RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
PTPN20-202ENST00000374339 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
PTPN20-202ENST00000374339 TMEM94Q12767 1356 aa13.11□□□□□ -0.31
PTPN20-202ENST00000374339 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
PTPN20-202ENST00000374339 POLR3AO14802 1390 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-202ENST00000374339 ACEP12821 1306 aa13.1□□□□□ -0.31
PTPN20-202ENST00000374339 NUTM2FA1L443 756 aa13.09□□□□□ -0.31
PTPN20-202ENST00000374339 MORC1Q86VD1 984 aa13.09□□□□□ -0.31
PTPN20-202ENST00000374339 MSH6P52701 1360 aa13.09□□□□□ -0.31
PTPN20-202ENST00000374339 KIF1AQ12756 1690 aa13.09□□□□□ -0.31
PTPN20-202ENST00000374339 XIRP1Q702N8 1843 aaKnown RBP13.09□□□□□ -0.31
PTPN20-202ENST00000374339 ATF3P18847 181 aa13.08□□□□□ -0.31
PTPN20-202ENST00000374339 USP6P35125 1406 aa13.08□□□□□ -0.31
PTPN20-202ENST00000374339 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.31
PTPN20-202ENST00000374339 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.31
PTPN20-202ENST00000374339 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
PTPN20-202ENST00000374339 PPP2R1AP30153 589 aa13.07□□□□□ -0.32
PTPN20-202ENST00000374339 ZNF335Q9H4Z2 1342 aaPredicted RBP13.07□□□□□ -0.32
PTPN20-202ENST00000374339 FYB1O15117 783 aa13.07□□□□□ -0.32
PTPN20-202ENST00000374339 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
PTPN20-202ENST00000374339 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
PTPN20-202ENST00000374339 TTC21AQ8NDW8 1320 aa13.06□□□□□ -0.32
PTPN20-202ENST00000374339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN20-202ENST00000374339 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
PTPN20-202ENST00000374339 PMFBP1Q8TBY8 1022 aa13.05□□□□□ -0.32
PTPN20-202ENST00000374339 YTHDC1Q96MU7 727 aaKnown RBP13.05□□□□□ -0.32
PTPN20-202ENST00000374339 GGNBP2Q9H3C7 697 aa13.05□□□□□ -0.32
PTPN20-202ENST00000374339 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
PTPN20-202ENST00000374339 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
PTPN20-202ENST00000374339 ESCO1Q5FWF5 840 aa13.04□□□□□ -0.32
PTPN20-202ENST00000374339 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-202ENST00000374339 TTC21BQ7Z4L5 1316 aa13.04□□□□□ -0.32
PTPN20-202ENST00000374339 MST1RQ04912 1400 aa13.03□□□□□ -0.32
PTPN20-202ENST00000374339 COG3Q96JB2 828 aa13.03□□□□□ -0.32
PTPN20-202ENST00000374339 FAM9BQ8IZU0 186 aa13.02□□□□□ -0.33
PTPN20-202ENST00000374339 PNISRQ8TF01 805 aaKnown RBP13.02□□□□□ -0.33
PTPN20-202ENST00000374339 USP54Q70EL1 1684 aa13.02□□□□□ -0.33
PTPN20-202ENST00000374339 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-202ENST00000374339 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-202ENST00000374339 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-202ENST00000374339 NME9Q86XW9 330 aa13.01□□□□□ -0.33
PTPN20-202ENST00000374339 CFAP53Q96M91 514 aa13.01□□□□□ -0.33
PTPN20-202ENST00000374339 PIK3C2AO00443 1686 aa13□□□□□ -0.33
PTPN20-202ENST00000374339 INSRP06213 1382 aa13□□□□□ -0.33
PTPN20-202ENST00000374339 PSME1Q06323 249 aa13□□□□□ -0.33
PTPN20-202ENST00000374339 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
PTPN20-202ENST00000374339 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
PTPN20-202ENST00000374339 AATKQ6ZMQ8 1374 aa12.99□□□□□ -0.33
PTPN20-202ENST00000374339 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
PTPN20-202ENST00000374339 WDR43Q15061 677 aaKnown RBP eCLIP12.98□□□□□ -0.33
PTPN20-202ENST00000374339 ORAI2Q96SN7 254 aa12.98□□□□□ -0.33
PTPN20-202ENST00000374339 MAP2P11137 1827 aaKnown RBP12.98□□□□□ -0.33
PTPN20-202ENST00000374339 MTHFSP49914 203 aa12.97□□□□□ -0.33
PTPN20-202ENST00000374339 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
PTPN20-202ENST00000374339 TRPM3Q9HCF6 1732 aaPredicted RBP12.97□□□□□ -0.33
PTPN20-202ENST00000374339 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
PTPN20-202ENST00000374339 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.33
PTPN20-202ENST00000374339 NPHP3Q7Z494 1330 aa12.96□□□□□ -0.34
PTPN20-202ENST00000374339 FOXO3O43524 673 aa12.95□□□□□ -0.34
PTPN20-202ENST00000374339 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
PTPN20-202ENST00000374339 SLAIN2Q9P270 581 aa12.95□□□□□ -0.34
PTPN20-202ENST00000374339 SHPRHQ149N8 1683 aa12.95□□□□□ -0.34
PTPN20-202ENST00000374339 MARF1Q9Y4F3 1742 aaKnown RBP12.95□□□□□ -0.34
PTPN20-202ENST00000374339 CDK12Q9NYV4 1490 aaPredicted RBP12.94□□□□□ -0.34
PTPN20-202ENST00000374339 HNRNPUQ00839 825 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTPN20-202ENST00000374339 ABCB7O75027 752 aa12.94□□□□□ -0.34
PTPN20-202ENST00000374339 NLRP6P59044 892 aa12.94□□□□□ -0.34
PTPN20-202ENST00000374339 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
PTPN20-202ENST00000374339 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
PTPN20-202ENST00000374339 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
PTPN20-202ENST00000374339 BLMP54132 1417 aaPredicted RBP12.93□□□□□ -0.34
PTPN20-202ENST00000374339 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
PTPN20-202ENST00000374339 NUDCQ9Y266 331 aa12.93□□□□□ -0.34
PTPN20-202ENST00000374339 SBNO1A3KN83 1393 aa12.92□□□□□ -0.34
PTPN20-202ENST00000374339 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
PTPN20-202ENST00000374339 BRINP3Q76B58 766 aa12.92□□□□□ -0.34
PTPN20-202ENST00000374339 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
PTPN20-202ENST00000374339 ADAMTS8Q9UP79 889 aa12.91□□□□□ -0.34
PTPN20-202ENST00000374339 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
PTPN20-202ENST00000374339 PXDNQ92626 1479 aa12.9□□□□□ -0.34
PTPN20-202ENST00000374339 NHSL1Q5SYE7 1610 aa12.9□□□□□ -0.34
PTPN20-202ENST00000374339 PPM1GO15355 546 aaPredicted RBP12.9□□□□□ -0.34
PTPN20-202ENST00000374339 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
PTPN20-202ENST00000374339 KCNH5Q8NCM2 988 aa12.9□□□□□ -0.34
PTPN20-202ENST00000374339 ZBED9Q6R2W3 1325 aa12.89□□□□□ -0.35
PTPN20-202ENST00000374339 TNS3Q68CZ2 1445 aa12.89□□□□□ -0.35
PTPN20-202ENST00000374339 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
PTPN20-202ENST00000374339 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
PTPN20-202ENST00000374339 ARHGEF10O15013 1369 aa12.89□□□□□ -0.35
PTPN20-202ENST00000374339 SLIT3O75094 1523 aa12.88□□□□□ -0.35
PTPN20-202ENST00000374339 LTN1O94822 1766 aa12.88□□□□□ -0.35
PTPN20-202ENST00000374339 FLT4P35916 1363 aa12.88□□□□□ -0.35
PTPN20-202ENST00000374339 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
PTPN20-202ENST00000374339 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
PTPN20-202ENST00000374339 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
PTPN20-202ENST00000374339 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
PTPN20-202ENST00000374339 NFAT5O94916 1531 aa12.88□□□□□ -0.35
PTPN20-202ENST00000374339 IQSEC2Q5JU85 1478 aa12.87□□□□□ -0.35
PTPN20-202ENST00000374339 RTL1A6NKG5 1358 aa12.87□□□□□ -0.35
PTPN20-202ENST00000374339 PEAK1Q9H792 1746 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms