RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 ONECUT3O60422 494 aaPredicted RBP19.15■□□□□ 0.66
RPF1-201ENST00000370654 KIAA1210Q9ULL0 1709 aa19.14■□□□□ 0.65
RPF1-201ENST00000370654 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
RPF1-201ENST00000370654 DEFB132Q7Z7B7 95 aa19.12■□□□□ 0.65
RPF1-201ENST00000370654 TOPAZ1Q8N9V7 1692 aa19.11■□□□□ 0.65
RPF1-201ENST00000370654 ACEP12821 1306 aa19.11■□□□□ 0.65
RPF1-201ENST00000370654 SIN3AQ96ST3 1273 aa19.11■□□□□ 0.65
RPF1-201ENST00000370654 COL14A1Q05707 1796 aaKnown RBP19.11■□□□□ 0.65
RPF1-201ENST00000370654 ITSN1Q15811 1721 aa19.11■□□□□ 0.65
RPF1-201ENST00000370654 FAM98CQ17RN3 349 aaKnown RBP19.1■□□□□ 0.65
RPF1-201ENST00000370654 CCDC125Q86Z20 511 aa19.1■□□□□ 0.65
RPF1-201ENST00000370654 POLR3AO14802 1390 aaPredicted RBP19.1■□□□□ 0.65
RPF1-201ENST00000370654 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
RPF1-201ENST00000370654 L3MBTL2Q969R5 705 aa19.09■□□□□ 0.65
RPF1-201ENST00000370654 BLMP54132 1417 aaPredicted RBP19.09■□□□□ 0.65
RPF1-201ENST00000370654 PLEKHG3A1L390 1219 aa19.08■□□□□ 0.65
RPF1-201ENST00000370654 CHRNA2Q15822 529 aa19.08■□□□□ 0.65
RPF1-201ENST00000370654 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.65
RPF1-201ENST00000370654 CCDC61Q9Y6R9 512 aa19.08■□□□□ 0.65
RPF1-201ENST00000370654 KIAA0232Q92628 1395 aa19.08■□□□□ 0.64
RPF1-201ENST00000370654 PRDM11Q9NQV5 511 aa19.07■□□□□ 0.64
RPF1-201ENST00000370654 PHRF1Q9P1Y6 1649 aaKnown RBP19.07■□□□□ 0.64
RPF1-201ENST00000370654 SPATA31A5Q5VU36 1347 aa19.07■□□□□ 0.64
RPF1-201ENST00000370654 SPATA31A7Q8IWB4 1347 aa19.07■□□□□ 0.64
RPF1-201ENST00000370654 ZC3H6P61129 1189 aaKnown RBP19.06■□□□□ 0.64
RPF1-201ENST00000370654 FAM182BQ5T319 152 aa19.06■□□□□ 0.64
RPF1-201ENST00000370654 CABP2Q9NPB3 220 aa19.06■□□□□ 0.64
RPF1-201ENST00000370654 A0A0G2JS52 829 aa19.06■□□□□ 0.64
RPF1-201ENST00000370654 MYT1Q01538 1121 aa19.06■□□□□ 0.64
RPF1-201ENST00000370654 ZRANB1Q9UGI0 708 aa19.06■□□□□ 0.64
RPF1-201ENST00000370654 CENPJQ9HC77 1338 aaPredicted RBP19.05■□□□□ 0.64
RPF1-201ENST00000370654 SRCAPQ6ZRS2 3230 aa19.04■□□□□ 0.64
RPF1-201ENST00000370654 SRPK2P78362 688 aaKnown RBP19.03■□□□□ 0.64
RPF1-201ENST00000370654 PPIP5K1Q6PFW1 1433 aa19.02■□□□□ 0.64
RPF1-201ENST00000370654 NEUROD1Q13562 356 aa19.02■□□□□ 0.64
RPF1-201ENST00000370654 STRN4Q9NRL3 753 aa19.02■□□□□ 0.64
RPF1-201ENST00000370654 QRICH2Q9H0J4 1663 aa19.02■□□□□ 0.63
RPF1-201ENST00000370654 ABTB2Q8N961 1025 aa19.01■□□□□ 0.63
RPF1-201ENST00000370654 THSD7AQ9UPZ6 1657 aa19.01■□□□□ 0.63
RPF1-201ENST00000370654 NRKQ7Z2Y5 1582 aa19.01■□□□□ 0.63
RPF1-201ENST00000370654 SPATA31A1Q5TZJ5 1347 aa19.01■□□□□ 0.63
RPF1-201ENST00000370654 CABP1Q9NZU7 370 aa18.99■□□□□ 0.63
RPF1-201ENST00000370654 USP19O94966 1318 aa18.99■□□□□ 0.63
RPF1-201ENST00000370654 CAMTA1Q9Y6Y1 1673 aa18.99■□□□□ 0.63
RPF1-201ENST00000370654 TRPM1Q7Z4N2 1603 aa18.98■□□□□ 0.63
RPF1-201ENST00000370654 SF3B2Q13435 895 aaKnown RBP18.97■□□□□ 0.63
RPF1-201ENST00000370654 LARP1Q6PKG0 1096 aaKnown RBP18.96■□□□□ 0.63
RPF1-201ENST00000370654 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
RPF1-201ENST00000370654 LMO7Q8WWI1 1683 aa18.95■□□□□ 0.62
RPF1-201ENST00000370654 SSH2Q76I76 1423 aa18.95■□□□□ 0.62
RPF1-201ENST00000370654 GCP02774 474 aa18.94■□□□□ 0.62
RPF1-201ENST00000370654 EN1Q05925 392 aaPredicted RBP18.93■□□□□ 0.62
RPF1-201ENST00000370654 CPDO75976 1380 aa18.93■□□□□ 0.62
RPF1-201ENST00000370654 USP6P35125 1406 aa18.93■□□□□ 0.62
RPF1-201ENST00000370654 EVA1CP58658 441 aa18.93■□□□□ 0.62
RPF1-201ENST00000370654 NLRP13Q86W25 1043 aa18.93■□□□□ 0.62
RPF1-201ENST00000370654 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
RPF1-201ENST00000370654 PSDA5PKW4 1024 aaPredicted RBP18.91■□□□□ 0.62
RPF1-201ENST00000370654 BAG6P46379 1132 aa18.91■□□□□ 0.62
RPF1-201ENST00000370654 TNS1Q9HBL0 1735 aaKnown RBP18.9■□□□□ 0.62
RPF1-201ENST00000370654 EVC2Q86UK5 1308 aa18.9■□□□□ 0.62
RPF1-201ENST00000370654 NLRP6P59044 892 aa18.9■□□□□ 0.62
RPF1-201ENST00000370654 RGPD1P0DJD0 1748 aa18.89■□□□□ 0.61
RPF1-201ENST00000370654 ZBTB7CA1YPR0 619 aa18.89■□□□□ 0.61
RPF1-201ENST00000370654 TRIM37O94972 964 aa18.89■□□□□ 0.61
RPF1-201ENST00000370654 BARGINQ6ZT62 677 aa18.89■□□□□ 0.61
RPF1-201ENST00000370654 PIK3C2AO00443 1686 aa18.89■□□□□ 0.61
RPF1-201ENST00000370654 COL5A2P05997 1499 aaPredicted RBP18.88■□□□□ 0.61
RPF1-201ENST00000370654 SLIT3O75094 1523 aa18.88■□□□□ 0.61
RPF1-201ENST00000370654 EZH2Q15910 746 aaKnown RBP18.87■□□□□ 0.61
RPF1-201ENST00000370654 TCP11L2Q8N4U5 519 aa18.87■□□□□ 0.61
RPF1-201ENST00000370654 BRD4O60885 1362 aaPredicted RBP18.86■□□□□ 0.61
RPF1-201ENST00000370654 AXIN2Q9Y2T1 843 aa18.86■□□□□ 0.61
RPF1-201ENST00000370654 TTC21BQ7Z4L5 1316 aa18.85■□□□□ 0.61
RPF1-201ENST00000370654 FAM196AQ6ZSG2 479 aa18.85■□□□□ 0.61
RPF1-201ENST00000370654 DISP2A7MBM2 1401 aa18.85■□□□□ 0.61
RPF1-201ENST00000370654 COL18A1P39060 1754 aa18.85■□□□□ 0.61
RPF1-201ENST00000370654 CAMKK2Q96RR4 588 aa18.84■□□□□ 0.61
RPF1-201ENST00000370654 AKAP12Q02952 1782 aa18.84■□□□□ 0.61
RPF1-201ENST00000370654 AATKQ6ZMQ8 1374 aa18.83■□□□□ 0.6
RPF1-201ENST00000370654 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.6
RPF1-201ENST00000370654 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
RPF1-201ENST00000370654 SOX12O15370 315 aa18.81■□□□□ 0.6
RPF1-201ENST00000370654 R3HDM1Q15032 1099 aaKnown RBP18.81■□□□□ 0.6
RPF1-201ENST00000370654 CRB1P82279 1406 aa18.81■□□□□ 0.6
RPF1-201ENST00000370654 APBA3O96018 575 aa18.81■□□□□ 0.6
RPF1-201ENST00000370654 ARHGEF25Q86VW2 580 aa18.8■□□□□ 0.6
RPF1-201ENST00000370654 ZNF692Q9BU19 519 aaPredicted RBP18.8■□□□□ 0.6
RPF1-201ENST00000370654 CARD11Q9BXL7 1154 aa18.8■□□□□ 0.6
RPF1-201ENST00000370654 THRAP3Q9Y2W1 955 aaKnown RBP18.8■□□□□ 0.6
RPF1-201ENST00000370654 PARP4Q9UKK3 1724 aaKnown RBP18.79■□□□□ 0.6
RPF1-201ENST00000370654 CD163L1Q9NR16 1453 aa18.79■□□□□ 0.6
RPF1-201ENST00000370654 LRP5O75197 1615 aa18.79■□□□□ 0.6
RPF1-201ENST00000370654 RGPD5Q99666 1765 aa18.78■□□□□ 0.6
RPF1-201ENST00000370654 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
RPF1-201ENST00000370654 NFAT5O94916 1531 aa18.77■□□□□ 0.6
RPF1-201ENST00000370654 TOM1L2Q6ZVM7 507 aa18.77■□□□□ 0.6
RPF1-201ENST00000370654 PTF1AQ7RTS3 328 aa18.77■□□□□ 0.6
RPF1-201ENST00000370654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.76■□□□□ 0.59
RPF1-201ENST00000370654 PEAK1Q9H792 1746 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms