RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 ALS2Q96Q42 1657 aa17.99■□□□□ 0.47
TTC39A-204ENST00000371750 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
TTC39A-204ENST00000371750 PSME1Q06323 249 aa17.98■□□□□ 0.47
TTC39A-204ENST00000371750 ANKRD26Q9UPS8 1709 aa17.97■□□□□ 0.47
TTC39A-204ENST00000371750 TTC21BQ7Z4L5 1316 aa17.96■□□□□ 0.47
TTC39A-204ENST00000371750 MARF1Q9Y4F3 1742 aaKnown RBP17.96■□□□□ 0.47
TTC39A-204ENST00000371750 PER1O15534 1290 aaPredicted RBP17.96■□□□□ 0.47
TTC39A-204ENST00000371750 KRT28Q7Z3Y7 464 aa17.96■□□□□ 0.47
TTC39A-204ENST00000371750 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.96■□□□□ 0.47
TTC39A-204ENST00000371750 USP54Q70EL1 1684 aa17.95■□□□□ 0.46
TTC39A-204ENST00000371750 SOS2Q07890 1332 aaPredicted RBP17.95■□□□□ 0.46
TTC39A-204ENST00000371750 TNS3Q68CZ2 1445 aa17.95■□□□□ 0.46
TTC39A-204ENST00000371750 BRD4O60885 1362 aaPredicted RBP17.95■□□□□ 0.46
TTC39A-204ENST00000371750 KNSTRNQ9Y448 316 aa17.94■□□□□ 0.46
TTC39A-204ENST00000371750 SBNO1A3KN83 1393 aa17.94■□□□□ 0.46
TTC39A-204ENST00000371750 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
TTC39A-204ENST00000371750 NME9Q86XW9 330 aa17.93■□□□□ 0.46
TTC39A-204ENST00000371750 CGNL1Q0VF96 1302 aa17.93■□□□□ 0.46
TTC39A-204ENST00000371750 TTC21AQ8NDW8 1320 aa17.93■□□□□ 0.46
TTC39A-204ENST00000371750 AMER1Q5JTC6 1135 aaPredicted RBP17.92■□□□□ 0.46
TTC39A-204ENST00000371750 OVOS2A0A0J9YW53 1432 aa17.91■□□□□ 0.46
TTC39A-204ENST00000371750 OVOS2Q6IE36 1432 aa17.91■□□□□ 0.46
TTC39A-204ENST00000371750 CRYBG1Q9Y4K1 1723 aa17.91■□□□□ 0.46
TTC39A-204ENST00000371750 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
TTC39A-204ENST00000371750 ABCA3Q99758 1704 aa17.9■□□□□ 0.46
TTC39A-204ENST00000371750 MED1Q15648 1581 aaPredicted RBP17.9■□□□□ 0.46
TTC39A-204ENST00000371750 NSD2O96028 1365 aa17.9■□□□□ 0.46
TTC39A-204ENST00000371750 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
TTC39A-204ENST00000371750 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
TTC39A-204ENST00000371750 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
TTC39A-204ENST00000371750 SPATA31A3Q5VYP0 1347 aa17.9■□□□□ 0.46
TTC39A-204ENST00000371750 FYB1O15117 783 aa17.89■□□□□ 0.46
TTC39A-204ENST00000371750 CC2D1BQ5T0F9 858 aaKnown RBP17.89■□□□□ 0.46
TTC39A-204ENST00000371750 NPC1L1Q9UHC9 1359 aa17.89■□□□□ 0.45
TTC39A-204ENST00000371750 NUTM2GQ5VZR2 741 aa17.89■□□□□ 0.45
TTC39A-204ENST00000371750 LMOD2Q6P5Q4 547 aa17.88■□□□□ 0.45
TTC39A-204ENST00000371750 COL22A1Q8NFW1 1626 aaPredicted RBP17.88■□□□□ 0.45
TTC39A-204ENST00000371750 ABTB2Q8N961 1025 aa17.88■□□□□ 0.45
TTC39A-204ENST00000371750 ARHGEF10O15013 1369 aa17.87■□□□□ 0.45
TTC39A-204ENST00000371750 USP31Q70CQ4 1352 aa17.87■□□□□ 0.45
TTC39A-204ENST00000371750 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
TTC39A-204ENST00000371750 SLIT3O75094 1523 aa17.87■□□□□ 0.45
TTC39A-204ENST00000371750 SHPRHQ149N8 1683 aa17.86■□□□□ 0.45
TTC39A-204ENST00000371750 PNPLA6Q8IY17 1366 aa17.85■□□□□ 0.45
TTC39A-204ENST00000371750 NLRP6P59044 892 aa17.84■□□□□ 0.45
TTC39A-204ENST00000371750 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
TTC39A-204ENST00000371750 HSPA1LP34931 641 aa17.84■□□□□ 0.45
TTC39A-204ENST00000371750 COG3Q96JB2 828 aa17.84■□□□□ 0.45
TTC39A-204ENST00000371750 PARD3Q8TEW0 1356 aa17.84■□□□□ 0.45
TTC39A-204ENST00000371750 LRRC59Q96AG4 307 aaKnown RBP17.83■□□□□ 0.45
TTC39A-204ENST00000371750 USP19O94966 1318 aa17.83■□□□□ 0.44
TTC39A-204ENST00000371750 NFAT5O94916 1531 aa17.83■□□□□ 0.44
TTC39A-204ENST00000371750 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
TTC39A-204ENST00000371750 NLRP13Q86W25 1043 aa17.81■□□□□ 0.44
TTC39A-204ENST00000371750 FBXO41Q8TF61 875 aa17.81■□□□□ 0.44
TTC39A-204ENST00000371750 SOX12O15370 315 aa17.8■□□□□ 0.44
TTC39A-204ENST00000371750 TNNT2P45379 298 aaPredicted RBP17.8■□□□□ 0.44
TTC39A-204ENST00000371750 LTN1O94822 1766 aa17.8■□□□□ 0.44
TTC39A-204ENST00000371750 CABLES1Q8TDN4 633 aa17.79■□□□□ 0.44
TTC39A-204ENST00000371750 PRKRIP1Q9H875 184 aaPredicted RBP17.79■□□□□ 0.44
TTC39A-204ENST00000371750 JCADQ9P266 1359 aa17.78■□□□□ 0.44
TTC39A-204ENST00000371750 ANP32CO43423 234 aa17.78■□□□□ 0.44
TTC39A-204ENST00000371750 FBLN1P23142 703 aa17.77■□□□□ 0.43
TTC39A-204ENST00000371750 PEAK1Q9H792 1746 aa17.77■□□□□ 0.43
TTC39A-204ENST00000371750 MAP2P11137 1827 aaKnown RBP17.76■□□□□ 0.43
TTC39A-204ENST00000371750 RALBP1Q15311 655 aa17.76■□□□□ 0.43
TTC39A-204ENST00000371750 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
TTC39A-204ENST00000371750 SMG6Q86US8 1419 aaKnown RBP17.75■□□□□ 0.43
TTC39A-204ENST00000371750 GCP02774 474 aa17.74■□□□□ 0.43
TTC39A-204ENST00000371750 MYBBP1AQ9BQG0 1328 aaKnown RBP17.73■□□□□ 0.43
TTC39A-204ENST00000371750 PPP2R1AP30153 589 aa17.73■□□□□ 0.43
TTC39A-204ENST00000371750 RRS1Q15050 365 aaKnown RBP17.73■□□□□ 0.43
TTC39A-204ENST00000371750 KCNH5Q8NCM2 988 aa17.73■□□□□ 0.43
TTC39A-204ENST00000371750 LRP6O75581 1613 aa17.73■□□□□ 0.43
TTC39A-204ENST00000371750 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
TTC39A-204ENST00000371750 EMILIN1Q9Y6C2 1016 aa17.72■□□□□ 0.43
TTC39A-204ENST00000371750 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
TTC39A-204ENST00000371750 KIAA0232Q92628 1395 aa17.71■□□□□ 0.43
TTC39A-204ENST00000371750 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.42
TTC39A-204ENST00000371750 CDK12Q9NYV4 1490 aaPredicted RBP17.7■□□□□ 0.42
TTC39A-204ENST00000371750 COL18A1P39060 1754 aa17.7■□□□□ 0.42
TTC39A-204ENST00000371750 LMO7Q8WWI1 1683 aa17.7■□□□□ 0.42
TTC39A-204ENST00000371750 ZBTB7CA1YPR0 619 aa17.7■□□□□ 0.42
TTC39A-204ENST00000371750 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
TTC39A-204ENST00000371750 CPDO75976 1380 aa17.7■□□□□ 0.42
TTC39A-204ENST00000371750 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
TTC39A-204ENST00000371750 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
TTC39A-204ENST00000371750 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
TTC39A-204ENST00000371750 MIER1Q8N108 512 aa17.69■□□□□ 0.42
TTC39A-204ENST00000371750 PLCH1Q4KWH8 1693 aa17.69■□□□□ 0.42
TTC39A-204ENST00000371750 ABCC6O95255 1503 aa17.69■□□□□ 0.42
TTC39A-204ENST00000371750 SPATA31A6Q5VVP1 1343 aa17.69■□□□□ 0.42
TTC39A-204ENST00000371750 COL14A1Q05707 1796 aaKnown RBP17.68■□□□□ 0.42
TTC39A-204ENST00000371750 RGPD5Q99666 1765 aa17.68■□□□□ 0.42
TTC39A-204ENST00000371750 COL3A1P02461 1466 aaPredicted RBP17.68■□□□□ 0.42
TTC39A-204ENST00000371750 ARHGEF25Q86VW2 580 aa17.68■□□□□ 0.42
TTC39A-204ENST00000371750 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
TTC39A-204ENST00000371750 MTHFSP49914 203 aa17.67■□□□□ 0.42
TTC39A-204ENST00000371750 PPM1GO15355 546 aaPredicted RBP17.67■□□□□ 0.42
TTC39A-204ENST00000371750 FLT4P35916 1363 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms