RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 NGDNQ8NEJ9 315 aaKnown RBP20.7■□□□□ 0.9
UBXN11-207ENST00000374223 ARHGEF10O15013 1369 aa20.69■□□□□ 0.9
UBXN11-207ENST00000374223 TRPM1Q7Z4N2 1603 aa20.69■□□□□ 0.9
UBXN11-207ENST00000374223 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
UBXN11-207ENST00000374223 NUTM2GQ5VZR2 741 aa20.68■□□□□ 0.9
UBXN11-207ENST00000374223 GPRASP1Q5JY77 1395 aa20.67■□□□□ 0.9
UBXN11-207ENST00000374223 BLMP54132 1417 aaPredicted RBP20.67■□□□□ 0.9
UBXN11-207ENST00000374223 PHRF1Q9P1Y6 1649 aaKnown RBP20.66■□□□□ 0.9
UBXN11-207ENST00000374223 EIF3AQ14152 1382 aaKnown RBP20.66■□□□□ 0.9
UBXN11-207ENST00000374223 CABP2Q9NPB3 220 aa20.65■□□□□ 0.9
UBXN11-207ENST00000374223 ACEP12821 1306 aa20.65■□□□□ 0.9
UBXN11-207ENST00000374223 SRCAPQ6ZRS2 3230 aa20.64■□□□□ 0.9
UBXN11-207ENST00000374223 VPS72Q15906 364 aa20.64■□□□□ 0.89
UBXN11-207ENST00000374223 COL14A1Q05707 1796 aaKnown RBP20.64■□□□□ 0.89
UBXN11-207ENST00000374223 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
UBXN11-207ENST00000374223 BTG4Q9NY30 223 aa20.63■□□□□ 0.89
UBXN11-207ENST00000374223 CCDC9Q9Y3X0 531 aaKnown RBP20.62■□□□□ 0.89
UBXN11-207ENST00000374223 POLR3AO14802 1390 aaPredicted RBP20.61■□□□□ 0.89
UBXN11-207ENST00000374223 SEPT12Q8IYM1 358 aa20.61■□□□□ 0.89
UBXN11-207ENST00000374223 CENPJQ9HC77 1338 aaPredicted RBP20.61■□□□□ 0.89
UBXN11-207ENST00000374223 ONECUT3O60422 494 aaPredicted RBP20.6■□□□□ 0.89
UBXN11-207ENST00000374223 CHRNA2Q15822 529 aa20.6■□□□□ 0.89
UBXN11-207ENST00000374223 CCDC61Q9Y6R9 512 aa20.6■□□□□ 0.89
UBXN11-207ENST00000374223 PLEKHG3A1L390 1219 aa20.59■□□□□ 0.89
UBXN11-207ENST00000374223 SF3B2Q13435 895 aaKnown RBP20.59■□□□□ 0.89
UBXN11-207ENST00000374223 PPIP5K1Q6PFW1 1433 aa20.58■□□□□ 0.88
UBXN11-207ENST00000374223 KIAA0232Q92628 1395 aa20.58■□□□□ 0.88
UBXN11-207ENST00000374223 ZC3H6P61129 1189 aaKnown RBP20.57■□□□□ 0.88
UBXN11-207ENST00000374223 SRPK2P78362 688 aaKnown RBP20.57■□□□□ 0.88
UBXN11-207ENST00000374223 FAM98CQ17RN3 349 aaKnown RBP20.56■□□□□ 0.88
UBXN11-207ENST00000374223 NRKQ7Z2Y5 1582 aa20.56■□□□□ 0.88
UBXN11-207ENST00000374223 FAM182BQ5T319 152 aa20.55■□□□□ 0.88
UBXN11-207ENST00000374223 KRT27Q7Z3Y8 459 aa20.55■□□□□ 0.88
UBXN11-207ENST00000374223 DEFB132Q7Z7B7 95 aa20.54■□□□□ 0.88
UBXN11-207ENST00000374223 PRDM11Q9NQV5 511 aa20.53■□□□□ 0.88
UBXN11-207ENST00000374223 CABP1Q9NZU7 370 aa20.53■□□□□ 0.88
UBXN11-207ENST00000374223 ROCK2O75116 1388 aaKnown RBP20.51■□□□□ 0.87
UBXN11-207ENST00000374223 SPATA31A5Q5VU36 1347 aa20.51■□□□□ 0.87
UBXN11-207ENST00000374223 SPATA31A7Q8IWB4 1347 aa20.51■□□□□ 0.87
UBXN11-207ENST00000374223 THSD7AQ9UPZ6 1657 aa20.51■□□□□ 0.87
UBXN11-207ENST00000374223 CAMTA1Q9Y6Y1 1673 aa20.51■□□□□ 0.87
UBXN11-207ENST00000374223 ABTB2Q8N961 1025 aa20.51■□□□□ 0.87
UBXN11-207ENST00000374223 PIK3C2AO00443 1686 aa20.5■□□□□ 0.87
UBXN11-207ENST00000374223 LMO7Q8WWI1 1683 aa20.5■□□□□ 0.87
UBXN11-207ENST00000374223 AKAP12Q02952 1782 aa20.5■□□□□ 0.87
UBXN11-207ENST00000374223 STRN4Q9NRL3 753 aa20.5■□□□□ 0.87
UBXN11-207ENST00000374223 A0A0G2JS52 829 aa20.49■□□□□ 0.87
UBXN11-207ENST00000374223 MYT1Q01538 1121 aa20.49■□□□□ 0.87
UBXN11-207ENST00000374223 USP19O94966 1318 aa20.48■□□□□ 0.87
UBXN11-207ENST00000374223 BAG6P46379 1132 aa20.48■□□□□ 0.87
UBXN11-207ENST00000374223 LRP5O75197 1615 aa20.48■□□□□ 0.87
UBXN11-207ENST00000374223 RGPD5Q99666 1765 aa20.47■□□□□ 0.87
UBXN11-207ENST00000374223 USP6P35125 1406 aa20.47■□□□□ 0.87
UBXN11-207ENST00000374223 SSH2Q76I76 1423 aa20.47■□□□□ 0.87
UBXN11-207ENST00000374223 SPATA31A1Q5TZJ5 1347 aa20.45■□□□□ 0.86
UBXN11-207ENST00000374223 COL18A1P39060 1754 aa20.44■□□□□ 0.86
UBXN11-207ENST00000374223 LARP1Q6PKG0 1096 aaKnown RBP20.44■□□□□ 0.86
UBXN11-207ENST00000374223 USP35Q9P2H5 1018 aa20.44■□□□□ 0.86
UBXN11-207ENST00000374223 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
UBXN11-207ENST00000374223 RGPD1P0DJD0 1748 aa20.43■□□□□ 0.86
UBXN11-207ENST00000374223 GCP02774 474 aa20.43■□□□□ 0.86
UBXN11-207ENST00000374223 TNS1Q9HBL0 1735 aaKnown RBP20.42■□□□□ 0.86
UBXN11-207ENST00000374223 ZBTB7CA1YPR0 619 aa20.42■□□□□ 0.86
UBXN11-207ENST00000374223 SLIT3O75094 1523 aa20.41■□□□□ 0.86
UBXN11-207ENST00000374223 NLRP6P59044 892 aa20.4■□□□□ 0.86
UBXN11-207ENST00000374223 NLRP13Q86W25 1043 aa20.4■□□□□ 0.86
UBXN11-207ENST00000374223 CPDO75976 1380 aa20.4■□□□□ 0.86
UBXN11-207ENST00000374223 MON2Q7Z3U7 1717 aa20.39■□□□□ 0.85
UBXN11-207ENST00000374223 CARD11Q9BXL7 1154 aa20.39■□□□□ 0.85
UBXN11-207ENST00000374223 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
UBXN11-207ENST00000374223 DISP2A7MBM2 1401 aa20.38■□□□□ 0.85
UBXN11-207ENST00000374223 EVA1CP58658 441 aa20.37■□□□□ 0.85
UBXN11-207ENST00000374223 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
UBXN11-207ENST00000374223 AXIN2Q9Y2T1 843 aa20.37■□□□□ 0.85
UBXN11-207ENST00000374223 TONSLQ96HA7 1378 aa20.37■□□□□ 0.85
UBXN11-207ENST00000374223 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
UBXN11-207ENST00000374223 COL5A2P05997 1499 aaPredicted RBP20.37■□□□□ 0.85
UBXN11-207ENST00000374223 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
UBXN11-207ENST00000374223 SOX12O15370 315 aa20.36■□□□□ 0.85
UBXN11-207ENST00000374223 PSDA5PKW4 1024 aaPredicted RBP20.35■□□□□ 0.85
UBXN11-207ENST00000374223 EN1Q05925 392 aaPredicted RBP20.35■□□□□ 0.85
UBXN11-207ENST00000374223 WNK3Q9BYP7 1800 aa20.32■□□□□ 0.84
UBXN11-207ENST00000374223 BRD4O60885 1362 aaPredicted RBP20.32■□□□□ 0.84
UBXN11-207ENST00000374223 KTN1Q86UP2 1357 aaKnown RBP20.32■□□□□ 0.84
UBXN11-207ENST00000374223 NFAT5O94916 1531 aa20.31■□□□□ 0.84
UBXN11-207ENST00000374223 TRIM37O94972 964 aa20.31■□□□□ 0.84
UBXN11-207ENST00000374223 SLC12A5Q9H2X9 1139 aa20.31■□□□□ 0.84
UBXN11-207ENST00000374223 PARP4Q9UKK3 1724 aaKnown RBP20.31■□□□□ 0.84
UBXN11-207ENST00000374223 FAM196AQ6ZSG2 479 aa20.3■□□□□ 0.84
UBXN11-207ENST00000374223 BARGINQ6ZT62 677 aa20.3■□□□□ 0.84
UBXN11-207ENST00000374223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.3■□□□□ 0.84
UBXN11-207ENST00000374223 TCP11L2Q8N4U5 519 aa20.3■□□□□ 0.84
UBXN11-207ENST00000374223 AATKQ6ZMQ8 1374 aa20.3■□□□□ 0.84
UBXN11-207ENST00000374223 SBNO2Q9Y2G9 1366 aa20.3■□□□□ 0.84
UBXN11-207ENST00000374223 NME9Q86XW9 330 aa20.29■□□□□ 0.84
UBXN11-207ENST00000374223 SBF2Q86WG5 1849 aa20.29■□□□□ 0.84
UBXN11-207ENST00000374223 LRRC37A3O60309 1634 aa20.29■□□□□ 0.84
UBXN11-207ENST00000374223 EZH2Q15910 746 aaKnown RBP20.28■□□□□ 0.84
UBXN11-207ENST00000374223 ARHGEF25Q86VW2 580 aa20.28■□□□□ 0.84
UBXN11-207ENST00000374223 TESK2Q96S53 571 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms