RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 MYBBP1AQ9BQG0 1328 aaKnown RBP8.33□□□□□ -1.08
CSMD2-206ENST00000373388 VGFO15240 615 aaPredicted RBP8.32□□□□□ -1.08
CSMD2-206ENST00000373388 STAMBPO95630 424 aa8.32□□□□□ -1.08
CSMD2-206ENST00000373388 JMYQ8N9B5 988 aa8.32□□□□□ -1.08
CSMD2-206ENST00000373388 CCDC181Q5TID7 509 aa8.32□□□□□ -1.08
CSMD2-206ENST00000373388 DACH1Q9UI36 760 aa8.32□□□□□ -1.08
CSMD2-206ENST00000373388 ZFYP08048 801 aaPredicted RBP8.32□□□□□ -1.08
CSMD2-206ENST00000373388 SYNE3Q6ZMZ3 975 aa8.32□□□□□ -1.08
CSMD2-206ENST00000373388 MORC1Q86VD1 984 aa8.32□□□□□ -1.08
CSMD2-206ENST00000373388 SDF4Q9BRK5 362 aa8.32□□□□□ -1.08
CSMD2-206ENST00000373388 A6NNZ2 444 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 EPS15P42566 896 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 TUBB8Q3ZCM7 444 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 CPLX1O14810 134 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 CCDC148Q8NFR7 591 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 PTPN14Q15678 1187 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 DZIP1Q86YF9 867 aaKnown RBP8.31□□□□□ -1.08
CSMD2-206ENST00000373388 SFPQP23246 707 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSMD2-206ENST00000373388 RNF214Q8ND24 703 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 RBBP5Q15291 538 aaKnown RBP8.31□□□□□ -1.08
CSMD2-206ENST00000373388 PPFIBP1Q86W92 1011 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 LRCH2Q5VUJ6 765 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 CEP57L1Q8IYX8 460 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 ARHGAP35Q9NRY4 1499 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 IMMTQ16891 758 aaKnown RBP8.31□□□□□ -1.08
CSMD2-206ENST00000373388 GORABQ5T7V8 394 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 ZKSCAN2Q63HK3 967 aa8.31□□□□□ -1.08
CSMD2-206ENST00000373388 MAP2K1Q02750 393 aaPredicted RBP8.31□□□□□ -1.08
CSMD2-206ENST00000373388 GABPB1Q06547 395 aaPredicted RBP8.31□□□□□ -1.08
CSMD2-206ENST00000373388 BAZ1AQ9NRL2 1556 aaPredicted RBP8.31□□□□□ -1.08
CSMD2-206ENST00000373388 RBM25P49756 843 aaKnown RBP8.3□□□□□ -1.08
CSMD2-206ENST00000373388 SAFBQ15424 915 aaKnown RBP eCLIP8.3□□□□□ -1.08
CSMD2-206ENST00000373388 TERF1P54274 439 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 PDILTQ8N807 584 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 RTF1Q92541 710 aaKnown RBP8.3□□□□□ -1.08
CSMD2-206ENST00000373388 MSL1Q68DK7 614 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 EIF4G1Q04637 1599 aaKnown RBP8.3□□□□□ -1.08
CSMD2-206ENST00000373388 SMARCC1Q92922 1105 aaPredicted RBP8.3□□□□□ -1.08
CSMD2-206ENST00000373388 TUBBP07437 444 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 BANK1Q8NDB2 785 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 ZMAT2Q96NC0 199 aaKnown RBP8.3□□□□□ -1.08
CSMD2-206ENST00000373388 CCDC171Q6TFL3 1326 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 GCOM1H8Y6P7 765 aaPredicted RBP8.3□□□□□ -1.08
CSMD2-206ENST00000373388 MYZAPP0CAP1 466 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 CFAP45Q9UL16 551 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 POTEDQ86YR6 584 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 SRRTQ9BXP5 876 aaKnown RBP8.3□□□□□ -1.08
CSMD2-206ENST00000373388 VPS37CA5D8V6 355 aaPredicted RBP8.3□□□□□ -1.08
CSMD2-206ENST00000373388 USH1CQ9Y6N9 552 aa8.3□□□□□ -1.08
CSMD2-206ENST00000373388 ARHGAP29Q52LW3 1261 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 NUTM1Q86Y26 1132 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 NUP133Q8WUM0 1156 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 ZNF396Q96N95 335 aaPredicted RBP8.29□□□□□ -1.08
CSMD2-206ENST00000373388 SRPK2P78362 688 aaKnown RBP8.29□□□□□ -1.08
CSMD2-206ENST00000373388 WDR33Q9C0J8 1336 aaKnown RBP8.29□□□□□ -1.08
CSMD2-206ENST00000373388 AP1ARQ63HQ0 302 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 CCDC83Q8IWF9 413 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 BAZ1BQ9UIG0 1483 aaKnown RBP8.29□□□□□ -1.08
CSMD2-206ENST00000373388 CDC45O75419 566 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
CSMD2-206ENST00000373388 GSDMDP57764 484 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 CEP112Q8N8E3 955 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 LMAN1P49257 510 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 PLEKHH1Q9ULM0 1364 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 CCDC38Q502W7 563 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 STK26Q9P289 416 aa8.29□□□□□ -1.08
CSMD2-206ENST00000373388 VPS8Q8N3P4 1428 aa8.28□□□□□ -1.08
CSMD2-206ENST00000373388 KIF5BP33176 963 aa8.28□□□□□ -1.08
CSMD2-206ENST00000373388 MAP2K2P36507 400 aa8.28□□□□□ -1.08
CSMD2-206ENST00000373388 NSRP1Q9H0G5 558 aaKnown RBP8.28□□□□□ -1.08
CSMD2-206ENST00000373388 MCM4P33991 863 aa8.28□□□□□ -1.08
CSMD2-206ENST00000373388 FOXD4L6Q3SYB3 417 aaPredicted RBP8.28□□□□□ -1.08
CSMD2-206ENST00000373388 FOXD4L3Q6VB84 417 aaPredicted RBP8.28□□□□□ -1.08
CSMD2-206ENST00000373388 PAF1Q8N7H5 531 aa8.28□□□□□ -1.08
CSMD2-206ENST00000373388 EBAG9O00559 213 aa8.28□□□□□ -1.08
CSMD2-206ENST00000373388 PSMA5P28066 241 aa8.28□□□□□ -1.08
CSMD2-206ENST00000373388 ANKRD18BA2A2Z9 1011 aa8.28□□□□□ -1.08
CSMD2-206ENST00000373388 DHX16O60231 1041 aaKnown RBP8.27□□□□□ -1.09
CSMD2-206ENST00000373388 TNMDQ9H2S6 317 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 CLUAP1Q96AJ1 413 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 BACH2Q9BYV9 841 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 SKIDA1Q1XH10 827 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 MAGEC2Q9UBF1 373 aaPredicted RBP8.27□□□□□ -1.09
CSMD2-206ENST00000373388 EHBP1Q8NDI1 1231 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 BRMS1Q9HCU9 246 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 ARFGAP3Q9NP61 516 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 OGFRQ9NZT2 677 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 TAX1BP1Q86VP1 789 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 STIM1Q13586 685 aa8.27□□□□□ -1.09
CSMD2-206ENST00000373388 RNF187Q5TA31 235 aaPredicted RBP8.27□□□□□ -1.09
CSMD2-206ENST00000373388 KIF5CO60282 957 aa8.26□□□□□ -1.09
CSMD2-206ENST00000373388 MARCH6O60337 910 aa8.26□□□□□ -1.09
CSMD2-206ENST00000373388 ARID4AP29374 1257 aaPredicted RBP8.26□□□□□ -1.09
CSMD2-206ENST00000373388 WHAMMP3Q1A5X7 153 aa8.26□□□□□ -1.09
CSMD2-206ENST00000373388 SEPT11Q9NVA2 429 aaKnown RBP8.26□□□□□ -1.09
CSMD2-206ENST00000373388 ERC1Q8IUD2 1116 aa8.26□□□□□ -1.09
CSMD2-206ENST00000373388 B4GALNT4Q76KP1 1039 aa8.26□□□□□ -1.09
CSMD2-206ENST00000373388 DDX12PQ92771 950 aa8.26□□□□□ -1.09
CSMD2-206ENST00000373388 KIF27Q86VH2 1401 aa8.26□□□□□ -1.09
CSMD2-206ENST00000373388 U2AF1L5P0DN76 240 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms