RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 NUP155O75694 1391 aa17.71■□□□□ 0.43
CHCHD1-202ENST00000372837 NUP188Q5SRE5 1749 aa17.71■□□□□ 0.43
CHCHD1-202ENST00000372837 SPATA31A5Q5VU36 1347 aa17.71■□□□□ 0.42
CHCHD1-202ENST00000372837 SPATA31A7Q8IWB4 1347 aa17.71■□□□□ 0.42
CHCHD1-202ENST00000372837 FAM196AQ6ZSG2 479 aa17.7■□□□□ 0.42
CHCHD1-202ENST00000372837 THSD7AQ9UPZ6 1657 aa17.7■□□□□ 0.42
CHCHD1-202ENST00000372837 FKBP8Q14318 412 aa17.69■□□□□ 0.42
CHCHD1-202ENST00000372837 SIN3AQ96ST3 1273 aa17.69■□□□□ 0.42
CHCHD1-202ENST00000372837 ABCA3Q99758 1704 aa17.68■□□□□ 0.42
CHCHD1-202ENST00000372837 RBM19Q9Y4C8 960 aaKnown RBP17.68■□□□□ 0.42
CHCHD1-202ENST00000372837 ROCK1Q13464 1354 aa17.67■□□□□ 0.42
CHCHD1-202ENST00000372837 LMOD2Q6P5Q4 547 aa17.66■□□□□ 0.42
CHCHD1-202ENST00000372837 WAPLQ7Z5K2 1190 aa17.66■□□□□ 0.42
CHCHD1-202ENST00000372837 KIF1AQ12756 1690 aa17.66■□□□□ 0.42
CHCHD1-202ENST00000372837 VGFO15240 615 aaPredicted RBP17.65■□□□□ 0.42
CHCHD1-202ENST00000372837 PSME1Q06323 249 aa17.65■□□□□ 0.42
CHCHD1-202ENST00000372837 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
CHCHD1-202ENST00000372837 CLTCL1P53675 1640 aa17.64■□□□□ 0.41
CHCHD1-202ENST00000372837 SBNO1A3KN83 1393 aa17.64■□□□□ 0.41
CHCHD1-202ENST00000372837 NRKQ7Z2Y5 1582 aa17.63■□□□□ 0.41
CHCHD1-202ENST00000372837 ARHGEF10O15013 1369 aa17.63■□□□□ 0.41
CHCHD1-202ENST00000372837 PHF8Q9UPP1 1060 aa17.61■□□□□ 0.41
CHCHD1-202ENST00000372837 PLEKHH1Q9ULM0 1364 aa17.61■□□□□ 0.41
CHCHD1-202ENST00000372837 FMN2Q9NZ56 1722 aa17.61■□□□□ 0.41
CHCHD1-202ENST00000372837 GIGYF1O75420 1035 aaPredicted RBP17.6■□□□□ 0.41
CHCHD1-202ENST00000372837 CHD4Q14839 1912 aa17.59■□□□□ 0.41
CHCHD1-202ENST00000372837 COL14A1Q05707 1796 aaKnown RBP17.59■□□□□ 0.41
CHCHD1-202ENST00000372837 PTGER2P43116 358 aa17.59■□□□□ 0.41
CHCHD1-202ENST00000372837 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
CHCHD1-202ENST00000372837 PDGFDQ9GZP0 370 aaPredicted RBP17.59■□□□□ 0.41
CHCHD1-202ENST00000372837 SPATA31A1Q5TZJ5 1347 aa17.58■□□□□ 0.4
CHCHD1-202ENST00000372837 SYT17Q9BSW7 474 aa17.58■□□□□ 0.4
CHCHD1-202ENST00000372837 STK26Q9P289 416 aa17.58■□□□□ 0.4
CHCHD1-202ENST00000372837 TECPR2O15040 1411 aa17.57■□□□□ 0.4
CHCHD1-202ENST00000372837 MYOM1P52179 1685 aa17.57■□□□□ 0.4
CHCHD1-202ENST00000372837 ZBTB7AO95365 584 aa17.56■□□□□ 0.4
CHCHD1-202ENST00000372837 FHDC1Q9C0D6 1143 aaPredicted RBP17.56■□□□□ 0.4
CHCHD1-202ENST00000372837 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
CHCHD1-202ENST00000372837 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
CHCHD1-202ENST00000372837 CASZ1Q86V15 1759 aa17.56■□□□□ 0.4
CHCHD1-202ENST00000372837 KIF1BO60333 1816 aa17.54■□□□□ 0.4
CHCHD1-202ENST00000372837 RPGRIP1LQ68CZ1 1315 aa17.53■□□□□ 0.4
CHCHD1-202ENST00000372837 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
CHCHD1-202ENST00000372837 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
CHCHD1-202ENST00000372837 RGPD8O14715 1765 aaPredicted RBP17.52■□□□□ 0.4
CHCHD1-202ENST00000372837 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
CHCHD1-202ENST00000372837 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
CHCHD1-202ENST00000372837 PMFBP1Q8TBY8 1022 aa17.49■□□□□ 0.39
CHCHD1-202ENST00000372837 STRN4Q9NRL3 753 aa17.49■□□□□ 0.39
CHCHD1-202ENST00000372837 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
CHCHD1-202ENST00000372837 BARGINQ6ZT62 677 aa17.48■□□□□ 0.39
CHCHD1-202ENST00000372837 PPP4R2Q9NY27 417 aa17.48■□□□□ 0.39
CHCHD1-202ENST00000372837 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
CHCHD1-202ENST00000372837 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
CHCHD1-202ENST00000372837 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
CHCHD1-202ENST00000372837 PPLO60437 1756 aa17.46■□□□□ 0.39
CHCHD1-202ENST00000372837 SGIP1Q9BQI5 828 aa17.46■□□□□ 0.39
CHCHD1-202ENST00000372837 TRPM3Q9HCF6 1732 aaPredicted RBP17.46■□□□□ 0.39
CHCHD1-202ENST00000372837 PLSCR1O15162 318 aa17.45■□□□□ 0.38
CHCHD1-202ENST00000372837 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
CHCHD1-202ENST00000372837 DLC1Q96QB1 1528 aa17.45■□□□□ 0.38
CHCHD1-202ENST00000372837 ALS2Q96Q42 1657 aa17.45■□□□□ 0.38
CHCHD1-202ENST00000372837 KNDC1Q76NI1 1749 aa17.44■□□□□ 0.38
CHCHD1-202ENST00000372837 IFT172Q9UG01 1749 aa17.44■□□□□ 0.38
CHCHD1-202ENST00000372837 KIAA0232Q92628 1395 aa17.43■□□□□ 0.38
CHCHD1-202ENST00000372837 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHCHD1-202ENST00000372837 PROM2Q8N271 834 aa17.43■□□□□ 0.38
CHCHD1-202ENST00000372837 BCL11BQ9C0K0 894 aaPredicted RBP17.43■□□□□ 0.38
CHCHD1-202ENST00000372837 CRYBG1Q9Y4K1 1723 aa17.43■□□□□ 0.38
CHCHD1-202ENST00000372837 ANKRD30BQ9BXX2 1392 aa17.42■□□□□ 0.38
CHCHD1-202ENST00000372837 SHANK3Q9BYB0 1731 aa17.42■□□□□ 0.38
CHCHD1-202ENST00000372837 GPR162Q16538 588 aa17.41■□□□□ 0.38
CHCHD1-202ENST00000372837 SIRT1Q96EB6 747 aa17.41■□□□□ 0.38
CHCHD1-202ENST00000372837 RGPD3A6NKT7 1758 aaPredicted RBP17.4■□□□□ 0.38
CHCHD1-202ENST00000372837 RGPD4Q7Z3J3 1758 aa17.4■□□□□ 0.38
CHCHD1-202ENST00000372837 YTHDC2Q9H6S0 1430 aaKnown RBP17.4■□□□□ 0.38
CHCHD1-202ENST00000372837 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
CHCHD1-202ENST00000372837 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
CHCHD1-202ENST00000372837 MTFR1LQ9H019 292 aa17.4■□□□□ 0.38
CHCHD1-202ENST00000372837 SSH2Q76I76 1423 aa17.39■□□□□ 0.38
CHCHD1-202ENST00000372837 GPRASP1Q5JY77 1395 aa17.39■□□□□ 0.37
CHCHD1-202ENST00000372837 MAP3K5Q99683 1374 aa17.39■□□□□ 0.37
CHCHD1-202ENST00000372837 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
CHCHD1-202ENST00000372837 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
CHCHD1-202ENST00000372837 ARXQ96QS3 562 aa17.38■□□□□ 0.37
CHCHD1-202ENST00000372837 HSPA6P17066 643 aa17.37■□□□□ 0.37
CHCHD1-202ENST00000372837 ANKARQ7Z5J8 1434 aa17.37■□□□□ 0.37
CHCHD1-202ENST00000372837 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
CHCHD1-202ENST00000372837 EVA1CP58658 441 aa17.36■□□□□ 0.37
CHCHD1-202ENST00000372837 ZC3H6P61129 1189 aaKnown RBP17.36■□□□□ 0.37
CHCHD1-202ENST00000372837 SLC15A2Q16348 729 aa17.36■□□□□ 0.37
CHCHD1-202ENST00000372837 STK32BQ9NY57 414 aa17.36■□□□□ 0.37
CHCHD1-202ENST00000372837 GOLGB1Q14789 3259 aaKnown RBP17.35■□□□□ 0.37
CHCHD1-202ENST00000372837 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
CHCHD1-202ENST00000372837 SAFB2Q14151 953 aaKnown RBP eCLIP17.35■□□□□ 0.37
CHCHD1-202ENST00000372837 ZBED9Q6R2W3 1325 aa17.35■□□□□ 0.37
CHCHD1-202ENST00000372837 OVOS2A0A0G2JMS6 1433 aa17.35■□□□□ 0.37
CHCHD1-202ENST00000372837 OVOS2A0A0J9YW53 1432 aa17.35■□□□□ 0.37
CHCHD1-202ENST00000372837 OVOS2Q6IE36 1432 aa17.35■□□□□ 0.37
CHCHD1-202ENST00000372837 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms