RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SAFBQ15424 915 aaKnown RBP eCLIP20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 NOM1Q5C9Z4 860 aaKnown RBP20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 ZSCAN30Q86W11 494 aa20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 SKAP1Q86WV1 359 aa20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 OLFM4Q6UX06 510 aa20.54■□□□□ 0.88
PTP4A1-201ENST00000370651 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
PTP4A1-201ENST00000370651 FSD1Q9BTV5 496 aa20.54■□□□□ 0.88
PTP4A1-201ENST00000370651 CCDC192P0DO97 292 aa20.54■□□□□ 0.88
PTP4A1-201ENST00000370651 MPNDQ8N594 471 aa20.54■□□□□ 0.88
PTP4A1-201ENST00000370651 GNAI2P04899 355 aa20.53■□□□□ 0.88
PTP4A1-201ENST00000370651 C20orf194Q5TEA3 1177 aa20.53■□□□□ 0.88
PTP4A1-201ENST00000370651 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
PTP4A1-201ENST00000370651 PRKCSHP14314 528 aaPredicted RBP20.52■□□□□ 0.88
PTP4A1-201ENST00000370651 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
PTP4A1-201ENST00000370651 PDILTQ8N807 584 aa20.52■□□□□ 0.87
PTP4A1-201ENST00000370651 VPS53Q5VIR6 699 aa20.51■□□□□ 0.87
PTP4A1-201ENST00000370651 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
PTP4A1-201ENST00000370651 C9orf84Q5VXU9 1444 aa20.51■□□□□ 0.87
PTP4A1-201ENST00000370651 RUFY1Q96T51 708 aa20.5■□□□□ 0.87
PTP4A1-201ENST00000370651 SMC2O95347 1197 aa20.5■□□□□ 0.87
PTP4A1-201ENST00000370651 NCBP3Q53F19 620 aaKnown RBP20.5■□□□□ 0.87
PTP4A1-201ENST00000370651 NEUROD6Q96NK8 337 aa20.5■□□□□ 0.87
PTP4A1-201ENST00000370651 AK7Q96M32 723 aa20.5■□□□□ 0.87
PTP4A1-201ENST00000370651 CWC15Q9P013 229 aaKnown RBP20.5■□□□□ 0.87
PTP4A1-201ENST00000370651 RIC3Q7Z5B4 369 aa20.49■□□□□ 0.87
PTP4A1-201ENST00000370651 CCDC112Q8NEF3 446 aa20.49■□□□□ 0.87
PTP4A1-201ENST00000370651 FMNL2Q96PY5 1086 aa20.49■□□□□ 0.87
PTP4A1-201ENST00000370651 HIP1O00291 1037 aa20.48■□□□□ 0.87
PTP4A1-201ENST00000370651 AEBP1Q8IUX7 1158 aa20.48■□□□□ 0.87
PTP4A1-201ENST00000370651 ERICH2A1L162 156 aa20.48■□□□□ 0.87
PTP4A1-201ENST00000370651 CCP110O43303 1012 aa20.48■□□□□ 0.87
PTP4A1-201ENST00000370651 TMX4Q9H1E5 349 aaPredicted RBP20.48■□□□□ 0.87
PTP4A1-201ENST00000370651 WASHC4Q2M389 1173 aa20.47■□□□□ 0.87
PTP4A1-201ENST00000370651 DAPK1P53355 1430 aa20.47■□□□□ 0.87
PTP4A1-201ENST00000370651 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
PTP4A1-201ENST00000370651 AIMP1Q12904 312 aaKnown RBP20.47■□□□□ 0.87
PTP4A1-201ENST00000370651 LRRCC1Q9C099 1032 aa20.47■□□□□ 0.87
PTP4A1-201ENST00000370651 CYP46A1Q9Y6A2 500 aa20.47■□□□□ 0.87
PTP4A1-201ENST00000370651 KRT85P78386 507 aa20.46■□□□□ 0.87
PTP4A1-201ENST00000370651 TNMDQ9H2S6 317 aa20.46■□□□□ 0.87
PTP4A1-201ENST00000370651 NCAPD3P42695 1498 aa20.46■□□□□ 0.87
PTP4A1-201ENST00000370651 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
PTP4A1-201ENST00000370651 CCT4P50991 539 aaKnown RBP20.45■□□□□ 0.86
PTP4A1-201ENST00000370651 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
PTP4A1-201ENST00000370651 AQRO60306 1485 aaKnown RBP eCLIP20.45■□□□□ 0.862e-8■■■■■ 37.7
PTP4A1-201ENST00000370651 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
PTP4A1-201ENST00000370651 ZNF396Q96N95 335 aaPredicted RBP20.45■□□□□ 0.86
PTP4A1-201ENST00000370651 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
PTP4A1-201ENST00000370651 TMEM57Q8N5G2 664 aa20.44■□□□□ 0.86
PTP4A1-201ENST00000370651 ERCC4Q92889 916 aaPredicted RBP20.44■□□□□ 0.86
PTP4A1-201ENST00000370651 TBC1D2Q9BYX2 928 aa20.44■□□□□ 0.86
PTP4A1-201ENST00000370651 ARHGAP5Q13017 1502 aa20.44■□□□□ 0.86
PTP4A1-201ENST00000370651 PLEKHH2Q8IVE3 1493 aa20.43■□□□□ 0.86
PTP4A1-201ENST00000370651 CEBPZQ03701 1054 aaKnown RBP20.43■□□□□ 0.86
PTP4A1-201ENST00000370651 SYCE3A1L190 88 aa20.42■□□□□ 0.86
PTP4A1-201ENST00000370651 ERC1Q8IUD2 1116 aa20.42■□□□□ 0.86
PTP4A1-201ENST00000370651 PATL2C9JE40 543 aaKnown RBP20.42■□□□□ 0.86
PTP4A1-201ENST00000370651 STK38Q15208 465 aa20.42■□□□□ 0.86
PTP4A1-201ENST00000370651 NCOA1Q15788 1441 aa20.42■□□□□ 0.86
PTP4A1-201ENST00000370651 CDR1P51861 262 aa20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 RARSP54136 660 aaKnown RBP20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 DHX8Q14562 1220 aaKnown RBP20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 ANKRD1Q15327 319 aa20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 LARP1BQ659C4 914 aaKnown RBP20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 AMOTL1Q8IY63 956 aa20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 SRCIN1Q9C0H9 1055 aa20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 ANKRD30BQ9BXX2 1392 aa20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 G3V3G9 751 aa20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 NAP1L1P55209 391 aaKnown RBP20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 DCAF8Q5TAQ9 597 aa20.41■□□□□ 0.86
PTP4A1-201ENST00000370651 RPAP2Q8IXW5 612 aaPredicted RBP20.4■□□□□ 0.86
PTP4A1-201ENST00000370651 PSME1Q06323 249 aa20.4■□□□□ 0.86
PTP4A1-201ENST00000370651 TROQ12816 1431 aaPredicted RBP20.39■□□□□ 0.86
PTP4A1-201ENST00000370651 SUPT6HQ7KZ85 1726 aaKnown RBP20.39■□□□□ 0.86
PTP4A1-201ENST00000370651 TTLL5Q6EMB2 1281 aa20.39■□□□□ 0.86
PTP4A1-201ENST00000370651 NKTRP30414 1462 aaKnown RBP20.39■□□□□ 0.85
PTP4A1-201ENST00000370651 DNAJC2Q99543 621 aaKnown RBP20.39■□□□□ 0.85
PTP4A1-201ENST00000370651 PRAM1Q96QH2 718 aa20.39■□□□□ 0.85
PTP4A1-201ENST00000370651 DHX16O60231 1041 aaKnown RBP20.38■□□□□ 0.85
PTP4A1-201ENST00000370651 CAGE1Q8TC20 777 aa20.38■□□□□ 0.85
PTP4A1-201ENST00000370651 NLRP6P59044 892 aa20.38■□□□□ 0.85
PTP4A1-201ENST00000370651 PRG4Q92954 1404 aaPredicted RBP20.38■□□□□ 0.85
PTP4A1-201ENST00000370651 SULT6B1Q6IMI4 303 aa20.38■□□□□ 0.85
PTP4A1-201ENST00000370651 TMPOP42166 694 aaKnown RBP20.37■□□□□ 0.85
PTP4A1-201ENST00000370651 RAPGEF4Q8WZA2 1011 aa20.37■□□□□ 0.85
PTP4A1-201ENST00000370651 NUP62CLQ9H1M0 184 aa20.37■□□□□ 0.85
PTP4A1-201ENST00000370651 LRPPRCP42704 1394 aaKnown RBP20.37■□□□□ 0.85
PTP4A1-201ENST00000370651 XBP1P17861 261 aa20.37■□□□□ 0.85
PTP4A1-201ENST00000370651 HDGFL1Q5TGJ6 251 aa20.37■□□□□ 0.85
PTP4A1-201ENST00000370651 NOL10Q9BSC4 688 aaKnown RBP20.37■□□□□ 0.85
PTP4A1-201ENST00000370651 STK3Q13188 491 aa20.36■□□□□ 0.85
PTP4A1-201ENST00000370651 FILIP1LQ4L180 1135 aa20.36■□□□□ 0.85
PTP4A1-201ENST00000370651 LEKR1Q6ZMV7 388 aa20.36■□□□□ 0.85
PTP4A1-201ENST00000370651 TNPO1Q92973 898 aaKnown RBP20.36■□□□□ 0.85
PTP4A1-201ENST00000370651 BRMS1Q9HCU9 246 aa20.36■□□□□ 0.85
PTP4A1-201ENST00000370651 ME1P48163 572 aa20.36■□□□□ 0.85
PTP4A1-201ENST00000370651 PDCL2Q8N4E4 241 aa20.36■□□□□ 0.85
PTP4A1-201ENST00000370651 SERPINC1P01008 464 aa20.36■□□□□ 0.85
PTP4A1-201ENST00000370651 ZSCAN31Q96LW9 406 aaPredicted RBP20.36■□□□□ 0.85
PTP4A1-201ENST00000370651 SYNJ2O15056 1496 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms