RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FANCAO15360 1455 aa16.92■□□□□ 0.3
RAPGEF1-202ENST00000372190 CAGE1Q8TC20 777 aa16.92■□□□□ 0.3
RAPGEF1-202ENST00000372190 CABP1Q9NZU7 370 aa16.92■□□□□ 0.3
RAPGEF1-202ENST00000372190 AIMP1Q12904 312 aaKnown RBP16.92■□□□□ 0.3
RAPGEF1-202ENST00000372190 GPATCH11Q8N954 259 aa16.91■□□□□ 0.3
RAPGEF1-202ENST00000372190 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
RAPGEF1-202ENST00000372190 ZKSCAN2Q63HK3 967 aa16.91■□□□□ 0.3
RAPGEF1-202ENST00000372190 GAS2L2Q8NHY3 880 aa16.91■□□□□ 0.3
RAPGEF1-202ENST00000372190 GNAI1P63096 354 aa16.91■□□□□ 0.3
RAPGEF1-202ENST00000372190 ZBED9Q6R2W3 1325 aa16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 CAMSAP2Q08AD1 1489 aa16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 MRE11P49959 708 aa16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 RRP1P56182 461 aaKnown RBP16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 AXDND1Q5T1B0 1012 aaPredicted RBP16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 ANKRD20A12PQ8NF67 263 aa16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 CTDP1Q9Y5B0 961 aaPredicted RBP16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 MYO6Q9UM54 1294 aa16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
RAPGEF1-202ENST00000372190 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
RAPGEF1-202ENST00000372190 KIF6Q6ZMV9 814 aa16.89■□□□□ 0.29
RAPGEF1-202ENST00000372190 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
RAPGEF1-202ENST00000372190 VPS53Q5VIR6 699 aa16.89■□□□□ 0.29
RAPGEF1-202ENST00000372190 PRKRIP1Q9H875 184 aaPredicted RBP16.89■□□□□ 0.29
RAPGEF1-202ENST00000372190 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.29
RAPGEF1-202ENST00000372190 CLASRPQ8N2M8 674 aaKnown RBP16.88■□□□□ 0.29
RAPGEF1-202ENST00000372190 SPG7Q9UQ90 795 aa16.88■□□□□ 0.29
RAPGEF1-202ENST00000372190 NOL8Q76FK4 1167 aaKnown RBP16.88■□□□□ 0.29
RAPGEF1-202ENST00000372190 RAD21O60216 631 aa16.87■□□□□ 0.29
RAPGEF1-202ENST00000372190 CT47B1P0C2W7 299 aaPredicted RBP16.87■□□□□ 0.29
RAPGEF1-202ENST00000372190 EXOC6Q8TAG9 804 aa16.87■□□□□ 0.29
RAPGEF1-202ENST00000372190 CABP4P57796 275 aa16.87■□□□□ 0.29
RAPGEF1-202ENST00000372190 IRX3P78415 501 aaPredicted RBP16.87■□□□□ 0.29
RAPGEF1-202ENST00000372190 CCDC173Q0VFZ6 552 aa16.87■□□□□ 0.29
RAPGEF1-202ENST00000372190 NBPF1Q3BBV0 1214 aa16.86■□□□□ 0.29
RAPGEF1-202ENST00000372190 API5Q9BZZ5 524 aaKnown RBP16.86■□□□□ 0.29
RAPGEF1-202ENST00000372190 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
RAPGEF1-202ENST00000372190 HMGB1P09429 215 aaKnown RBP16.86■□□□□ 0.29
RAPGEF1-202ENST00000372190 FOXD4L5Q5VV16 416 aaPredicted RBP16.86■□□□□ 0.29
RAPGEF1-202ENST00000372190 FOXD4L4Q8WXT5 416 aaPredicted RBP16.86■□□□□ 0.29
RAPGEF1-202ENST00000372190 FBXO31Q5XUX0 539 aaPredicted RBP16.86■□□□□ 0.29
RAPGEF1-202ENST00000372190 RILPL2Q969X0 211 aa16.86■□□□□ 0.29
RAPGEF1-202ENST00000372190 MTHFSP49914 203 aa16.85■□□□□ 0.29
RAPGEF1-202ENST00000372190 PCMTD1Q96MG8 357 aaPredicted RBP16.85■□□□□ 0.29
RAPGEF1-202ENST00000372190 KIF7Q2M1P5 1343 aa16.85■□□□□ 0.29
RAPGEF1-202ENST00000372190 G3BP1Q13283 466 aaKnown RBP eCLIP16.85■□□□□ 0.29
RAPGEF1-202ENST00000372190 BCCIPQ9P287 314 aaKnown RBP eCLIP16.85■□□□□ 0.29
RAPGEF1-202ENST00000372190 ASXL2Q76L83 1435 aa16.84■□□□□ 0.29
RAPGEF1-202ENST00000372190 CHMP4CQ96CF2 233 aa16.84■□□□□ 0.29
RAPGEF1-202ENST00000372190 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
RAPGEF1-202ENST00000372190 CWC22Q9HCG8 908 aaKnown RBP16.84■□□□□ 0.29
RAPGEF1-202ENST00000372190 ROCK1Q13464 1354 aa16.84■□□□□ 0.29
RAPGEF1-202ENST00000372190 MARCH6O60337 910 aa16.84■□□□□ 0.29
RAPGEF1-202ENST00000372190 CLGNO14967 610 aa16.83■□□□□ 0.29
RAPGEF1-202ENST00000372190 IFIT2P09913 472 aaKnown RBP16.83■□□□□ 0.29
RAPGEF1-202ENST00000372190 SSR1P43307 286 aaKnown RBP16.83■□□□□ 0.29
RAPGEF1-202ENST00000372190 BBXQ8WY36 941 aaPredicted RBP16.83■□□□□ 0.29
RAPGEF1-202ENST00000372190 CENPHQ9H3R5 247 aa16.83■□□□□ 0.29
RAPGEF1-202ENST00000372190 CALCOCO1Q9P1Z2 691 aa16.83■□□□□ 0.29
RAPGEF1-202ENST00000372190 PLIN1O60240 522 aa16.83■□□□□ 0.28
RAPGEF1-202ENST00000372190 H3BQV1 296 aa16.83■□□□□ 0.28
RAPGEF1-202ENST00000372190 ZC3H6P61129 1189 aaKnown RBP16.83■□□□□ 0.28
RAPGEF1-202ENST00000372190 IFFO2Q5TF58 517 aa16.83■□□□□ 0.28
RAPGEF1-202ENST00000372190 CCDC7Q96M83 1385 aa16.83■□□□□ 0.28
RAPGEF1-202ENST00000372190 ADAMTS2O95450 1211 aa16.83■□□□□ 0.28
RAPGEF1-202ENST00000372190 EIF3JO75822 258 aaKnown RBP16.82■□□□□ 0.28
RAPGEF1-202ENST00000372190 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
RAPGEF1-202ENST00000372190 SLC12A5Q9H2X9 1139 aa16.82■□□□□ 0.28
RAPGEF1-202ENST00000372190 ANKRD45Q5TZF3 282 aa16.82■□□□□ 0.28
RAPGEF1-202ENST00000372190 CCP110O43303 1012 aa16.81■□□□□ 0.28
RAPGEF1-202ENST00000372190 NUDT16Q96DE0 195 aaKnown RBP16.81■□□□□ 0.28
RAPGEF1-202ENST00000372190 TICAM2Q86XR7 235 aa16.81■□□□□ 0.28
RAPGEF1-202ENST00000372190 ATAD2Q6PL18 1390 aa16.81■□□□□ 0.28
RAPGEF1-202ENST00000372190 AMOTL2Q9Y2J4 779 aa16.81■□□□□ 0.28
RAPGEF1-202ENST00000372190 ERICH4A6NGS2 130 aa16.8■□□□□ 0.28
RAPGEF1-202ENST00000372190 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
RAPGEF1-202ENST00000372190 NASPP49321 788 aaPredicted RBP16.8■□□□□ 0.28
RAPGEF1-202ENST00000372190 IPO4Q8TEX9 1081 aaKnown RBP16.8■□□□□ 0.28
RAPGEF1-202ENST00000372190 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
RAPGEF1-202ENST00000372190 KCNH5Q8NCM2 988 aa16.79■□□□□ 0.28
RAPGEF1-202ENST00000372190 GOLGA6L10A6NI86 522 aa16.79■□□□□ 0.28
RAPGEF1-202ENST00000372190 CHMP5Q9NZZ3 219 aa16.79■□□□□ 0.28
RAPGEF1-202ENST00000372190 HMGB2P26583 209 aaKnown RBP16.79■□□□□ 0.28
RAPGEF1-202ENST00000372190 PRKAR2BP31323 418 aa16.79■□□□□ 0.28
RAPGEF1-202ENST00000372190 SKIDA1Q1XH10 827 aa16.79■□□□□ 0.28
RAPGEF1-202ENST00000372190 NGLY1Q96IV0 654 aa16.79■□□□□ 0.28
RAPGEF1-202ENST00000372190 TNNT1P13805 278 aa16.78■□□□□ 0.28
RAPGEF1-202ENST00000372190 WAPLQ7Z5K2 1190 aa16.78■□□□□ 0.28
RAPGEF1-202ENST00000372190 NAP1L1P55209 391 aaKnown RBP16.78■□□□□ 0.28
RAPGEF1-202ENST00000372190 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
RAPGEF1-202ENST00000372190 PDIA4P13667 645 aaKnown RBP16.78■□□□□ 0.28
RAPGEF1-202ENST00000372190 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
RAPGEF1-202ENST00000372190 DDX11Q96FC9 970 aa16.78■□□□□ 0.28
RAPGEF1-202ENST00000372190 HOOK1Q9UJC3 728 aaKnown RBP16.78■□□□□ 0.28
RAPGEF1-202ENST00000372190 AKAP17AQ02040 695 aaKnown RBP16.77■□□□□ 0.28
RAPGEF1-202ENST00000372190 SYNE3Q6ZMZ3 975 aa16.77■□□□□ 0.28
RAPGEF1-202ENST00000372190 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.28
RAPGEF1-202ENST00000372190 PDCL2Q8N4E4 241 aa16.77■□□□□ 0.28
RAPGEF1-202ENST00000372190 CNTLNQ9NXG0 1405 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms