RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.56
HDAC8-205ENST00000373568 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
HDAC8-205ENST00000373568 BRD4O60885 1362 aaPredicted RBP18.52■□□□□ 0.55
HDAC8-205ENST00000373568 PIK3C2AO00443 1686 aa18.51■□□□□ 0.55
HDAC8-205ENST00000373568 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
HDAC8-205ENST00000373568 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
HDAC8-205ENST00000373568 TMF1P82094 1093 aa18.49■□□□□ 0.55
HDAC8-205ENST00000373568 NINLQ9Y2I6 1382 aa18.48■□□□□ 0.55
HDAC8-205ENST00000373568 ILDR2Q71H61 639 aa18.48■□□□□ 0.55
HDAC8-205ENST00000373568 USP54Q70EL1 1684 aa18.47■□□□□ 0.55
HDAC8-205ENST00000373568 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
HDAC8-205ENST00000373568 CABLES1Q8TDN4 633 aa18.47■□□□□ 0.55
HDAC8-205ENST00000373568 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
HDAC8-205ENST00000373568 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
HDAC8-205ENST00000373568 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
HDAC8-205ENST00000373568 ADAMTS2O95450 1211 aa18.46■□□□□ 0.55
HDAC8-205ENST00000373568 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
HDAC8-205ENST00000373568 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-205ENST00000373568 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
HDAC8-205ENST00000373568 PLCH1Q4KWH8 1693 aa18.45■□□□□ 0.54
HDAC8-205ENST00000373568 MEX3CQ5U5Q3 659 aaKnown RBP18.45■□□□□ 0.54
HDAC8-205ENST00000373568 TMC1Q8TDI8 760 aa18.44■□□□□ 0.54
HDAC8-205ENST00000373568 USP19O94966 1318 aa18.44■□□□□ 0.54
HDAC8-205ENST00000373568 TTC21BQ7Z4L5 1316 aa18.44■□□□□ 0.54
HDAC8-205ENST00000373568 SLIT3O75094 1523 aa18.44■□□□□ 0.54
HDAC8-205ENST00000373568 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
HDAC8-205ENST00000373568 C8orf37Q96NL8 207 aa18.43■□□□□ 0.54
HDAC8-205ENST00000373568 AFF2P51816 1311 aa18.43■□□□□ 0.54
HDAC8-205ENST00000373568 SLIT2O94813 1529 aa18.43■□□□□ 0.54
HDAC8-205ENST00000373568 CDCA8Q53HL2 280 aa18.42■□□□□ 0.54
HDAC8-205ENST00000373568 NWD2Q9ULI1 1742 aa18.42■□□□□ 0.54
HDAC8-205ENST00000373568 ANKRD36BQ8N2N9 1353 aa18.42■□□□□ 0.54
HDAC8-205ENST00000373568 EDC4Q6P2E9 1401 aaKnown RBP18.41■□□□□ 0.54
HDAC8-205ENST00000373568 NRAPQ86VF7 1730 aa18.41■□□□□ 0.54
HDAC8-205ENST00000373568 NUTM2GQ5VZR2 741 aa18.41■□□□□ 0.54
HDAC8-205ENST00000373568 POTEAQ6S8J7 498 aa18.41■□□□□ 0.54
HDAC8-205ENST00000373568 FNBP4Q8N3X1 1017 aaPredicted RBP18.41■□□□□ 0.54
HDAC8-205ENST00000373568 ABTB2Q8N961 1025 aa18.41■□□□□ 0.54
HDAC8-205ENST00000373568 TTC21AQ8NDW8 1320 aa18.41■□□□□ 0.54
HDAC8-205ENST00000373568 BCL9LQ86UU0 1499 aa18.4■□□□□ 0.54
HDAC8-205ENST00000373568 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
HDAC8-205ENST00000373568 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
HDAC8-205ENST00000373568 C11orf95C9JLR9 678 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-205ENST00000373568 PLEKHG5O94827 1062 aa18.39■□□□□ 0.53
HDAC8-205ENST00000373568 HDGFL2Q7Z4V5 671 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-205ENST00000373568 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-205ENST00000373568 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
HDAC8-205ENST00000373568 USP31Q70CQ4 1352 aa18.38■□□□□ 0.53
HDAC8-205ENST00000373568 NLRP13Q86W25 1043 aa18.37■□□□□ 0.53
HDAC8-205ENST00000373568 LMO7Q8WWI1 1683 aa18.37■□□□□ 0.53
HDAC8-205ENST00000373568 OVOS2A0A0J9YW53 1432 aa18.36■□□□□ 0.53
HDAC8-205ENST00000373568 ATRNO75882 1429 aa18.36■□□□□ 0.53
HDAC8-205ENST00000373568 NFAT5O94916 1531 aa18.36■□□□□ 0.53
HDAC8-205ENST00000373568 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
HDAC8-205ENST00000373568 OVOS2Q6IE36 1432 aa18.36■□□□□ 0.53
HDAC8-205ENST00000373568 CPDO75976 1380 aa18.35■□□□□ 0.53
HDAC8-205ENST00000373568 KIAA0232Q92628 1395 aa18.35■□□□□ 0.53
HDAC8-205ENST00000373568 FAM83GA6ND36 823 aa18.35■□□□□ 0.53
HDAC8-205ENST00000373568 NLRP6P59044 892 aa18.35■□□□□ 0.53
HDAC8-205ENST00000373568 KIF20BQ96Q89 1820 aa18.35■□□□□ 0.53
HDAC8-205ENST00000373568 NME9Q86XW9 330 aa18.34■□□□□ 0.53
HDAC8-205ENST00000373568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.53
HDAC8-205ENST00000373568 ZRANB1Q9UGI0 708 aa18.34■□□□□ 0.53
HDAC8-205ENST00000373568 USP21Q9UK80 565 aa18.34■□□□□ 0.53
HDAC8-205ENST00000373568 COL18A1P39060 1754 aa18.34■□□□□ 0.53
HDAC8-205ENST00000373568 GCP02774 474 aa18.33■□□□□ 0.52
HDAC8-205ENST00000373568 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
HDAC8-205ENST00000373568 GLI3P10071 1580 aa18.31■□□□□ 0.52
HDAC8-205ENST00000373568 CARD14Q9BXL6 1004 aa18.31■□□□□ 0.52
HDAC8-205ENST00000373568 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
HDAC8-205ENST00000373568 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
HDAC8-205ENST00000373568 PRDM11Q9NQV5 511 aa18.3■□□□□ 0.52
HDAC8-205ENST00000373568 CAMTA1Q9Y6Y1 1673 aa18.3■□□□□ 0.52
HDAC8-205ENST00000373568 CDK12Q9NYV4 1490 aaPredicted RBP18.29■□□□□ 0.52
HDAC8-205ENST00000373568 QTRT2Q9H974 415 aaKnown RBP18.29■□□□□ 0.52
HDAC8-205ENST00000373568 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
HDAC8-205ENST00000373568 LTN1O94822 1766 aa18.29■□□□□ 0.52
HDAC8-205ENST00000373568 CHRNA2Q15822 529 aa18.28■□□□□ 0.52
HDAC8-205ENST00000373568 TRPC5Q9UL62 973 aaPredicted RBP18.28■□□□□ 0.52
HDAC8-205ENST00000373568 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
HDAC8-205ENST00000373568 BTG4Q9NY30 223 aa18.27■□□□□ 0.52
HDAC8-205ENST00000373568 ABCC6O95255 1503 aa18.27■□□□□ 0.51
HDAC8-205ENST00000373568 RGPD5Q99666 1765 aa18.27■□□□□ 0.51
HDAC8-205ENST00000373568 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
HDAC8-205ENST00000373568 FYB1O15117 783 aa18.26■□□□□ 0.51
HDAC8-205ENST00000373568 RBM6P78332 1123 aaKnown RBP18.26■□□□□ 0.51
HDAC8-205ENST00000373568 KCNH5Q8NCM2 988 aa18.26■□□□□ 0.51
HDAC8-205ENST00000373568 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
HDAC8-205ENST00000373568 CCDC7Q96M83 1385 aa18.26■□□□□ 0.51
HDAC8-205ENST00000373568 RGS12O14924 1447 aa18.25■□□□□ 0.51
HDAC8-205ENST00000373568 RXRBP28702 533 aa18.25■□□□□ 0.51
HDAC8-205ENST00000373568 VPS72Q15906 364 aa18.25■□□□□ 0.51
HDAC8-205ENST00000373568 ARHGEF25Q86VW2 580 aa18.25■□□□□ 0.51
HDAC8-205ENST00000373568 WASHC2AQ641Q2 1341 aa18.24■□□□□ 0.51
HDAC8-205ENST00000373568 COL5A2P05997 1499 aaPredicted RBP18.24■□□□□ 0.51
HDAC8-205ENST00000373568 GJD4Q96KN9 370 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-205ENST00000373568 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
HDAC8-205ENST00000373568 PANK3Q9H999 370 aa18.22■□□□□ 0.51
HDAC8-205ENST00000373568 SOX12O15370 315 aa18.21■□□□□ 0.51
HDAC8-205ENST00000373568 COG3Q96JB2 828 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms