RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.96□□□□□ -1.29
SRRM1-202ENST00000374389 PUS7Q96PZ0 661 aaKnown RBP6.96□□□□□ -1.29
SRRM1-202ENST00000374389 CHMP4AQ9BY43 222 aa6.96□□□□□ -1.29
SRRM1-202ENST00000374389 ZBTB47Q9UFB7 747 aaPredicted RBP6.96□□□□□ -1.29
SRRM1-202ENST00000374389 TNNQ9UQP3 1299 aa6.96□□□□□ -1.29
SRRM1-202ENST00000374389 TMEM131LA2VDJ0 1609 aa6.96□□□□□ -1.29
SRRM1-202ENST00000374389 MINK1Q8N4C8 1332 aaPredicted RBP6.96□□□□□ -1.3
SRRM1-202ENST00000374389 PANK1Q8TE04 598 aa6.96□□□□□ -1.3
SRRM1-202ENST00000374389 CD163L1Q9NR16 1453 aa6.96□□□□□ -1.3
SRRM1-202ENST00000374389 ABCC11Q96J66 1382 aa6.96□□□□□ -1.3
SRRM1-202ENST00000374389 IGHDP01880 384 aa6.96□□□□□ -1.3
SRRM1-202ENST00000374389 DHX37Q8IY37 1157 aaKnown RBP6.96□□□□□ -1.3
SRRM1-202ENST00000374389 NGEFQ8N5V2 710 aa6.96□□□□□ -1.3
SRRM1-202ENST00000374389 PRAM1Q96QH2 718 aa6.96□□□□□ -1.3
SRRM1-202ENST00000374389 GGNBP2Q9H3C7 697 aa6.96□□□□□ -1.3
SRRM1-202ENST00000374389 MYO5BQ9ULV0 1848 aa6.96□□□□□ -1.3
SRRM1-202ENST00000374389 PREX1Q8TCU6 1659 aa6.95□□□□□ -1.3
SRRM1-202ENST00000374389 NLRP1Q9C000 1473 aa6.95□□□□□ -1.3
SRRM1-202ENST00000374389 SPATA31D1Q6ZQQ2 1576 aa6.95□□□□□ -1.3
SRRM1-202ENST00000374389 SRPK2P78362 688 aaKnown RBP6.95□□□□□ -1.3
SRRM1-202ENST00000374389 MKRN4PQ13434 485 aaPredicted RBP6.95□□□□□ -1.3
SRRM1-202ENST00000374389 C8orf34Q49A92 452 aa6.95□□□□□ -1.3
SRRM1-202ENST00000374389 COG6Q9Y2V7 657 aa6.95□□□□□ -1.3
SRRM1-202ENST00000374389 YTHDC2Q9H6S0 1430 aaKnown RBP6.95□□□□□ -1.3
SRRM1-202ENST00000374389 NSD2O96028 1365 aa6.95□□□□□ -1.3
SRRM1-202ENST00000374389 RLBP1P12271 317 aa6.94□□□□□ -1.3
SRRM1-202ENST00000374389 RARSP54136 660 aaKnown RBP6.94□□□□□ -1.3
SRRM1-202ENST00000374389 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
SRRM1-202ENST00000374389 COL3A1P02461 1466 aaPredicted RBP6.94□□□□□ -1.3
SRRM1-202ENST00000374389 U2AF1L5P0DN76 240 aaPredicted RBP6.94□□□□□ -1.3
SRRM1-202ENST00000374389 RGS3P49796 1198 aa6.94□□□□□ -1.3
SRRM1-202ENST00000374389 U2AF1Q01081 240 aaKnown RBP eCLIP6.94□□□□□ -1.31e-12■■□□□ 14.4
SRRM1-202ENST00000374389 FAM69CQ0P6D2 419 aa6.94□□□□□ -1.3
SRRM1-202ENST00000374389 FYB1O15117 783 aa6.93□□□□□ -1.3
SRRM1-202ENST00000374389 PDE3AQ14432 1141 aa6.93□□□□□ -1.3
SRRM1-202ENST00000374389 FRAT1Q92837 279 aaPredicted RBP6.93□□□□□ -1.3
SRRM1-202ENST00000374389 CFAP53Q96M91 514 aa6.93□□□□□ -1.3
SRRM1-202ENST00000374389 ADGRB2O60241 1585 aa6.93□□□□□ -1.3
SRRM1-202ENST00000374389 ARHGEF40Q8TER5 1519 aa6.93□□□□□ -1.3
SRRM1-202ENST00000374389 CCDC27Q2M243 656 aa6.93□□□□□ -1.3
SRRM1-202ENST00000374389 WDR63Q8IWG1 891 aa6.93□□□□□ -1.3
SRRM1-202ENST00000374389 ALKQ9UM73 1620 aa6.93□□□□□ -1.3
SRRM1-202ENST00000374389 CLUAP1Q96AJ1 413 aa6.92□□□□□ -1.3
SRRM1-202ENST00000374389 PLEKHF1Q96S99 279 aa6.92□□□□□ -1.3
SRRM1-202ENST00000374389 LAS1LQ9Y4W2 734 aaKnown RBP6.92□□□□□ -1.3
SRRM1-202ENST00000374389 DIP2BQ9P265 1576 aa6.92□□□□□ -1.3
SRRM1-202ENST00000374389 FAM161AQ3B820 660 aa6.92□□□□□ -1.3
SRRM1-202ENST00000374389 POGKQ9P215 609 aa6.92□□□□□ -1.3
SRRM1-202ENST00000374389 ATAD2Q6PL18 1390 aa6.92□□□□□ -1.3
SRRM1-202ENST00000374389 NINLQ9Y2I6 1382 aa6.92□□□□□ -1.3
SRRM1-202ENST00000374389 FBLN1P23142 703 aa6.92□□□□□ -1.3
SRRM1-202ENST00000374389 CANXP27824 592 aaKnown RBP6.92□□□□□ -1.3
SRRM1-202ENST00000374389 DEKP35659 375 aaKnown RBP6.92□□□□□ -1.3
SRRM1-202ENST00000374389 TSR2Q969E8 191 aaKnown RBP6.92□□□□□ -1.3
SRRM1-202ENST00000374389 CDK19Q9BWU1 502 aa6.92□□□□□ -1.3
SRRM1-202ENST00000374389 A2ML1A8K2U0 1454 aa6.91□□□□□ -1.3
SRRM1-202ENST00000374389 U2SURPO15042 1029 aaKnown RBP6.91□□□□□ -1.3
SRRM1-202ENST00000374389 WAPLQ7Z5K2 1190 aa6.91□□□□□ -1.3
SRRM1-202ENST00000374389 BCL11BQ9C0K0 894 aaPredicted RBP6.91□□□□□ -1.3
SRRM1-202ENST00000374389 CABP1Q9NZU7 370 aa6.91□□□□□ -1.3
SRRM1-202ENST00000374389 TRIM35Q9UPQ4 493 aa6.91□□□□□ -1.3
SRRM1-202ENST00000374389 PCDHB15Q9Y5E8 787 aa6.91□□□□□ -1.3
SRRM1-202ENST00000374389 SLC4A3P48751 1232 aa6.91□□□□□ -1.3
SRRM1-202ENST00000374389 CLTCQ00610 1675 aaKnown RBP6.91□□□□□ -1.3
SRRM1-202ENST00000374389 MLECQ14165 292 aa6.9□□□□□ -1.3
SRRM1-202ENST00000374389 TMPOP42166 694 aaKnown RBP6.9□□□□□ -1.3
SRRM1-202ENST00000374389 TERF2IPQ9NYB0 399 aa6.9□□□□□ -1.3
SRRM1-202ENST00000374389 MED14O60244 1454 aa6.9□□□□□ -1.31
SRRM1-202ENST00000374389 STAG3Q9UJ98 1225 aa6.9□□□□□ -1.31
SRRM1-202ENST00000374389 AGLP35573 1532 aa6.89□□□□□ -1.31
SRRM1-202ENST00000374389 PNPLA6Q8IY17 1366 aa6.89□□□□□ -1.31
SRRM1-202ENST00000374389 RIMS2Q9UQ26 1411 aa6.89□□□□□ -1.31
SRRM1-202ENST00000374389 USP19O94966 1318 aa6.89□□□□□ -1.31
SRRM1-202ENST00000374389 EXOSC9Q06265 439 aaKnown RBP6.89□□□□□ -1.31
SRRM1-202ENST00000374389 MYH16Q9H6N6 1097 aa6.89□□□□□ -1.31
SRRM1-202ENST00000374389 REREQ9P2R6 1566 aa6.89□□□□□ -1.31
SRRM1-202ENST00000374389 TSPOAP1O95153 1857 aa6.88□□□□□ -1.31
SRRM1-202ENST00000374389 SEC24BO95487 1268 aa6.88□□□□□ -1.31
SRRM1-202ENST00000374389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
SRRM1-202ENST00000374389 SETD1AO15047 1707 aaKnown RBP6.88□□□□□ -1.31
SRRM1-202ENST00000374389 METP08581 1390 aa6.88□□□□□ -1.31
SRRM1-202ENST00000374389 ATXN8OSP0DMR3 200 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 HDGFL2Q7Z4V5 671 aaPredicted RBP6.87□□□□□ -1.31
SRRM1-202ENST00000374389 SSH1Q8WYL5 1049 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 NCKAP5LQ9HCH0 1330 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 DLC1Q96QB1 1528 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 KIF13AQ9H1H9 1805 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 DIAPH1O60610 1272 aaKnown RBP6.87□□□□□ -1.31
SRRM1-202ENST00000374389 REM2Q8IYK8 340 aaPredicted RBP6.87□□□□□ -1.31
SRRM1-202ENST00000374389 DDRGK1Q96HY6 314 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 POLKQ9UBT6 870 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 ZRANB1Q9UGI0 708 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 ANKRD26Q9UPS8 1709 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 RIPK4P57078 832 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 MVPQ14764 893 aaKnown RBP6.87□□□□□ -1.31
SRRM1-202ENST00000374389 MAPK8IP3Q9UPT6 1336 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 NRXN3Q9Y4C0 1643 aa6.87□□□□□ -1.31
SRRM1-202ENST00000374389 LRRC7Q96NW7 1537 aa6.86□□□□□ -1.31
SRRM1-202ENST00000374389 NEFMP07197 916 aa6.86□□□□□ -1.31
SRRM1-202ENST00000374389 TRIM27P14373 513 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms