□□ 1.31
HLA-DMA-201ENST00000374843 COL3A1P02461 1466 aaPredicted RBP23.23■■□□□ 1.31
HLA-DMA-201ENST00000374843 CDK12Q9NYV4 1490 aaPredicted RBP23.23■■□□□ 1.31
HLA-DMA-201ENST00000374843 NFAT5O94916 1531 aa23.23■■□□□ 1.31
HLA-DMA-201ENST00000374843 USP19O94966 1318 aa23.22■■□□□ 1.31
HLA-DMA-201ENST00000374843 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
HLA-DMA-201ENST00000374843 ABTB2Q8N961 1025 aa23.21■■□□□ 1.31
HLA-DMA-201ENST00000374843 INSRP06213 1382 aa23.21■■□□□ 1.31
HLA-DMA-201ENST00000374843 CRYBG1Q9Y4K1 1723 aa23.2■■□□□ 1.3
HLA-DMA-201ENST00000374843 ARHGEF10O15013 1369 aa23.2■■□□□ 1.3
HLA-DMA-201ENST00000374843 PNPLA6Q8IY17 1366 aa23.2■■□□□ 1.3
HLA-DMA-201ENST00000374843 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
HLA-DMA-201ENST00000374843 TNNT2P45379 298 aaPredicted RBP23.2■■□□□ 1.3
HLA-DMA-201ENST00000374843 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
HLA-DMA-201ENST00000374843 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
HLA-DMA-201ENST00000374843 NLRP6P59044 892 aa23.19■■□□□ 1.3
HLA-DMA-201ENST00000374843 DDX17Q92841 729 aaKnown RBP23.19■■□□□ 1.3
HLA-DMA-201ENST00000374843 PHRF1Q9P1Y6 1649 aaKnown RBP23.19■■□□□ 1.3
HLA-DMA-201ENST00000374843 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
HLA-DMA-201ENST00000374843 MTHFSP49914 203 aa23.17■■□□□ 1.3
HLA-DMA-201ENST00000374843 POLKQ9UBT6 870 aa23.17■■□□□ 1.3
HLA-DMA-201ENST00000374843 TOM1O60784 492 aa23.16■■□□□ 1.3
HLA-DMA-201ENST00000374843 CERKQ8TCT0 537 aa23.16■■□□□ 1.3
HLA-DMA-201ENST00000374843 MAP2P11137 1827 aaKnown RBP23.16■■□□□ 1.3
HLA-DMA-201ENST00000374843 PEAK1Q9H792 1746 aa23.16■■□□□ 1.3
HLA-DMA-201ENST00000374843 KIF24Q5T7B8 1368 aa23.15■■□□□ 1.3
HLA-DMA-201ENST00000374843 COL16A1Q07092 1604 aaPredicted RBP23.13■■□□□ 1.29
HLA-DMA-201ENST00000374843 CFAP53Q96M91 514 aa23.13■■□□□ 1.29
HLA-DMA-201ENST00000374843 RTL1A6NKG5 1358 aa23.13■■□□□ 1.29
HLA-DMA-201ENST00000374843 NUTM2GQ5VZR2 741 aa23.12■■□□□ 1.29
HLA-DMA-201ENST00000374843 ABCA3Q99758 1704 aa23.12■■□□□ 1.29
HLA-DMA-201ENST00000374843 KCNH5Q8NCM2 988 aa23.11■■□□□ 1.29
HLA-DMA-201ENST00000374843 EMILIN1Q9Y6C2 1016 aa23.11■■□□□ 1.29
HLA-DMA-201ENST00000374843 COL22A1Q8NFW1 1626 aaPredicted RBP23.11■■□□□ 1.29
HLA-DMA-201ENST00000374843 ABCC6O95255 1503 aa23.1■■□□□ 1.29
HLA-DMA-201ENST00000374843 MAP3K19Q56UN5 1328 aa23.09■■□□□ 1.29
HLA-DMA-201ENST00000374843 LTN1O94822 1766 aa23.09■■□□□ 1.29
HLA-DMA-201ENST00000374843 BLMP54132 1417 aaPredicted RBP23.09■■□□□ 1.29
HLA-DMA-201ENST00000374843 PHLPP1O60346 1717 aa23.09■■□□□ 1.29
HLA-DMA-201ENST00000374843 FBLN1P23142 703 aa23.09■■□□□ 1.29
HLA-DMA-201ENST00000374843 RRS1Q15050 365 aaKnown RBP23.09■■□□□ 1.29
HLA-DMA-201ENST00000374843 FLT4P35916 1363 aa23.09■■□□□ 1.29
HLA-DMA-201ENST00000374843 UBAP1LF5GYI3 381 aa23.08■■□□□ 1.29
HLA-DMA-201ENST00000374843 GCP02774 474 aa23.05■■□□□ 1.28
HLA-DMA-201ENST00000374843 LMOD2Q6P5Q4 547 aa23.05■■□□□ 1.28
HLA-DMA-201ENST00000374843 FAM9BQ8IZU0 186 aa23.05■■□□□ 1.28
HLA-DMA-201ENST00000374843 CPDO75976 1380 aa23.03■■□□□ 1.28
HLA-DMA-201ENST00000374843 RGPD1P0DJD0 1748 aa23.03■■□□□ 1.28
HLA-DMA-201ENST00000374843 WDR43Q15061 677 aaKnown RBP eCLIP23.03■■□□□ 1.28
HLA-DMA-201ENST00000374843 SOX12O15370 315 aa23.02■■□□□ 1.28
HLA-DMA-201ENST00000374843 DIAPH1O60610 1272 aaKnown RBP23.02■■□□□ 1.28
HLA-DMA-201ENST00000374843 ARHGEF25Q86VW2 580 aa23.02■■□□□ 1.28
HLA-DMA-201ENST00000374843 LRRC59Q96AG4 307 aaKnown RBP23.02■■□□□ 1.28
HLA-DMA-201ENST00000374843 PPM1GO15355 546 aaPredicted RBP23■■□□□ 1.27
HLA-DMA-201ENST00000374843 IL13P35225 146 aa23■■□□□ 1.27
HLA-DMA-201ENST00000374843 HOXC9P31274 260 aa22.99■■□□□ 1.27
HLA-DMA-201ENST00000374843 PIP4K2BP78356 416 aa22.99■■□□□ 1.27
HLA-DMA-201ENST00000374843 ADAMTS8Q9UP79 889 aa22.99■■□□□ 1.27
HLA-DMA-201ENST00000374843 NUDCQ9Y266 331 aa22.99■■□□□ 1.27
HLA-DMA-201ENST00000374843 COL18A1P39060 1754 aa22.99■■□□□ 1.27
HLA-DMA-201ENST00000374843 AMPHP49418 695 aa22.98■■□□□ 1.27
HLA-DMA-201ENST00000374843 IP6K1Q92551 441 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms