RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 CRBNQ96SW2 442 aa17.51■□□□□ 0.39
CSTF2-201ENST00000372972 ADGRB2O60241 1585 aa17.5■□□□□ 0.39
CSTF2-201ENST00000372972 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
CSTF2-201ENST00000372972 PTCH1Q13635 1447 aa17.5■□□□□ 0.39
CSTF2-201ENST00000372972 PPIP5K1Q6PFW1 1433 aa17.5■□□□□ 0.39
CSTF2-201ENST00000372972 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
CSTF2-201ENST00000372972 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
CSTF2-201ENST00000372972 IQSEC2Q5JU85 1478 aa17.49■□□□□ 0.39
CSTF2-201ENST00000372972 ANKRD26Q9UPS8 1709 aa17.49■□□□□ 0.39
CSTF2-201ENST00000372972 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
CSTF2-201ENST00000372972 WDR63Q8IWG1 891 aa17.49■□□□□ 0.39
CSTF2-201ENST00000372972 XRN1Q8IZH2 1706 aaKnown RBP17.49■□□□□ 0.39
CSTF2-201ENST00000372972 NCKAP5LQ9HCH0 1330 aa17.48■□□□□ 0.39
CSTF2-201ENST00000372972 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
CSTF2-201ENST00000372972 RRP7AQ9Y3A4 280 aaKnown RBP17.48■□□□□ 0.39
CSTF2-201ENST00000372972 CCDC61Q9Y6R9 512 aa17.48■□□□□ 0.39
CSTF2-201ENST00000372972 PRR36Q9H6K5 1346 aa17.47■□□□□ 0.39
CSTF2-201ENST00000372972 PIK3R4Q99570 1358 aa17.47■□□□□ 0.39
CSTF2-201ENST00000372972 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
CSTF2-201ENST00000372972 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.39
CSTF2-201ENST00000372972 KCNA6P17658 529 aa17.46■□□□□ 0.39
CSTF2-201ENST00000372972 U2SURPO15042 1029 aaKnown RBP17.45■□□□□ 0.38
CSTF2-201ENST00000372972 COL3A1P02461 1466 aaPredicted RBP17.45■□□□□ 0.38
CSTF2-201ENST00000372972 PNPLA6Q8IY17 1366 aa17.44■□□□□ 0.38
CSTF2-201ENST00000372972 KIF20BQ96Q89 1820 aa17.44■□□□□ 0.38
CSTF2-201ENST00000372972 CDC42BPGQ6DT37 1551 aa17.44■□□□□ 0.38
CSTF2-201ENST00000372972 EDC4Q6P2E9 1401 aaKnown RBP17.43■□□□□ 0.38
CSTF2-201ENST00000372972 DIAPH1O60610 1272 aaKnown RBP17.43■□□□□ 0.38
CSTF2-201ENST00000372972 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
CSTF2-201ENST00000372972 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
CSTF2-201ENST00000372972 CHD2O14647 1828 aaKnown RBP17.42■□□□□ 0.38
CSTF2-201ENST00000372972 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
CSTF2-201ENST00000372972 NUTM2FA1L443 756 aa17.42■□□□□ 0.38
CSTF2-201ENST00000372972 BCAR3O75815 825 aa17.42■□□□□ 0.38
CSTF2-201ENST00000372972 PNNQ9H307 717 aaKnown RBP17.42■□□□□ 0.38
CSTF2-201ENST00000372972 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
CSTF2-201ENST00000372972 TOPAZ1Q8N9V7 1692 aa17.41■□□□□ 0.38
CSTF2-201ENST00000372972 AKAP12Q02952 1782 aa17.4■□□□□ 0.38
CSTF2-201ENST00000372972 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
CSTF2-201ENST00000372972 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
CSTF2-201ENST00000372972 POLKQ9UBT6 870 aa17.4■□□□□ 0.38
CSTF2-201ENST00000372972 MON2Q7Z3U7 1717 aa17.4■□□□□ 0.38
CSTF2-201ENST00000372972 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
CSTF2-201ENST00000372972 TMPOP42166 694 aaKnown RBP17.39■□□□□ 0.37
CSTF2-201ENST00000372972 PLEKHG3A1L390 1219 aa17.38■□□□□ 0.37
CSTF2-201ENST00000372972 TCERG1O14776 1098 aaKnown RBP17.38■□□□□ 0.37
CSTF2-201ENST00000372972 NME9Q86XW9 330 aa17.38■□□□□ 0.37
CSTF2-201ENST00000372972 PPM1GO15355 546 aaPredicted RBP17.37■□□□□ 0.37
CSTF2-201ENST00000372972 FCHSD2O94868 740 aa17.37■□□□□ 0.37
CSTF2-201ENST00000372972 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
CSTF2-201ENST00000372972 ACEP12821 1306 aa17.36■□□□□ 0.37
CSTF2-201ENST00000372972 FBLN1P23142 703 aa17.36■□□□□ 0.37
CSTF2-201ENST00000372972 COG3Q96JB2 828 aa17.36■□□□□ 0.37
CSTF2-201ENST00000372972 AATKQ6ZMQ8 1374 aa17.35■□□□□ 0.37
CSTF2-201ENST00000372972 RARSP54136 660 aaKnown RBP17.35■□□□□ 0.37
CSTF2-201ENST00000372972 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
CSTF2-201ENST00000372972 RGPD8O14715 1765 aaPredicted RBP17.34■□□□□ 0.37
CSTF2-201ENST00000372972 TRIM35Q9UPQ4 493 aa17.34■□□□□ 0.37
CSTF2-201ENST00000372972 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.37
CSTF2-201ENST00000372972 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.36
CSTF2-201ENST00000372972 RBM33Q96EV2 1170 aaKnown RBP17.33■□□□□ 0.36
CSTF2-201ENST00000372972 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.36
CSTF2-201ENST00000372972 NALCNQ8IZF0 1738 aa17.32■□□□□ 0.36
CSTF2-201ENST00000372972 FMN2Q9NZ56 1722 aa17.32■□□□□ 0.36
CSTF2-201ENST00000372972 MS4A1P11836 297 aa17.32■□□□□ 0.36
CSTF2-201ENST00000372972 RIPK4P57078 832 aa17.32■□□□□ 0.36
CSTF2-201ENST00000372972 PMFBP1Q8TBY8 1022 aa17.32■□□□□ 0.36
CSTF2-201ENST00000372972 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
CSTF2-201ENST00000372972 IL16Q14005 1332 aa17.32■□□□□ 0.36
CSTF2-201ENST00000372972 NRKQ7Z2Y5 1582 aa17.32■□□□□ 0.36
CSTF2-201ENST00000372972 CT47B1P0C2W7 299 aaPredicted RBP17.31■□□□□ 0.36
CSTF2-201ENST00000372972 RSPH6AQ9H0K4 717 aa17.31■□□□□ 0.36
CSTF2-201ENST00000372972 TTC21BQ7Z4L5 1316 aa17.31■□□□□ 0.36
CSTF2-201ENST00000372972 USP6P35125 1406 aa17.31■□□□□ 0.36
CSTF2-201ENST00000372972 ANKARQ7Z5J8 1434 aa17.31■□□□□ 0.36
CSTF2-201ENST00000372972 KDM4FA0A1W2PPD8 638 aa17.31■□□□□ 0.36
CSTF2-201ENST00000372972 NEFMP07197 916 aa17.31■□□□□ 0.36
CSTF2-201ENST00000372972 MAP2P11137 1827 aaKnown RBP17.31■□□□□ 0.36
CSTF2-201ENST00000372972 IL13P35225 146 aa17.29■□□□□ 0.36
CSTF2-201ENST00000372972 FRAT1Q92837 279 aaPredicted RBP17.29■□□□□ 0.36
CSTF2-201ENST00000372972 CDK12Q9NYV4 1490 aaPredicted RBP17.29■□□□□ 0.36
CSTF2-201ENST00000372972 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
CSTF2-201ENST00000372972 NWD1Q149M9 1564 aa17.28■□□□□ 0.36
CSTF2-201ENST00000372972 NGDNQ8NEJ9 315 aaKnown RBP17.28■□□□□ 0.36
CSTF2-201ENST00000372972 SSH2Q76I76 1423 aa17.28■□□□□ 0.36
CSTF2-201ENST00000372972 ADGRL3Q9HAR2 1447 aa17.28■□□□□ 0.36
CSTF2-201ENST00000372972 MSH5O43196 834 aa17.27■□□□□ 0.36
CSTF2-201ENST00000372972 PANK1Q8TE04 598 aa17.27■□□□□ 0.36
CSTF2-201ENST00000372972 TSR2Q969E8 191 aaKnown RBP17.27■□□□□ 0.36
CSTF2-201ENST00000372972 LRRC7Q96NW7 1537 aa17.27■□□□□ 0.35
CSTF2-201ENST00000372972 HSPA2P54652 639 aa17.26■□□□□ 0.35
CSTF2-201ENST00000372972 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
CSTF2-201ENST00000372972 AAMPQ13685 434 aa17.26■□□□□ 0.35
CSTF2-201ENST00000372972 COG6Q9Y2V7 657 aa17.26■□□□□ 0.35
CSTF2-201ENST00000372972 HMOX1P09601 288 aa17.25■□□□□ 0.35
CSTF2-201ENST00000372972 EXOSC9Q06265 439 aaKnown RBP17.25■□□□□ 0.35
CSTF2-201ENST00000372972 NFE2L2Q16236 605 aa17.25■□□□□ 0.35
CSTF2-201ENST00000372972 PDE4AP27815 886 aa17.24■□□□□ 0.35
CSTF2-201ENST00000372972 BCL2L13Q9BXK5 485 aa17.24■□□□□ 0.35
CSTF2-201ENST00000372972 TTC21AQ8NDW8 1320 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms