RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 RGS17Q9UGC6 210 aaPredicted RBP13.25□□□□□ -0.29
TMEM254-201ENST00000372273 A0A1W2PP64 1363 aa13.25□□□□□ -0.29
TMEM254-201ENST00000372273 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
TMEM254-201ENST00000372273 USP6P35125 1406 aa13.24□□□□□ -0.29
TMEM254-201ENST00000372273 KIF1AQ12756 1690 aa13.24□□□□□ -0.29
TMEM254-201ENST00000372273 TOPAZ1Q8N9V7 1692 aa13.24□□□□□ -0.29
TMEM254-201ENST00000372273 SBNO1A3KN83 1393 aa13.24□□□□□ -0.29
TMEM254-201ENST00000372273 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
TMEM254-201ENST00000372273 NME9Q86XW9 330 aa13.24□□□□□ -0.29
TMEM254-201ENST00000372273 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
TMEM254-201ENST00000372273 SPATA31A6Q5VVP1 1343 aa13.23□□□□□ -0.29
TMEM254-201ENST00000372273 NLRP6P59044 892 aa13.23□□□□□ -0.29
TMEM254-201ENST00000372273 CARD14Q9BXL6 1004 aa13.23□□□□□ -0.29
TMEM254-201ENST00000372273 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
TMEM254-201ENST00000372273 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
TMEM254-201ENST00000372273 FBLN1P23142 703 aa13.22□□□□□ -0.29
TMEM254-201ENST00000372273 ZC3H6P61129 1189 aaKnown RBP13.22□□□□□ -0.29
TMEM254-201ENST00000372273 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
TMEM254-201ENST00000372273 PHF23Q9BUL5 403 aaPredicted RBP13.22□□□□□ -0.29
TMEM254-201ENST00000372273 EP400Q96L91 3159 aa13.21□□□□□ -0.29
TMEM254-201ENST00000372273 MED1Q15648 1581 aaPredicted RBP13.21□□□□□ -0.29
TMEM254-201ENST00000372273 HDGFL2Q7Z4V5 671 aaPredicted RBP13.21□□□□□ -0.29
TMEM254-201ENST00000372273 NGLY1Q96IV0 654 aa13.21□□□□□ -0.29
TMEM254-201ENST00000372273 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
TMEM254-201ENST00000372273 SSH2Q76I76 1423 aa13.21□□□□□ -0.3
TMEM254-201ENST00000372273 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
TMEM254-201ENST00000372273 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
TMEM254-201ENST00000372273 YTHDC1Q96MU7 727 aaKnown RBP13.2□□□□□ -0.3
TMEM254-201ENST00000372273 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
TMEM254-201ENST00000372273 WASHC2AQ641Q2 1341 aa13.2□□□□□ -0.3
TMEM254-201ENST00000372273 ZBTB7CA1YPR0 619 aa13.2□□□□□ -0.3
TMEM254-201ENST00000372273 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
TMEM254-201ENST00000372273 CHRNA2Q15822 529 aa13.2□□□□□ -0.3
TMEM254-201ENST00000372273 ARHGEF10O15013 1369 aa13.2□□□□□ -0.3
TMEM254-201ENST00000372273 ITSN1Q15811 1721 aa13.19□□□□□ -0.3
TMEM254-201ENST00000372273 TRPM3Q9HCF6 1732 aaPredicted RBP13.19□□□□□ -0.3
TMEM254-201ENST00000372273 CNGB1Q14028 1251 aaPredicted RBP13.19□□□□□ -0.3
TMEM254-201ENST00000372273 PANK3Q9H999 370 aa13.19□□□□□ -0.3
TMEM254-201ENST00000372273 SHPRHQ149N8 1683 aa13.18□□□□□ -0.3
TMEM254-201ENST00000372273 GCP02774 474 aa13.18□□□□□ -0.3
TMEM254-201ENST00000372273 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
TMEM254-201ENST00000372273 GGNBP2Q9H3C7 697 aa13.18□□□□□ -0.3
TMEM254-201ENST00000372273 AFF2P51816 1311 aa13.17□□□□□ -0.3
TMEM254-201ENST00000372273 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
TMEM254-201ENST00000372273 NLRP13Q86W25 1043 aa13.17□□□□□ -0.3
TMEM254-201ENST00000372273 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
TMEM254-201ENST00000372273 FYB1O15117 783 aa13.16□□□□□ -0.3
TMEM254-201ENST00000372273 ILDR2Q71H61 639 aa13.16□□□□□ -0.3
TMEM254-201ENST00000372273 ALS2Q96Q42 1657 aa13.15□□□□□ -0.3
TMEM254-201ENST00000372273 PRDM11Q9NQV5 511 aa13.15□□□□□ -0.3
TMEM254-201ENST00000372273 USP21Q9UK80 565 aa13.14□□□□□ -0.31
TMEM254-201ENST00000372273 EDC4Q6P2E9 1401 aaKnown RBP13.14□□□□□ -0.31
TMEM254-201ENST00000372273 NSD3Q9BZ95 1437 aa13.14□□□□□ -0.31
TMEM254-201ENST00000372273 NINLQ9Y2I6 1382 aa13.14□□□□□ -0.31
TMEM254-201ENST00000372273 BTG4Q9NY30 223 aa13.14□□□□□ -0.31
TMEM254-201ENST00000372273 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
TMEM254-201ENST00000372273 USP19O94966 1318 aa13.13□□□□□ -0.31
TMEM254-201ENST00000372273 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
TMEM254-201ENST00000372273 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
TMEM254-201ENST00000372273 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
TMEM254-201ENST00000372273 COL22A1Q8NFW1 1626 aaPredicted RBP13.13□□□□□ -0.31
TMEM254-201ENST00000372273 FNBP4Q8N3X1 1017 aaPredicted RBP13.12□□□□□ -0.31
TMEM254-201ENST00000372273 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
TMEM254-201ENST00000372273 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
TMEM254-201ENST00000372273 PIK3C2AO00443 1686 aa13.12□□□□□ -0.31
TMEM254-201ENST00000372273 MYOM1P52179 1685 aa13.12□□□□□ -0.31
TMEM254-201ENST00000372273 BCL9LQ86UU0 1499 aa13.11□□□□□ -0.31
TMEM254-201ENST00000372273 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
TMEM254-201ENST00000372273 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
TMEM254-201ENST00000372273 AKAP12Q02952 1782 aa13.11□□□□□ -0.31
TMEM254-201ENST00000372273 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
TMEM254-201ENST00000372273 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
TMEM254-201ENST00000372273 COG3Q96JB2 828 aa13.1□□□□□ -0.31
TMEM254-201ENST00000372273 USP35Q9P2H5 1018 aa13.1□□□□□ -0.31
TMEM254-201ENST00000372273 MON2Q7Z3U7 1717 aa13.09□□□□□ -0.31
TMEM254-201ENST00000372273 DDX10Q13206 875 aaKnown RBP13.09□□□□□ -0.31
TMEM254-201ENST00000372273 UNC5CLQ8IV45 518 aa13.09□□□□□ -0.31
TMEM254-201ENST00000372273 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
TMEM254-201ENST00000372273 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
TMEM254-201ENST00000372273 PER1O15534 1290 aaPredicted RBP13.08□□□□□ -0.32
TMEM254-201ENST00000372273 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
TMEM254-201ENST00000372273 ARHGEF25Q86VW2 580 aa13.08□□□□□ -0.32
TMEM254-201ENST00000372273 CC2D1BQ5T0F9 858 aaKnown RBP13.08□□□□□ -0.32
TMEM254-201ENST00000372273 CGNL1Q0VF96 1302 aa13.07□□□□□ -0.32
TMEM254-201ENST00000372273 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
TMEM254-201ENST00000372273 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
TMEM254-201ENST00000372273 OVOS2A0A0J9YW53 1432 aa13.07□□□□□ -0.32
TMEM254-201ENST00000372273 OVOS2Q6IE36 1432 aa13.07□□□□□ -0.32
TMEM254-201ENST00000372273 ABCA3Q99758 1704 aa13.07□□□□□ -0.32
TMEM254-201ENST00000372273 SLIT2O94813 1529 aa13.06□□□□□ -0.32
TMEM254-201ENST00000372273 PPM1GO15355 546 aaPredicted RBP13.06□□□□□ -0.32
TMEM254-201ENST00000372273 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
TMEM254-201ENST00000372273 KCNH5Q8NCM2 988 aa13.06□□□□□ -0.32
TMEM254-201ENST00000372273 CRYBG1Q9Y4K1 1723 aa13.06□□□□□ -0.32
TMEM254-201ENST00000372273 RXRBP28702 533 aa13.05□□□□□ -0.32
TMEM254-201ENST00000372273 EVA1CP58658 441 aa13.05□□□□□ -0.32
TMEM254-201ENST00000372273 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
TMEM254-201ENST00000372273 LTV1Q96GA3 475 aaPredicted RBP13.05□□□□□ -0.32
TMEM254-201ENST00000372273 TRPC5Q9UL62 973 aaPredicted RBP13.05□□□□□ -0.32
TMEM254-201ENST00000372273 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 384.4 ms