RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 TTC21BQ7Z4L5 1316 aa24.03■■□□□ 1.44
CD40-202ENST00000372285 STRCP1A6NGW2 1772 aa24.02■■□□□ 1.44
CD40-202ENST00000372285 COL3A1P02461 1466 aaPredicted RBP24.01■■□□□ 1.43
CD40-202ENST00000372285 SMG6Q86US8 1419 aaKnown RBP24.01■■□□□ 1.43
CD40-202ENST00000372285 PMFBP1Q8TBY8 1022 aa23.99■■□□□ 1.43
CD40-202ENST00000372285 AATKQ6ZMQ8 1374 aa23.99■■□□□ 1.43
CD40-202ENST00000372285 PROSER2Q86WR7 435 aaPredicted RBP23.98■■□□□ 1.43
CD40-202ENST00000372285 NGDNQ8NEJ9 315 aaKnown RBP23.98■■□□□ 1.43
CD40-202ENST00000372285 RBM33Q96EV2 1170 aaKnown RBP23.98■■□□□ 1.43
CD40-202ENST00000372285 COG3Q96JB2 828 aa23.98■■□□□ 1.43
CD40-202ENST00000372285 TTC21AQ8NDW8 1320 aa23.98■■□□□ 1.43
CD40-202ENST00000372285 PNPLA6Q8IY17 1366 aa23.98■■□□□ 1.43
CD40-202ENST00000372285 SENP3-EIF4A1A0A087X0R7 540 aa23.98■■□□□ 1.43
CD40-202ENST00000372285 ZRANB1Q9UGI0 708 aa23.98■■□□□ 1.43
CD40-202ENST00000372285 PDE3BQ13370 1112 aa23.96■■□□□ 1.43
CD40-202ENST00000372285 OVOS2A0A0J9YW53 1432 aa23.96■■□□□ 1.43
CD40-202ENST00000372285 OVOS2Q6IE36 1432 aa23.96■■□□□ 1.43
CD40-202ENST00000372285 POLKQ9UBT6 870 aa23.95■■□□□ 1.42
CD40-202ENST00000372285 NUDCQ9Y266 331 aa23.94■■□□□ 1.42
CD40-202ENST00000372285 NCOA3Q9Y6Q9 1424 aa23.94■■□□□ 1.42
CD40-202ENST00000372285 C14orf37Q86TY3 774 aa23.93■■□□□ 1.42
CD40-202ENST00000372285 USP54Q70EL1 1684 aa23.93■■□□□ 1.42
CD40-202ENST00000372285 PHF8Q9UPP1 1060 aa23.93■■□□□ 1.42
CD40-202ENST00000372285 PIK3C2AO00443 1686 aa23.92■■□□□ 1.42
CD40-202ENST00000372285 CCDC146Q8IYE0 955 aa23.92■■□□□ 1.42
CD40-202ENST00000372285 USP31Q70CQ4 1352 aa23.91■■□□□ 1.42
CD40-202ENST00000372285 NGEFQ8N5V2 710 aa23.91■■□□□ 1.42
CD40-202ENST00000372285 SALL2Q9Y467 1007 aaPredicted RBP23.91■■□□□ 1.42
CD40-202ENST00000372285 CDK12Q9NYV4 1490 aaPredicted RBP23.91■■□□□ 1.42
CD40-202ENST00000372285 C19orf44Q9H6X5 657 aa23.9■■□□□ 1.42
CD40-202ENST00000372285 FBLN1P23142 703 aa23.89■■□□□ 1.41
CD40-202ENST00000372285 RUNDC1Q96C34 613 aa23.88■■□□□ 1.41
CD40-202ENST00000372285 TMEM94Q12767 1356 aa23.88■■□□□ 1.41
CD40-202ENST00000372285 ZNF521Q96K83 1311 aa23.88■■□□□ 1.41
CD40-202ENST00000372285 APAF1O14727 1248 aa23.87■■□□□ 1.41
CD40-202ENST00000372285 DIAPH1O60610 1272 aaKnown RBP23.87■■□□□ 1.41
CD40-202ENST00000372285 DCCP43146 1447 aa23.87■■□□□ 1.41
CD40-202ENST00000372285 MARF1Q9Y4F3 1742 aaKnown RBP23.87■■□□□ 1.41
CD40-202ENST00000372285 IQSEC2Q5JU85 1478 aa23.86■■□□□ 1.41
CD40-202ENST00000372285 LRRC7Q96NW7 1537 aa23.86■■□□□ 1.41
CD40-202ENST00000372285 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
CD40-202ENST00000372285 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
CD40-202ENST00000372285 SUPT16HQ9Y5B9 1047 aaKnown RBP23.86■■□□□ 1.41
CD40-202ENST00000372285 EMILIN1Q9Y6C2 1016 aa23.86■■□□□ 1.41
CD40-202ENST00000372285 XIRP1Q702N8 1843 aaKnown RBP23.86■■□□□ 1.41
CD40-202ENST00000372285 KIF1AQ12756 1690 aa23.86■■□□□ 1.41
CD40-202ENST00000372285 ESCO1Q5FWF5 840 aa23.84■■□□□ 1.41
CD40-202ENST00000372285 C1orf167Q5SNV9 1468 aa23.83■■□□□ 1.41
CD40-202ENST00000372285 PPM1GO15355 546 aaPredicted RBP23.82■■□□□ 1.4
CD40-202ENST00000372285 U2SURPO15042 1029 aaKnown RBP23.81■■□□□ 1.4
CD40-202ENST00000372285 NEFLP07196 543 aa23.81■■□□□ 1.4
CD40-202ENST00000372285 NCBP3Q53F19 620 aaKnown RBP23.81■■□□□ 1.4
CD40-202ENST00000372285 RRS1Q15050 365 aaKnown RBP23.81■■□□□ 1.4
CD40-202ENST00000372285 CDCA7LQ96GN5 454 aa23.81■■□□□ 1.4
CD40-202ENST00000372285 PEAK1Q9H792 1746 aa23.8■■□□□ 1.4
CD40-202ENST00000372285 MST1RQ04912 1400 aa23.79■■□□□ 1.4
CD40-202ENST00000372285 TCP11L2Q8N4U5 519 aa23.79■■□□□ 1.4
CD40-202ENST00000372285 ORAI2Q96SN7 254 aa23.79■■□□□ 1.4
CD40-202ENST00000372285 IL13P35225 146 aa23.79■■□□□ 1.4
CD40-202ENST00000372285 ATF3P18847 181 aa23.78■■□□□ 1.4
CD40-202ENST00000372285 NLRP6P59044 892 aa23.78■■□□□ 1.4
CD40-202ENST00000372285 PSME1Q06323 249 aa23.78■■□□□ 1.4
CD40-202ENST00000372285 PLEKHF1Q96S99 279 aa23.78■■□□□ 1.4
CD40-202ENST00000372285 GOLGA2Q08379 1002 aa23.77■■□□□ 1.4
CD40-202ENST00000372285 FKBP8Q14318 412 aa23.77■■□□□ 1.4
CD40-202ENST00000372285 PNNQ9H307 717 aaKnown RBP23.77■■□□□ 1.4
CD40-202ENST00000372285 TRPM3Q9HCF6 1732 aaPredicted RBP23.76■■□□□ 1.39
CD40-202ENST00000372285 ABTB2Q8N961 1025 aa23.76■■□□□ 1.39
CD40-202ENST00000372285 FCHSD2O94868 740 aa23.76■■□□□ 1.39
CD40-202ENST00000372285 PHF23Q9BUL5 403 aaPredicted RBP23.76■■□□□ 1.39
CD40-202ENST00000372285 PAK3O75914 559 aaPredicted RBP23.75■■□□□ 1.39
CD40-202ENST00000372285 MSH6P52701 1360 aa23.75■■□□□ 1.39
CD40-202ENST00000372285 RNF123Q5XPI4 1314 aa23.74■■□□□ 1.39
CD40-202ENST00000372285 CCDC27Q2M243 656 aa23.74■■□□□ 1.39
CD40-202ENST00000372285 CADPS2Q86UW7 1296 aa23.74■■□□□ 1.39
CD40-202ENST00000372285 WWC1Q8IX03 1113 aa23.73■■□□□ 1.39
CD40-202ENST00000372285 SLFN5Q08AF3 891 aa23.73■■□□□ 1.39
CD40-202ENST00000372285 TRMT2AQ8IZ69 625 aaKnown RBP23.73■■□□□ 1.39
CD40-202ENST00000372285 SBNO1A3KN83 1393 aa23.72■■□□□ 1.39
CD40-202ENST00000372285 MAP3K19Q56UN5 1328 aa23.72■■□□□ 1.39
CD40-202ENST00000372285 ZNF335Q9H4Z2 1342 aaPredicted RBP23.72■■□□□ 1.39
CD40-202ENST00000372285 RSPH6AQ9H0K4 717 aa23.72■■□□□ 1.39
CD40-202ENST00000372285 KIF24Q5T7B8 1368 aa23.71■■□□□ 1.39
CD40-202ENST00000372285 FOXO3O43524 673 aa23.71■■□□□ 1.39
CD40-202ENST00000372285 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
CD40-202ENST00000372285 DMRT2Q9Y5R5 561 aa23.71■■□□□ 1.39
CD40-202ENST00000372285 RGPD1P0DJD0 1748 aa23.71■■□□□ 1.39
CD40-202ENST00000372285 FLT4P35916 1363 aa23.7■■□□□ 1.38
CD40-202ENST00000372285 MAPK8IP3Q9UPT6 1336 aa23.7■■□□□ 1.38
CD40-202ENST00000372285 NUTM2GQ5VZR2 741 aa23.7■■□□□ 1.38
CD40-202ENST00000372285 RRP7AQ9Y3A4 280 aaKnown RBP23.7■■□□□ 1.38
CD40-202ENST00000372285 EIF4A2Q14240 407 aaKnown RBP23.69■■□□□ 1.38
CD40-202ENST00000372285 LTN1O94822 1766 aa23.68■■□□□ 1.38
CD40-202ENST00000372285 E9PSI1 815 aa23.68■■□□□ 1.38
CD40-202ENST00000372285 SOX12O15370 315 aa23.68■■□□□ 1.38
CD40-202ENST00000372285 NFAT5O94916 1531 aa23.68■■□□□ 1.38
CD40-202ENST00000372285 ALS2Q96Q42 1657 aa23.68■■□□□ 1.38
CD40-202ENST00000372285 TMPOP42166 694 aaKnown RBP23.67■■□□□ 1.38
CD40-202ENST00000372285 NEUROD2Q15784 382 aa23.67■■□□□ 1.38
CD40-202ENST00000372285 KRT28Q7Z3Y7 464 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms