RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 LMBRD1Q9NUN5 540 aa14.61□□□□□ -0.07
SMARCA1-201ENST00000371121 FAM13BQ9NYF5 915 aa14.61□□□□□ -0.07
SMARCA1-201ENST00000371121 NRXN1Q9ULB1 1477 aa14.61□□□□□ -0.07
SMARCA1-201ENST00000371121 VWDEQ8N2E2 1590 aa14.61□□□□□ -0.07
SMARCA1-201ENST00000371121 CARMIL2Q6F5E8 1435 aa14.61□□□□□ -0.07
SMARCA1-201ENST00000371121 TNNT2P45379 298 aaPredicted RBP14.61□□□□□ -0.07
SMARCA1-201ENST00000371121 CDCA8Q53HL2 280 aa14.61□□□□□ -0.07
SMARCA1-201ENST00000371121 CFAP70Q5T0N1 1121 aa14.61□□□□□ -0.07
SMARCA1-201ENST00000371121 GPT2Q8TD30 523 aa14.61□□□□□ -0.07
SMARCA1-201ENST00000371121 ZSCAN23Q3MJ62 389 aa14.6□□□□□ -0.07
SMARCA1-201ENST00000371121 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
SMARCA1-201ENST00000371121 TRIM35Q9UPQ4 493 aa14.6□□□□□ -0.07
SMARCA1-201ENST00000371121 SKOR2Q2VWA4 1001 aaPredicted RBP14.6□□□□□ -0.07
SMARCA1-201ENST00000371121 PLEKHF1Q96S99 279 aa14.6□□□□□ -0.07
SMARCA1-201ENST00000371121 COL3A1P02461 1466 aaPredicted RBP14.6□□□□□ -0.07
SMARCA1-201ENST00000371121 TET3O43151 1660 aa14.6□□□□□ -0.07
SMARCA1-201ENST00000371121 ADGRF5Q8IZF2 1346 aa14.6□□□□□ -0.07
SMARCA1-201ENST00000371121 PRIM1P49642 420 aaKnown RBP14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 LNPKQ9C0E8 428 aa14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 ZDHHC9Q9Y397 364 aa14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 ADGRL1O94910 1474 aa14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 K7ELQ4 463 aaPredicted RBP14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 GBP4Q96PP9 640 aa14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 RSPH4AQ5TD94 716 aa14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 TBC1D9Q6ZT07 1266 aa14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 NOB1Q9ULX3 412 aaKnown RBP14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 MYOM2P54296 1465 aa14.59□□□□□ -0.07
SMARCA1-201ENST00000371121 UQCRHLA0A096LP55 91 aa14.58□□□□□ -0.08
SMARCA1-201ENST00000371121 UQCRHP07919 91 aa14.58□□□□□ -0.08
SMARCA1-201ENST00000371121 EXOSC9Q06265 439 aaKnown RBP14.58□□□□□ -0.08
SMARCA1-201ENST00000371121 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.58□□□□□ -0.08
SMARCA1-201ENST00000371121 SIRT2Q8IXJ6 389 aa14.58□□□□□ -0.08
SMARCA1-201ENST00000371121 ZSCAN20P17040 1043 aaPredicted RBP14.58□□□□□ -0.08
SMARCA1-201ENST00000371121 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
SMARCA1-201ENST00000371121 MTHFSP49914 203 aa14.57□□□□□ -0.08
SMARCA1-201ENST00000371121 BMP2KLQ5H9B9 411 aa14.57□□□□□ -0.08
SMARCA1-201ENST00000371121 ATF7IPQ6VMQ6 1270 aa14.57□□□□□ -0.08
SMARCA1-201ENST00000371121 ZNF710Q8N1W2 664 aa14.57□□□□□ -0.08
SMARCA1-201ENST00000371121 HS1BP3Q53T59 392 aa14.57□□□□□ -0.08
SMARCA1-201ENST00000371121 CHD1LQ86WJ1 897 aa14.57□□□□□ -0.08
SMARCA1-201ENST00000371121 PRDM10Q9NQV6 1147 aa14.57□□□□□ -0.08
SMARCA1-201ENST00000371121 RBM27Q9P2N5 1060 aaKnown RBP14.57□□□□□ -0.08
SMARCA1-201ENST00000371121 SLC12A5Q9H2X9 1139 aa14.56□□□□□ -0.08
SMARCA1-201ENST00000371121 SBNO2Q9Y2G9 1366 aa14.56□□□□□ -0.08
SMARCA1-201ENST00000371121 TRAPPC8Q9Y2L5 1435 aa14.56□□□□□ -0.08
SMARCA1-201ENST00000371121 ADGRB1O14514 1584 aa14.56□□□□□ -0.08
SMARCA1-201ENST00000371121 HSP90AB1P08238 724 aaKnown RBP14.56□□□□□ -0.08
SMARCA1-201ENST00000371121 ITPRIPQ8IWB1 547 aa14.56□□□□□ -0.08
SMARCA1-201ENST00000371121 ABCC1P33527 1531 aa14.56□□□□□ -0.08
SMARCA1-201ENST00000371121 SMAP1Q8IYB5 467 aaPredicted RBP14.55□□□□□ -0.08
SMARCA1-201ENST00000371121 GSPT1P15170 499 aaKnown RBP14.55□□□□□ -0.08
SMARCA1-201ENST00000371121 CAVIN1Q6NZI2 390 aaKnown RBP14.55□□□□□ -0.08
SMARCA1-201ENST00000371121 ARID3AQ99856 593 aa14.55□□□□□ -0.08
SMARCA1-201ENST00000371121 DDX49Q9Y6V7 483 aaKnown RBP14.55□□□□□ -0.08
SMARCA1-201ENST00000371121 FTSJ3Q8IY81 847 aaKnown RBP14.54□□□□□ -0.08
SMARCA1-201ENST00000371121 ZKSCAN5Q9Y2L8 839 aa14.54□□□□□ -0.08
SMARCA1-201ENST00000371121 ZFYVE16Q7Z3T8 1539 aa14.54□□□□□ -0.08
SMARCA1-201ENST00000371121 TMEM63CQ9P1W3 806 aa14.54□□□□□ -0.08
SMARCA1-201ENST00000371121 KIF1BO60333 1816 aa14.53□□□□□ -0.08
SMARCA1-201ENST00000371121 TSC1Q92574 1164 aa14.53□□□□□ -0.08
SMARCA1-201ENST00000371121 SMC4Q9NTJ3 1288 aa14.53□□□□□ -0.08
SMARCA1-201ENST00000371121 DDX19BQ9UMR2 479 aa14.53□□□□□ -0.08
SMARCA1-201ENST00000371121 ZHX1Q9UKY1 873 aaPredicted RBP14.53□□□□□ -0.08
SMARCA1-201ENST00000371121 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
SMARCA1-201ENST00000371121 SETBP1Q9Y6X0 1596 aa14.53□□□□□ -0.08
SMARCA1-201ENST00000371121 TUBGCP6Q96RT7 1819 aa14.52□□□□□ -0.08
SMARCA1-201ENST00000371121 MSNP26038 577 aaKnown RBP14.52□□□□□ -0.08
SMARCA1-201ENST00000371121 MCTP1Q6DN14 999 aa14.52□□□□□ -0.08
SMARCA1-201ENST00000371121 ZGPATQ8N5A5 531 aaKnown RBP14.51□□□□□ -0.09
SMARCA1-201ENST00000371121 TULP4Q9NRJ4 1543 aa14.51□□□□□ -0.09
SMARCA1-201ENST00000371121 MORC1Q86VD1 984 aa14.51□□□□□ -0.09
SMARCA1-201ENST00000371121 PPLO60437 1756 aa14.51□□□□□ -0.09
SMARCA1-201ENST00000371121 ZBTB7BO15156 539 aaPredicted RBP14.5□□□□□ -0.09
SMARCA1-201ENST00000371121 DMTNQ08495 405 aa14.5□□□□□ -0.09
SMARCA1-201ENST00000371121 CHMP7Q8WUX9 453 aaPredicted RBP14.5□□□□□ -0.09
SMARCA1-201ENST00000371121 DYNC1I1O14576 645 aa14.5□□□□□ -0.09
SMARCA1-201ENST00000371121 C1orf115Q9H7X2 142 aa14.5□□□□□ -0.09
SMARCA1-201ENST00000371121 ARHGEF28Q8N1W1 1705 aaKnown RBP14.49□□□□□ -0.09
SMARCA1-201ENST00000371121 A0A0U1RQG5 324 aaPredicted RBP14.48□□□□□ -0.09
SMARCA1-201ENST00000371121 REREQ9P2R6 1566 aa14.48□□□□□ -0.09
SMARCA1-201ENST00000371121 CT47B1P0C2W7 299 aaPredicted RBP14.48□□□□□ -0.09
SMARCA1-201ENST00000371121 MAP7D2Q96T17 732 aa14.48□□□□□ -0.09
SMARCA1-201ENST00000371121 ABCC11Q96J66 1382 aa14.48□□□□□ -0.09
SMARCA1-201ENST00000371121 PIK3R4Q99570 1358 aa14.48□□□□□ -0.09
SMARCA1-201ENST00000371121 ANKRD26Q9UPS8 1709 aa14.48□□□□□ -0.09
SMARCA1-201ENST00000371121 TMPOP42166 694 aaKnown RBP14.47□□□□□ -0.09
SMARCA1-201ENST00000371121 KIF16BQ96L93 1317 aa14.47□□□□□ -0.09
SMARCA1-201ENST00000371121 PTMSP20962 102 aa14.47□□□□□ -0.09
SMARCA1-201ENST00000371121 TCHHQ07283 1943 aa14.47□□□□□ -0.09
SMARCA1-201ENST00000371121 ATP2B3Q16720 1220 aa14.47□□□□□ -0.09
SMARCA1-201ENST00000371121 ERCC6L2Q5T890 1561 aa14.46□□□□□ -0.09
SMARCA1-201ENST00000371121 CCDC94Q9BW85 323 aaPredicted RBP14.46□□□□□ -0.09
SMARCA1-201ENST00000371121 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.09
SMARCA1-201ENST00000371121 PLCH2O75038 1416 aa14.46□□□□□ -0.09
SMARCA1-201ENST00000371121 ADGRB3O60242 1522 aa14.46□□□□□ -0.1
SMARCA1-201ENST00000371121 SYCE3A1L190 88 aa14.45□□□□□ -0.1
SMARCA1-201ENST00000371121 UTP14CQ5TAP6 766 aaKnown RBP14.45□□□□□ -0.1
SMARCA1-201ENST00000371121 SASS6Q6UVJ0 657 aa14.45□□□□□ -0.1
SMARCA1-201ENST00000371121 PRPF40AO75400 957 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms