RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 HIRIP3Q9BW71 556 aaPredicted RBP21.89■■□□□ 1.09
SS18L1-202ENST00000370848 POLR3AO14802 1390 aaPredicted RBP21.87■■□□□ 1.09
SS18L1-202ENST00000370848 PHRF1Q9P1Y6 1649 aaKnown RBP21.87■■□□□ 1.09
SS18L1-202ENST00000370848 FAM83GA6ND36 823 aa21.86■■□□□ 1.09
SS18L1-202ENST00000370848 HAP1P54257 671 aaPredicted RBP21.85■■□□□ 1.09
SS18L1-202ENST00000370848 THSD7AQ9UPZ6 1657 aa21.84■■□□□ 1.09
SS18L1-202ENST00000370848 SEPT12Q8IYM1 358 aa21.83■■□□□ 1.09
SS18L1-202ENST00000370848 NUDT16Q96DE0 195 aaKnown RBP21.82■■□□□ 1.08
SS18L1-202ENST00000370848 LMOD2Q6P5Q4 547 aa21.81■■□□□ 1.08
SS18L1-202ENST00000370848 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
SS18L1-202ENST00000370848 PLEKHG3A1L390 1219 aa21.79■■□□□ 1.08
SS18L1-202ENST00000370848 NGDNQ8NEJ9 315 aaKnown RBP21.79■■□□□ 1.08
SS18L1-202ENST00000370848 BTG4Q9NY30 223 aa21.78■■□□□ 1.08
SS18L1-202ENST00000370848 NRKQ7Z2Y5 1582 aa21.78■■□□□ 1.08
SS18L1-202ENST00000370848 CDK19Q9BWU1 502 aa21.77■■□□□ 1.08
SS18L1-202ENST00000370848 ZRANB1Q9UGI0 708 aa21.77■■□□□ 1.08
SS18L1-202ENST00000370848 CCDC61Q9Y6R9 512 aa21.77■■□□□ 1.08
SS18L1-202ENST00000370848 SPATA31A5Q5VU36 1347 aa21.77■■□□□ 1.07
SS18L1-202ENST00000370848 SPATA31A7Q8IWB4 1347 aa21.77■■□□□ 1.07
SS18L1-202ENST00000370848 KRT27Q7Z3Y8 459 aa21.76■■□□□ 1.07
SS18L1-202ENST00000370848 LMO7Q8WWI1 1683 aa21.75■■□□□ 1.07
SS18L1-202ENST00000370848 BRD4O60885 1362 aaPredicted RBP21.75■■□□□ 1.07
SS18L1-202ENST00000370848 TONSLQ96HA7 1378 aa21.75■■□□□ 1.07
SS18L1-202ENST00000370848 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
SS18L1-202ENST00000370848 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
SS18L1-202ENST00000370848 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 RGPD1P0DJD0 1748 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 USP19O94966 1318 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 ACEP12821 1306 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 CPDO75976 1380 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 KIAA0232Q92628 1395 aa21.73■■□□□ 1.07
SS18L1-202ENST00000370848 DISP2A7MBM2 1401 aa21.72■■□□□ 1.07
SS18L1-202ENST00000370848 CCDC9Q9Y3X0 531 aaKnown RBP21.71■■□□□ 1.07
SS18L1-202ENST00000370848 CENPJQ9HC77 1338 aaPredicted RBP21.71■■□□□ 1.07
SS18L1-202ENST00000370848 TNS1Q9HBL0 1735 aaKnown RBP21.7■■□□□ 1.06
SS18L1-202ENST00000370848 PAK3O75914 559 aaPredicted RBP21.7■■□□□ 1.06
SS18L1-202ENST00000370848 PRDM11Q9NQV5 511 aa21.7■■□□□ 1.06
SS18L1-202ENST00000370848 FAM98CQ17RN3 349 aaKnown RBP21.69■■□□□ 1.06
SS18L1-202ENST00000370848 SPATA31A1Q5TZJ5 1347 aa21.69■■□□□ 1.06
SS18L1-202ENST00000370848 PLEKHG5O94827 1062 aa21.68■■□□□ 1.06
SS18L1-202ENST00000370848 PPIP5K1Q6PFW1 1433 aa21.68■■□□□ 1.06
SS18L1-202ENST00000370848 LRP5O75197 1615 aa21.68■■□□□ 1.06
SS18L1-202ENST00000370848 DEFB132Q7Z7B7 95 aa21.67■■□□□ 1.06
SS18L1-202ENST00000370848 CAMTA1Q9Y6Y1 1673 aa21.66■■□□□ 1.06
SS18L1-202ENST00000370848 SSH2Q76I76 1423 aa21.66■■□□□ 1.06
SS18L1-202ENST00000370848 SLIT3O75094 1523 aa21.65■■□□□ 1.06
SS18L1-202ENST00000370848 ROCK2O75116 1388 aaKnown RBP21.65■■□□□ 1.06
SS18L1-202ENST00000370848 SF3B2Q13435 895 aaKnown RBP21.65■■□□□ 1.06
SS18L1-202ENST00000370848 USP6P35125 1406 aa21.64■■□□□ 1.06
SS18L1-202ENST00000370848 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
SS18L1-202ENST00000370848 BARGINQ6ZT62 677 aa21.62■■□□□ 1.05
SS18L1-202ENST00000370848 CLSPNQ9HAW4 1339 aa21.61■■□□□ 1.05
SS18L1-202ENST00000370848 PARP4Q9UKK3 1724 aaKnown RBP21.61■■□□□ 1.05
SS18L1-202ENST00000370848 PIK3C2AO00443 1686 aa21.61■■□□□ 1.05
SS18L1-202ENST00000370848 BAG6P46379 1132 aa21.61■■□□□ 1.05
SS18L1-202ENST00000370848 CHRNA2Q15822 529 aa21.6■■□□□ 1.05
SS18L1-202ENST00000370848 ABTB2Q8N961 1025 aa21.6■■□□□ 1.05
SS18L1-202ENST00000370848 COL5A2P05997 1499 aaPredicted RBP21.59■■□□□ 1.05
SS18L1-202ENST00000370848 AKAP12Q02952 1782 aa21.59■■□□□ 1.05
SS18L1-202ENST00000370848 ZC3H6P61129 1189 aaKnown RBP21.59■■□□□ 1.05
SS18L1-202ENST00000370848 SRPK2P78362 688 aaKnown RBP21.59■■□□□ 1.05
SS18L1-202ENST00000370848 NLRP13Q86W25 1043 aa21.59■■□□□ 1.05
SS18L1-202ENST00000370848 SBNO2Q9Y2G9 1366 aa21.59■■□□□ 1.05
SS18L1-202ENST00000370848 GCP02774 474 aa21.58■■□□□ 1.05
SS18L1-202ENST00000370848 CABP2Q9NPB3 220 aa21.58■■□□□ 1.05
SS18L1-202ENST00000370848 COL18A1P39060 1754 aa21.58■■□□□ 1.04
SS18L1-202ENST00000370848 A0A0G2JS52 829 aa21.57■■□□□ 1.04
SS18L1-202ENST00000370848 MYT1Q01538 1121 aa21.57■■□□□ 1.04
SS18L1-202ENST00000370848 NUTM2GQ5VZR2 741 aa21.56■■□□□ 1.04
SS18L1-202ENST00000370848 THRAP3Q9Y2W1 955 aaKnown RBP21.56■■□□□ 1.04
SS18L1-202ENST00000370848 RREB1Q92766 1687 aa21.56■■□□□ 1.04
SS18L1-202ENST00000370848 CARD11Q9BXL7 1154 aa21.55■■□□□ 1.04
SS18L1-202ENST00000370848 AATKQ6ZMQ8 1374 aa21.55■■□□□ 1.04
SS18L1-202ENST00000370848 PARD3Q8TEW0 1356 aa21.55■■□□□ 1.04
SS18L1-202ENST00000370848 EVC2Q86UK5 1308 aa21.55■■□□□ 1.04
SS18L1-202ENST00000370848 USP54Q70EL1 1684 aa21.54■■□□□ 1.04
SS18L1-202ENST00000370848 CABP1Q9NZU7 370 aa21.54■■□□□ 1.04
SS18L1-202ENST00000370848 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
SS18L1-202ENST00000370848 PEAK1Q9H792 1746 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 FAM196AQ6ZSG2 479 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 STRN4Q9NRL3 753 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 ABCC6O95255 1503 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 CRB1P82279 1406 aa21.53■■□□□ 1.04
SS18L1-202ENST00000370848 WNK3Q9BYP7 1800 aa21.52■■□□□ 1.04
SS18L1-202ENST00000370848 LARP1Q6PKG0 1096 aaKnown RBP21.52■■□□□ 1.04
SS18L1-202ENST00000370848 TCP11L2Q8N4U5 519 aa21.52■■□□□ 1.04
SS18L1-202ENST00000370848 MON2Q7Z3U7 1717 aa21.52■■□□□ 1.03
SS18L1-202ENST00000370848 FAM182BQ5T319 152 aa21.51■■□□□ 1.03
SS18L1-202ENST00000370848 EN1Q05925 392 aaPredicted RBP21.5■■□□□ 1.03
SS18L1-202ENST00000370848 RGPD3A6NKT7 1758 aaPredicted RBP21.5■■□□□ 1.03
SS18L1-202ENST00000370848 RGPD4Q7Z3J3 1758 aa21.5■■□□□ 1.03
SS18L1-202ENST00000370848 LRRC37A3O60309 1634 aa21.5■■□□□ 1.03
SS18L1-202ENST00000370848 CAMKK2Q96RR4 588 aa21.49■■□□□ 1.03
SS18L1-202ENST00000370848 ZNF692Q9BU19 519 aaPredicted RBP21.49■■□□□ 1.03
SS18L1-202ENST00000370848 EVA1CP58658 441 aa21.48■■□□□ 1.03
SS18L1-202ENST00000370848 NUP188Q5SRE5 1749 aa21.48■■□□□ 1.03
SS18L1-202ENST00000370848 NFAT5O94916 1531 aa21.48■■□□□ 1.03
SS18L1-202ENST00000370848 C11orf95C9JLR9 678 aaPredicted RBP21.47■■□□□ 1.03
SS18L1-202ENST00000370848 TIMELESSQ9UNS1 1208 aa21.47■■□□□ 1.03
SS18L1-202ENST00000370848 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms