RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 PIK3C2AO00443 1686 aa17.54■□□□□ 0.4
GJB1-202ENST00000374022 PXDNQ92626 1479 aa17.54■□□□□ 0.4
GJB1-202ENST00000374022 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
GJB1-202ENST00000374022 AHDC1Q5TGY3 1603 aaPredicted RBP17.53■□□□□ 0.4
GJB1-202ENST00000374022 DDX17Q92841 729 aaKnown RBP17.53■□□□□ 0.4
GJB1-202ENST00000374022 ALS2Q96Q42 1657 aa17.53■□□□□ 0.4
GJB1-202ENST00000374022 CGNL1Q0VF96 1302 aa17.53■□□□□ 0.4
GJB1-202ENST00000374022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.53■□□□□ 0.4
GJB1-202ENST00000374022 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
GJB1-202ENST00000374022 XPCQ01831 940 aaPredicted RBP17.52■□□□□ 0.4
GJB1-202ENST00000374022 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
GJB1-202ENST00000374022 PHLPP1O60346 1717 aa17.52■□□□□ 0.39
GJB1-202ENST00000374022 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
GJB1-202ENST00000374022 KRT28Q7Z3Y7 464 aa17.51■□□□□ 0.39
GJB1-202ENST00000374022 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
GJB1-202ENST00000374022 USP54Q70EL1 1684 aa17.51■□□□□ 0.39
GJB1-202ENST00000374022 TTC21AQ8NDW8 1320 aa17.51■□□□□ 0.39
GJB1-202ENST00000374022 MARF1Q9Y4F3 1742 aaKnown RBP17.51■□□□□ 0.39
GJB1-202ENST00000374022 NSD2O96028 1365 aa17.5■□□□□ 0.39
GJB1-202ENST00000374022 PAK3O75914 559 aaPredicted RBP17.49■□□□□ 0.39
GJB1-202ENST00000374022 CC2D1BQ5T0F9 858 aaKnown RBP17.49■□□□□ 0.39
GJB1-202ENST00000374022 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
GJB1-202ENST00000374022 SBNO1A3KN83 1393 aa17.48■□□□□ 0.39
GJB1-202ENST00000374022 FYB1O15117 783 aa17.48■□□□□ 0.39
GJB1-202ENST00000374022 CNGB1Q14028 1251 aaPredicted RBP17.48■□□□□ 0.39
GJB1-202ENST00000374022 NME9Q86XW9 330 aa17.48■□□□□ 0.39
GJB1-202ENST00000374022 COL16A1Q07092 1604 aaPredicted RBP17.47■□□□□ 0.39
GJB1-202ENST00000374022 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
GJB1-202ENST00000374022 GGNBP2Q9H3C7 697 aa17.46■□□□□ 0.39
GJB1-202ENST00000374022 OVOS2A0A0J9YW53 1432 aa17.45■□□□□ 0.38
GJB1-202ENST00000374022 ANP32CO43423 234 aa17.45■□□□□ 0.38
GJB1-202ENST00000374022 OVOS2Q6IE36 1432 aa17.45■□□□□ 0.38
GJB1-202ENST00000374022 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
GJB1-202ENST00000374022 PARD3Q8TEW0 1356 aa17.44■□□□□ 0.38
GJB1-202ENST00000374022 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
GJB1-202ENST00000374022 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
GJB1-202ENST00000374022 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
GJB1-202ENST00000374022 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
GJB1-202ENST00000374022 PRKRIP1Q9H875 184 aaPredicted RBP17.43■□□□□ 0.38
GJB1-202ENST00000374022 MAP2P11137 1827 aaKnown RBP17.43■□□□□ 0.38
GJB1-202ENST00000374022 PHRF1Q9P1Y6 1649 aaKnown RBP17.42■□□□□ 0.38
GJB1-202ENST00000374022 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
GJB1-202ENST00000374022 MORC1Q86VD1 984 aa17.42■□□□□ 0.38
GJB1-202ENST00000374022 COG3Q96JB2 828 aa17.42■□□□□ 0.38
GJB1-202ENST00000374022 ABCA3Q99758 1704 aa17.42■□□□□ 0.38
GJB1-202ENST00000374022 ARHGEF10O15013 1369 aa17.42■□□□□ 0.38
GJB1-202ENST00000374022 MED1Q15648 1581 aaPredicted RBP17.42■□□□□ 0.38
GJB1-202ENST00000374022 NLRP6P59044 892 aa17.41■□□□□ 0.38
GJB1-202ENST00000374022 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
GJB1-202ENST00000374022 RALBP1Q15311 655 aa17.41■□□□□ 0.38
GJB1-202ENST00000374022 SLIT3O75094 1523 aa17.39■□□□□ 0.37
GJB1-202ENST00000374022 COL22A1Q8NFW1 1626 aaPredicted RBP17.39■□□□□ 0.37
GJB1-202ENST00000374022 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
GJB1-202ENST00000374022 LRRC59Q96AG4 307 aaKnown RBP17.39■□□□□ 0.37
GJB1-202ENST00000374022 LTN1O94822 1766 aa17.38■□□□□ 0.37
GJB1-202ENST00000374022 SHPRHQ149N8 1683 aa17.38■□□□□ 0.37
GJB1-202ENST00000374022 USP19O94966 1318 aa17.37■□□□□ 0.37
GJB1-202ENST00000374022 TNNT2P45379 298 aaPredicted RBP17.37■□□□□ 0.37
GJB1-202ENST00000374022 NFAT5O94916 1531 aa17.36■□□□□ 0.37
GJB1-202ENST00000374022 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
GJB1-202ENST00000374022 MIER1Q8N108 512 aa17.35■□□□□ 0.37
GJB1-202ENST00000374022 PNPLA6Q8IY17 1366 aa17.34■□□□□ 0.37
GJB1-202ENST00000374022 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
GJB1-202ENST00000374022 PPP2R1AP30153 589 aa17.34■□□□□ 0.37
GJB1-202ENST00000374022 AATKQ6ZMQ8 1374 aa17.34■□□□□ 0.37
GJB1-202ENST00000374022 SOX12O15370 315 aa17.33■□□□□ 0.37
GJB1-202ENST00000374022 PEAK1Q9H792 1746 aa17.32■□□□□ 0.36
GJB1-202ENST00000374022 FBLN1P23142 703 aa17.32■□□□□ 0.36
GJB1-202ENST00000374022 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
GJB1-202ENST00000374022 HSPA1LP34931 641 aa17.31■□□□□ 0.36
GJB1-202ENST00000374022 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
GJB1-202ENST00000374022 GCP02774 474 aa17.31■□□□□ 0.36
GJB1-202ENST00000374022 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
GJB1-202ENST00000374022 JCADQ9P266 1359 aa17.3■□□□□ 0.36
GJB1-202ENST00000374022 CENPBP07199 599 aaPredicted RBP17.29■□□□□ 0.36
GJB1-202ENST00000374022 RRS1Q15050 365 aaKnown RBP17.29■□□□□ 0.36
GJB1-202ENST00000374022 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
GJB1-202ENST00000374022 RGPD5Q99666 1765 aa17.28■□□□□ 0.36
GJB1-202ENST00000374022 CDK12Q9NYV4 1490 aaPredicted RBP17.28■□□□□ 0.36
GJB1-202ENST00000374022 MTHFSP49914 203 aa17.27■□□□□ 0.36
GJB1-202ENST00000374022 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
GJB1-202ENST00000374022 FBXO41Q8TF61 875 aa17.27■□□□□ 0.36
GJB1-202ENST00000374022 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
GJB1-202ENST00000374022 MAP3K19Q56UN5 1328 aa17.27■□□□□ 0.36
GJB1-202ENST00000374022 COL18A1P39060 1754 aa17.27■□□□□ 0.35
GJB1-202ENST00000374022 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
GJB1-202ENST00000374022 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
GJB1-202ENST00000374022 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
GJB1-202ENST00000374022 ARHGEF25Q86VW2 580 aa17.25■□□□□ 0.35
GJB1-202ENST00000374022 RTL1A6NKG5 1358 aa17.25■□□□□ 0.35
GJB1-202ENST00000374022 CPDO75976 1380 aa17.25■□□□□ 0.35
GJB1-202ENST00000374022 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
GJB1-202ENST00000374022 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
GJB1-202ENST00000374022 FLT4P35916 1363 aa17.24■□□□□ 0.35
GJB1-202ENST00000374022 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
GJB1-202ENST00000374022 COL3A1P02461 1466 aaPredicted RBP17.24■□□□□ 0.35
GJB1-202ENST00000374022 ABCC6O95255 1503 aa17.24■□□□□ 0.35
GJB1-202ENST00000374022 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
GJB1-202ENST00000374022 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
GJB1-202ENST00000374022 AMPHP49418 695 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms