RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 POLR3GLQ9BT43 218 aa15.75■□□□□ 0.11
HSPG2-202ENST00000374676 SHPRHQ149N8 1683 aa15.75■□□□□ 0.11
HSPG2-202ENST00000374676 A0A1W2PP64 1363 aa15.75■□□□□ 0.11
HSPG2-202ENST00000374676 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
HSPG2-202ENST00000374676 ALS2Q96Q42 1657 aa15.74■□□□□ 0.11
HSPG2-202ENST00000374676 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
HSPG2-202ENST00000374676 ARHGEF10O15013 1369 aa15.74■□□□□ 0.11
HSPG2-202ENST00000374676 PNPLA6Q8IY17 1366 aa15.74■□□□□ 0.11
HSPG2-202ENST00000374676 WASHC2AQ641Q2 1341 aa15.73■□□□□ 0.11
HSPG2-202ENST00000374676 TTC21BQ7Z4L5 1316 aa15.73■□□□□ 0.11
HSPG2-202ENST00000374676 TTC21AQ8NDW8 1320 aa15.72■□□□□ 0.11
HSPG2-202ENST00000374676 COL22A1Q8NFW1 1626 aaPredicted RBP15.72■□□□□ 0.11
HSPG2-202ENST00000374676 SPATA31A6Q5VVP1 1343 aa15.71■□□□□ 0.11
HSPG2-202ENST00000374676 EDC4Q6P2E9 1401 aaKnown RBP15.71■□□□□ 0.11
HSPG2-202ENST00000374676 NRKQ7Z2Y5 1582 aa15.7■□□□□ 0.1
HSPG2-202ENST00000374676 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
HSPG2-202ENST00000374676 ABTB2Q8N961 1025 aa15.7■□□□□ 0.1
HSPG2-202ENST00000374676 CARD14Q9BXL6 1004 aa15.69■□□□□ 0.1
HSPG2-202ENST00000374676 PANK3Q9H999 370 aa15.69■□□□□ 0.1
HSPG2-202ENST00000374676 NLRP13Q86W25 1043 aa15.67■□□□□ 0.1
HSPG2-202ENST00000374676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.67■□□□□ 0.1
HSPG2-202ENST00000374676 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
HSPG2-202ENST00000374676 USP31Q70CQ4 1352 aa15.66■□□□□ 0.1
HSPG2-202ENST00000374676 NLRP6P59044 892 aa15.66■□□□□ 0.1
HSPG2-202ENST00000374676 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
HSPG2-202ENST00000374676 NUTM2GQ5VZR2 741 aa15.65■□□□□ 0.1
HSPG2-202ENST00000374676 NSD3Q9BZ95 1437 aa15.65■□□□□ 0.1
HSPG2-202ENST00000374676 USP19O94966 1318 aa15.65■□□□□ 0.1
HSPG2-202ENST00000374676 USP54Q70EL1 1684 aa15.64■□□□□ 0.09
HSPG2-202ENST00000374676 NME9Q86XW9 330 aa15.64■□□□□ 0.09
HSPG2-202ENST00000374676 CABLES1Q8TDN4 633 aa15.64■□□□□ 0.09
HSPG2-202ENST00000374676 CRYBG1Q9Y4K1 1723 aa15.64■□□□□ 0.09
HSPG2-202ENST00000374676 NUTM2BA6NNL0 878 aaPredicted RBP15.63■□□□□ 0.09
HSPG2-202ENST00000374676 NUTM2EB1AL46 878 aaPredicted RBP15.63■□□□□ 0.09
HSPG2-202ENST00000374676 FYB1O15117 783 aa15.63■□□□□ 0.09
HSPG2-202ENST00000374676 NUTM2AQ8IVF1 878 aaPredicted RBP15.63■□□□□ 0.09
HSPG2-202ENST00000374676 ABCA3Q99758 1704 aa15.63■□□□□ 0.09
HSPG2-202ENST00000374676 ZNF316A6NFI3 1004 aaPredicted RBP15.62■□□□□ 0.09
HSPG2-202ENST00000374676 PER1O15534 1290 aaPredicted RBP15.62■□□□□ 0.09
HSPG2-202ENST00000374676 MARF1Q9Y4F3 1742 aaKnown RBP15.62■□□□□ 0.09
HSPG2-202ENST00000374676 CGNL1Q0VF96 1302 aa15.62■□□□□ 0.09
HSPG2-202ENST00000374676 LRP6O75581 1613 aa15.61■□□□□ 0.09
HSPG2-202ENST00000374676 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
HSPG2-202ENST00000374676 KNSTRNQ9Y448 316 aa15.61■□□□□ 0.09
HSPG2-202ENST00000374676 KIF20BQ96Q89 1820 aa15.61■□□□□ 0.09
HSPG2-202ENST00000374676 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
HSPG2-202ENST00000374676 SLIT3O75094 1523 aa15.6■□□□□ 0.09
HSPG2-202ENST00000374676 GCP02774 474 aa15.6■□□□□ 0.09
HSPG2-202ENST00000374676 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
HSPG2-202ENST00000374676 KCNH5Q8NCM2 988 aa15.6■□□□□ 0.09
HSPG2-202ENST00000374676 COG3Q96JB2 828 aa15.6■□□□□ 0.09
HSPG2-202ENST00000374676 OVOS2A0A0J9YW53 1432 aa15.6■□□□□ 0.09
HSPG2-202ENST00000374676 OVOS2Q6IE36 1432 aa15.6■□□□□ 0.09
HSPG2-202ENST00000374676 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
HSPG2-202ENST00000374676 GGNBP2Q9H3C7 697 aa15.59■□□□□ 0.09
HSPG2-202ENST00000374676 ADAMTS2O95450 1211 aa15.58■□□□□ 0.08
HSPG2-202ENST00000374676 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
HSPG2-202ENST00000374676 MEX3CQ5U5Q3 659 aaKnown RBP15.57■□□□□ 0.08
HSPG2-202ENST00000374676 CPDO75976 1380 aa15.57■□□□□ 0.08
HSPG2-202ENST00000374676 NSD2O96028 1365 aa15.57■□□□□ 0.08
HSPG2-202ENST00000374676 NPC1L1Q9UHC9 1359 aa15.56■□□□□ 0.08
HSPG2-202ENST00000374676 ANKRD26Q9UPS8 1709 aa15.56■□□□□ 0.08
HSPG2-202ENST00000374676 NFAT5O94916 1531 aa15.55■□□□□ 0.08
HSPG2-202ENST00000374676 FAM83GA6ND36 823 aa15.55■□□□□ 0.08
HSPG2-202ENST00000374676 ZC3H6P61129 1189 aaKnown RBP15.55■□□□□ 0.08
HSPG2-202ENST00000374676 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
HSPG2-202ENST00000374676 NGLY1Q96IV0 654 aa15.55■□□□□ 0.08
HSPG2-202ENST00000374676 KIAA0232Q92628 1395 aa15.54■□□□□ 0.08
HSPG2-202ENST00000374676 ARHGEF25Q86VW2 580 aa15.54■□□□□ 0.08
HSPG2-202ENST00000374676 FNBP4Q8N3X1 1017 aaPredicted RBP15.54■□□□□ 0.08
HSPG2-202ENST00000374676 C8orf37Q96NL8 207 aa15.54■□□□□ 0.08
HSPG2-202ENST00000374676 PRDM11Q9NQV5 511 aa15.53■□□□□ 0.08
HSPG2-202ENST00000374676 COL14A1Q05707 1796 aaKnown RBP15.53■□□□□ 0.08
HSPG2-202ENST00000374676 SLIT2O94813 1529 aa15.52■□□□□ 0.07
HSPG2-202ENST00000374676 SOX12O15370 315 aa15.51■□□□□ 0.07
HSPG2-202ENST00000374676 MORC1Q86VD1 984 aa15.51■□□□□ 0.07
HSPG2-202ENST00000374676 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
HSPG2-202ENST00000374676 NWD2Q9ULI1 1742 aa15.51■□□□□ 0.07
HSPG2-202ENST00000374676 AATKQ6ZMQ8 1374 aa15.5■□□□□ 0.07
HSPG2-202ENST00000374676 AFF2P51816 1311 aa15.5■□□□□ 0.07
HSPG2-202ENST00000374676 LTN1O94822 1766 aa15.5■□□□□ 0.07
HSPG2-202ENST00000374676 COL18A1P39060 1754 aa15.5■□□□□ 0.07
HSPG2-202ENST00000374676 CHRNA2Q15822 529 aa15.5■□□□□ 0.07
HSPG2-202ENST00000374676 PLCH1Q4KWH8 1693 aa15.49■□□□□ 0.07
HSPG2-202ENST00000374676 ZNF772Q68DY9 489 aaPredicted RBP15.49■□□□□ 0.07
HSPG2-202ENST00000374676 ABCC6O95255 1503 aa15.48■□□□□ 0.07
HSPG2-202ENST00000374676 LMO7Q8WWI1 1683 aa15.48■□□□□ 0.07
HSPG2-202ENST00000374676 BCL9LQ86UU0 1499 aa15.48■□□□□ 0.07
HSPG2-202ENST00000374676 FBLN1P23142 703 aa15.48■□□□□ 0.07
HSPG2-202ENST00000374676 CC2D1BQ5T0F9 858 aaKnown RBP15.48■□□□□ 0.07
HSPG2-202ENST00000374676 UNC5CLQ8IV45 518 aa15.48■□□□□ 0.07
HSPG2-202ENST00000374676 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
HSPG2-202ENST00000374676 BTG4Q9NY30 223 aa15.48■□□□□ 0.07
HSPG2-202ENST00000374676 RGS17Q9UGC6 210 aaPredicted RBP15.48■□□□□ 0.07
HSPG2-202ENST00000374676 USP21Q9UK80 565 aa15.48■□□□□ 0.07
HSPG2-202ENST00000374676 MAP3K19Q56UN5 1328 aa15.47■□□□□ 0.07
HSPG2-202ENST00000374676 IP6K1Q92551 441 aa15.47■□□□□ 0.07
HSPG2-202ENST00000374676 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.47■□□□□ 0.07
HSPG2-202ENST00000374676 CAMTA1Q9Y6Y1 1673 aa15.47■□□□□ 0.07
HSPG2-202ENST00000374676 KIF24Q5T7B8 1368 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms