RNA–Protein interactions for RNA: ENST00000373557.6

LCK-204, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 3

Gene LCK, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-204ENST00000373557 USP54Q70EL1 1684 aa18.34■□□□□ 0.53
LCK-204ENST00000373557 ALS2Q96Q42 1657 aa18.34■□□□□ 0.53
LCK-204ENST00000373557 NPC1L1Q9UHC9 1359 aa18.34■□□□□ 0.53
LCK-204ENST00000373557 SOS2Q07890 1332 aaPredicted RBP18.34■□□□□ 0.53
LCK-204ENST00000373557 SBNO1A3KN83 1393 aa18.33■□□□□ 0.53
LCK-204ENST00000373557 TTC21BQ7Z4L5 1316 aa18.33■□□□□ 0.53
LCK-204ENST00000373557 ANKRD26Q9UPS8 1709 aa18.33■□□□□ 0.52
LCK-204ENST00000373557 PSME1Q06323 249 aa18.33■□□□□ 0.52
LCK-204ENST00000373557 PIK3C2AO00443 1686 aa18.33■□□□□ 0.52
LCK-204ENST00000373557 TTC21AQ8NDW8 1320 aa18.32■□□□□ 0.52
LCK-204ENST00000373557 AMER1Q5JTC6 1135 aaPredicted RBP18.32■□□□□ 0.52
LCK-204ENST00000373557 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
LCK-204ENST00000373557 KNSTRNQ9Y448 316 aa18.32■□□□□ 0.52
LCK-204ENST00000373557 MARF1Q9Y4F3 1742 aaKnown RBP18.31■□□□□ 0.52
LCK-204ENST00000373557 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
LCK-204ENST00000373557 NSD2O96028 1365 aa18.3■□□□□ 0.52
LCK-204ENST00000373557 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
LCK-204ENST00000373557 PHLPP1O60346 1717 aa18.3■□□□□ 0.52
LCK-204ENST00000373557 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
LCK-204ENST00000373557 USP31Q70CQ4 1352 aa18.29■□□□□ 0.52
LCK-204ENST00000373557 FYB1O15117 783 aa18.28■□□□□ 0.52
LCK-204ENST00000373557 PIP4K2BP78356 416 aa18.28■□□□□ 0.52
LCK-204ENST00000373557 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
LCK-204ENST00000373557 SPATA31A3Q5VYP0 1347 aa18.27■□□□□ 0.52
LCK-204ENST00000373557 OVOS2A0A0J9YW53 1432 aa18.27■□□□□ 0.52
LCK-204ENST00000373557 OVOS2Q6IE36 1432 aa18.27■□□□□ 0.52
LCK-204ENST00000373557 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.52
LCK-204ENST00000373557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.51
LCK-204ENST00000373557 CRYBG1Q9Y4K1 1723 aa18.26■□□□□ 0.51
LCK-204ENST00000373557 MED1Q15648 1581 aaPredicted RBP18.25■□□□□ 0.51
LCK-204ENST00000373557 NME9Q86XW9 330 aa18.25■□□□□ 0.51
LCK-204ENST00000373557 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
LCK-204ENST00000373557 ARHGEF10O15013 1369 aa18.24■□□□□ 0.51
LCK-204ENST00000373557 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
LCK-204ENST00000373557 PARD3Q8TEW0 1356 aa18.23■□□□□ 0.51
LCK-204ENST00000373557 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
LCK-204ENST00000373557 HSPA1LP34931 641 aa18.22■□□□□ 0.51
LCK-204ENST00000373557 ABTB2Q8N961 1025 aa18.22■□□□□ 0.51
LCK-204ENST00000373557 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
LCK-204ENST00000373557 SLIT3O75094 1523 aa18.22■□□□□ 0.51
LCK-204ENST00000373557 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
LCK-204ENST00000373557 LRRC59Q96AG4 307 aaKnown RBP18.21■□□□□ 0.51
LCK-204ENST00000373557 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
LCK-204ENST00000373557 USP19O94966 1318 aa18.21■□□□□ 0.51
LCK-204ENST00000373557 ABCA3Q99758 1704 aa18.2■□□□□ 0.5
LCK-204ENST00000373557 PHRF1Q9P1Y6 1649 aaKnown RBP18.2■□□□□ 0.5
LCK-204ENST00000373557 SHPRHQ149N8 1683 aa18.2■□□□□ 0.5
LCK-204ENST00000373557 CC2D1BQ5T0F9 858 aaKnown RBP18.2■□□□□ 0.5
LCK-204ENST00000373557 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
LCK-204ENST00000373557 NLRP6P59044 892 aa18.18■□□□□ 0.5
LCK-204ENST00000373557 RALBP1Q15311 655 aa18.18■□□□□ 0.5
LCK-204ENST00000373557 NLRP13Q86W25 1043 aa18.18■□□□□ 0.5
LCK-204ENST00000373557 COG3Q96JB2 828 aa18.18■□□□□ 0.5
LCK-204ENST00000373557 NFAT5O94916 1531 aa18.18■□□□□ 0.5
LCK-204ENST00000373557 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
LCK-204ENST00000373557 AATKQ6ZMQ8 1374 aa18.17■□□□□ 0.5
LCK-204ENST00000373557 MORC1Q86VD1 984 aa18.16■□□□□ 0.5
LCK-204ENST00000373557 NUTM2GQ5VZR2 741 aa18.15■□□□□ 0.5
LCK-204ENST00000373557 ANP32CO43423 234 aa18.14■□□□□ 0.49
LCK-204ENST00000373557 LMOD2Q6P5Q4 547 aa18.14■□□□□ 0.49
LCK-204ENST00000373557 MAP2P11137 1827 aaKnown RBP18.14■□□□□ 0.49
LCK-204ENST00000373557 JCADQ9P266 1359 aa18.13■□□□□ 0.49
LCK-204ENST00000373557 SMG6Q86US8 1419 aaKnown RBP18.13■□□□□ 0.49
LCK-204ENST00000373557 KCNH5Q8NCM2 988 aa18.12■□□□□ 0.49
LCK-204ENST00000373557 GCP02774 474 aa18.11■□□□□ 0.49
LCK-204ENST00000373557 LTN1O94822 1766 aa18.11■□□□□ 0.49
LCK-204ENST00000373557 MYBBP1AQ9BQG0 1328 aaKnown RBP18.1■□□□□ 0.49
LCK-204ENST00000373557 PPP2R1AP30153 589 aa18.1■□□□□ 0.49
LCK-204ENST00000373557 CPDO75976 1380 aa18.09■□□□□ 0.49
LCK-204ENST00000373557 CNGB1Q14028 1251 aaPredicted RBP18.09■□□□□ 0.49
LCK-204ENST00000373557 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
LCK-204ENST00000373557 ABCC6O95255 1503 aa18.08■□□□□ 0.49
LCK-204ENST00000373557 KIF24Q5T7B8 1368 aa18.08■□□□□ 0.49
LCK-204ENST00000373557 CABLES1Q8TDN4 633 aa18.08■□□□□ 0.48
LCK-204ENST00000373557 POLKQ9UBT6 870 aa18.08■□□□□ 0.48
LCK-204ENST00000373557 COL18A1P39060 1754 aa18.08■□□□□ 0.48
LCK-204ENST00000373557 FBLN1P23142 703 aa18.07■□□□□ 0.48
LCK-204ENST00000373557 TNNT2P45379 298 aaPredicted RBP18.07■□□□□ 0.48
LCK-204ENST00000373557 INSRP06213 1382 aa18.06■□□□□ 0.48
LCK-204ENST00000373557 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
LCK-204ENST00000373557 ARHGEF25Q86VW2 580 aa18.06■□□□□ 0.48
LCK-204ENST00000373557 CDK12Q9NYV4 1490 aaPredicted RBP18.06■□□□□ 0.48
LCK-204ENST00000373557 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
LCK-204ENST00000373557 SPATA31A6Q5VVP1 1343 aa18.05■□□□□ 0.48
LCK-204ENST00000373557 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
LCK-204ENST00000373557 RRS1Q15050 365 aaKnown RBP18.04■□□□□ 0.48
LCK-204ENST00000373557 MIER1Q8N108 512 aa18.04■□□□□ 0.48
LCK-204ENST00000373557 COL3A1P02461 1466 aaPredicted RBP18.03■□□□□ 0.48
LCK-204ENST00000373557 SOX12O15370 315 aa18.03■□□□□ 0.48
LCK-204ENST00000373557 MTHFSP49914 203 aa18.03■□□□□ 0.48
LCK-204ENST00000373557 EMILIN1Q9Y6C2 1016 aa18.03■□□□□ 0.48
LCK-204ENST00000373557 FLT4P35916 1363 aa18.03■□□□□ 0.48
LCK-204ENST00000373557 KIAA0232Q92628 1395 aa18.03■□□□□ 0.48
LCK-204ENST00000373557 COL14A1Q05707 1796 aaKnown RBP18.02■□□□□ 0.48
LCK-204ENST00000373557 LRP6O75581 1613 aa18.01■□□□□ 0.47
LCK-204ENST00000373557 CCER2I3L3R5 266 aa18.01■□□□□ 0.47
LCK-204ENST00000373557 RGPD5Q99666 1765 aa18■□□□□ 0.47
LCK-204ENST00000373557 PLEKHG5O94827 1062 aa18■□□□□ 0.47
LCK-204ENST00000373557 ZC3H6P61129 1189 aaKnown RBP18■□□□□ 0.47
LCK-204ENST00000373557 IP6K1Q92551 441 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms