RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 CDC42BPBQ9Y5S2 1711 aa8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 TRIM6-TRIM34B2RNG4 842 aa8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 FOXD4L1Q9NU39 408 aa8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 YTHDC2Q9H6S0 1430 aaKnown RBP8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 FANCIQ9NVI1 1328 aa8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 NEO1Q92859 1461 aa8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 LTKP29376 864 aa8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 AEBP1Q8IUX7 1158 aa8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 PDZRN3Q9UPQ7 1066 aa8.92□□□□□ -0.98
TGFBR3-202ENST00000370399 MAGI2Q86UL8 1455 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 KCNA6P17658 529 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 EVA1CP58658 441 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 RAPGEF4Q8WZA2 1011 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 CHMP3Q9Y3E7 222 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 ADCY10Q96PN6 1610 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 HMMRO75330 724 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 PHF8Q9UPP1 1060 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 AIMP1Q12904 312 aaKnown RBP8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 HSCBQ8IWL3 235 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 TMEM57Q8N5G2 664 aa8.91□□□□□ -0.98
TGFBR3-202ENST00000370399 TAOK2Q9UL54 1235 aa8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 PRDM15P57071 1507 aaPredicted RBP8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 ZFYVE16Q7Z3T8 1539 aa8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 LRPPRCP42704 1394 aaKnown RBP8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 EIF2AK4Q9P2K8 1649 aaKnown RBP8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 NCLP19338 710 aaKnown RBP8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 KCNJ4P48050 445 aa8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 PHACTR3Q96KR7 559 aa8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 MVPQ14764 893 aaKnown RBP8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 GAS2L2Q8NHY3 880 aa8.9□□□□□ -0.98
TGFBR3-202ENST00000370399 TTC21BQ7Z4L5 1316 aa8.89□□□□□ -0.99
TGFBR3-202ENST00000370399 PPIP5K1Q6PFW1 1433 aa8.89□□□□□ -0.99
TGFBR3-202ENST00000370399 MLH3Q9UHC1 1453 aa8.89□□□□□ -0.99
TGFBR3-202ENST00000370399 CLASP1Q7Z460 1538 aa8.89□□□□□ -0.99
TGFBR3-202ENST00000370399 PTPRTO14522 1441 aa8.89□□□□□ -0.99
TGFBR3-202ENST00000370399 KDM5CP41229 1560 aa8.89□□□□□ -0.99
TGFBR3-202ENST00000370399 NKTRP30414 1462 aaKnown RBP8.89□□□□□ -0.99
TGFBR3-202ENST00000370399 ZNF530Q6P9A1 599 aaPredicted RBP8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 RILPL2Q969X0 211 aa8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 BACH2Q9BYV9 841 aa8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 NOL8Q76FK4 1167 aaKnown RBP8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 SYTL4Q96C24 671 aaPredicted RBP8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 TSPOAP1O95153 1857 aa8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 TRIM27P14373 513 aa8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 STRN4Q9NRL3 753 aa8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 HSPA2P54652 639 aa8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 C9orf78Q9NZ63 289 aaPredicted RBP8.88□□□□□ -0.99
TGFBR3-202ENST00000370399 POLR3AO14802 1390 aaPredicted RBP8.87□□□□□ -0.99
TGFBR3-202ENST00000370399 IGHDP01880 384 aa8.87□□□□□ -0.99
TGFBR3-202ENST00000370399 HDGFL1Q5TGJ6 251 aa8.87□□□□□ -0.99
TGFBR3-202ENST00000370399 TTC5Q8N0Z6 440 aa8.87□□□□□ -0.99
TGFBR3-202ENST00000370399 KDM5DQ9BY66 1539 aa8.87□□□□□ -0.99
TGFBR3-202ENST00000370399 NSD2O96028 1365 aa8.87□□□□□ -0.99
TGFBR3-202ENST00000370399 KRT24Q2M2I5 525 aa8.87□□□□□ -0.99
TGFBR3-202ENST00000370399 RLBP1P12271 317 aa8.86□□□□□ -0.99
TGFBR3-202ENST00000370399 GZF1Q9H116 711 aaPredicted RBP8.86□□□□□ -0.99
TGFBR3-202ENST00000370399 PIK3C2GO75747 1445 aa8.86□□□□□ -0.99
TGFBR3-202ENST00000370399 F6X3S4 739 aa8.86□□□□□ -0.99
TGFBR3-202ENST00000370399 NPHP1O15259 732 aa8.86□□□□□ -0.99
TGFBR3-202ENST00000370399 DEKP35659 375 aaKnown RBP8.86□□□□□ -0.99
TGFBR3-202ENST00000370399 EIF4A2Q14240 407 aaKnown RBP8.86□□□□□ -0.99
TGFBR3-202ENST00000370399 MBIPQ9NS73 344 aa8.86□□□□□ -0.99
TGFBR3-202ENST00000370399 TRPM2O94759 1503 aa8.86□□□□□ -0.99
TGFBR3-202ENST00000370399 METP08581 1390 aa8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 PLEKHO1Q53GL0 409 aaPredicted RBP8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 TSPYL6Q8N831 410 aa8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 PUS7Q96PZ0 661 aaKnown RBP8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 BCORL1Q5H9F3 1711 aa8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 CHMP4AQ9BY43 222 aa8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 NINLQ9Y2I6 1382 aa8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 ERVK-7P63135 1459 aa8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 CCDC30Q5VVM6 783 aa8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 MPRIPQ6WCQ1 1025 aa8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 PCDHB15Q9Y5E8 787 aa8.85□□□□□ -0.99
TGFBR3-202ENST00000370399 CT47B1P0C2W7 299 aaPredicted RBP8.84□□□□□ -0.99
TGFBR3-202ENST00000370399 MSH5O43196 834 aa8.84□□□□□ -0.99
TGFBR3-202ENST00000370399 DDX54Q8TDD1 881 aaKnown RBP8.84□□□□□ -0.99
TGFBR3-202ENST00000370399 NAP1L2Q9ULW6 460 aaPredicted RBP8.84□□□□□ -0.99
TGFBR3-202ENST00000370399 GNAT3A8MTJ3 354 aa8.84□□□□□ -0.99
TGFBR3-202ENST00000370399 FGD1P98174 961 aa8.84□□□□□ -0.99
TGFBR3-202ENST00000370399 PRDM11Q9NQV5 511 aa8.84□□□□□ -0.99
TGFBR3-202ENST00000370399 GOLGA6L22H0YM25 854 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 KIAA1211Q6ZU35 1233 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 C8orf58Q8NAV2 365 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 TBX22Q9Y458 520 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 CHRNA2Q15822 529 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 CFAP44Q96MT7 982 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 IFT57Q9NWB7 429 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 PLXNC1O60486 1568 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 UBTFL1P0CB47 393 aaPredicted RBP8.83□□□□□ -1
TGFBR3-202ENST00000370399 KRT28Q7Z3Y7 464 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 NPC1L1Q9UHC9 1359 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 TMEM2Q9UHN6 1383 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 TOM1L2Q6ZVM7 507 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 CABLES1Q8TDN4 633 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 MAP3K19Q56UN5 1328 aa8.83□□□□□ -1
TGFBR3-202ENST00000370399 ANXA1P04083 346 aa8.82□□□□□ -1
TGFBR3-202ENST00000370399 RIC3Q7Z5B4 369 aa8.82□□□□□ -1
TGFBR3-202ENST00000370399 ANP32BQ92688 251 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms