RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 NPATQ14207 1427 aa22.21■■□□□ 1.15
CHUK-201ENST00000370397 TSR2Q969E8 191 aaKnown RBP22.2■■□□□ 1.14
CHUK-201ENST00000370397 ZBTB40Q9NUA8 1239 aa22.19■■□□□ 1.14
CHUK-201ENST00000370397 CDC42BPGQ6DT37 1551 aa22.19■■□□□ 1.14
CHUK-201ENST00000370397 SNX21Q969T3 373 aa22.19■■□□□ 1.14
CHUK-201ENST00000370397 CLTCQ00610 1675 aaKnown RBP22.19■■□□□ 1.14
CHUK-201ENST00000370397 NEXMIFQ5QGS0 1516 aa22.19■■□□□ 1.14
CHUK-201ENST00000370397 SSH1Q8WYL5 1049 aa22.19■■□□□ 1.14
CHUK-201ENST00000370397 PUS7Q96PZ0 661 aaKnown RBP22.19■■□□□ 1.14
CHUK-201ENST00000370397 MFAP1P55081 439 aaKnown RBP22.18■■□□□ 1.14
CHUK-201ENST00000370397 GZF1Q9H116 711 aaPredicted RBP22.18■■□□□ 1.14
CHUK-201ENST00000370397 MRE11P49959 708 aa22.17■■□□□ 1.14
CHUK-201ENST00000370397 TRAK1Q9UPV9 953 aa22.17■■□□□ 1.14
CHUK-201ENST00000370397 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
CHUK-201ENST00000370397 CD163L1Q9NR16 1453 aa22.16■■□□□ 1.14
CHUK-201ENST00000370397 ABCC11Q96J66 1382 aa22.16■■□□□ 1.14
CHUK-201ENST00000370397 EXOSC9Q06265 439 aaKnown RBP22.16■■□□□ 1.14
CHUK-201ENST00000370397 ATF7IPQ6VMQ6 1270 aa22.16■■□□□ 1.14
CHUK-201ENST00000370397 ARHGAP31Q2M1Z3 1444 aa22.15■■□□□ 1.14
CHUK-201ENST00000370397 NUCB1Q02818 461 aa22.15■■□□□ 1.14
CHUK-201ENST00000370397 GRPEL1Q9HAV7 217 aa22.15■■□□□ 1.14
CHUK-201ENST00000370397 GAS2L3Q86XJ1 694 aa22.14■■□□□ 1.14
CHUK-201ENST00000370397 DDX19BQ9UMR2 479 aa22.13■■□□□ 1.13
CHUK-201ENST00000370397 IL16Q14005 1332 aa22.12■■□□□ 1.13
CHUK-201ENST00000370397 TMEM57Q8N5G2 664 aa22.12■■□□□ 1.13
CHUK-201ENST00000370397 ISY1Q9ULR0 285 aaKnown RBP22.12■■□□□ 1.13
CHUK-201ENST00000370397 TMPOP42166 694 aaKnown RBP22.12■■□□□ 1.13
CHUK-201ENST00000370397 TNPO1Q92973 898 aaKnown RBP22.12■■□□□ 1.13
CHUK-201ENST00000370397 KNDC1Q76NI1 1749 aa22.12■■□□□ 1.13
CHUK-201ENST00000370397 KIF20BQ96Q89 1820 aa22.12■■□□□ 1.13
CHUK-201ENST00000370397 DDX11L8A8MPP1 907 aa22.11■■□□□ 1.13
CHUK-201ENST00000370397 RAB3GAP1Q15042 981 aa22.11■■□□□ 1.13
CHUK-201ENST00000370397 TMEM132EQ6IEE7 984 aa22.11■■□□□ 1.13
CHUK-201ENST00000370397 FTSJ3Q8IY81 847 aaKnown RBP22.11■■□□□ 1.13
CHUK-201ENST00000370397 CD2BP2O95400 341 aaKnown RBP22.11■■□□□ 1.13
CHUK-201ENST00000370397 NOB1Q9ULX3 412 aaKnown RBP22.11■■□□□ 1.13
CHUK-201ENST00000370397 A0A1W2PP64 1363 aa22.11■■□□□ 1.13
CHUK-201ENST00000370397 SMC4Q9NTJ3 1288 aa22.11■■□□□ 1.13
CHUK-201ENST00000370397 CFAP53Q96M91 514 aa22.1■■□□□ 1.13
CHUK-201ENST00000370397 ARXQ96QS3 562 aa22.1■■□□□ 1.13
CHUK-201ENST00000370397 PPIP5K1Q6PFW1 1433 aa22.1■■□□□ 1.13
CHUK-201ENST00000370397 PNPLA6Q8IY17 1366 aa22.1■■□□□ 1.13
CHUK-201ENST00000370397 U2AF1L5P0DN76 240 aaPredicted RBP22.1■■□□□ 1.13
CHUK-201ENST00000370397 U2AF1Q01081 240 aaKnown RBP eCLIP22.1■■□□□ 1.13
CHUK-201ENST00000370397 ABCC3O15438 1527 aa22.09■■□□□ 1.13
CHUK-201ENST00000370397 LRRC7Q96NW7 1537 aa22.09■■□□□ 1.13
CHUK-201ENST00000370397 REREQ9P2R6 1566 aa22.09■■□□□ 1.13
CHUK-201ENST00000370397 PIK3R4Q99570 1358 aa22.08■■□□□ 1.13
CHUK-201ENST00000370397 DIP2BQ9P265 1576 aa22.08■■□□□ 1.12
CHUK-201ENST00000370397 AK9Q5TCS8 1911 aa22.08■■□□□ 1.12
CHUK-201ENST00000370397 MYO5BQ9ULV0 1848 aa22.08■■□□□ 1.12
CHUK-201ENST00000370397 BRPF1P55201 1214 aaPredicted RBP22.07■■□□□ 1.12
CHUK-201ENST00000370397 ITPRIPQ8IWB1 547 aa22.07■■□□□ 1.12
CHUK-201ENST00000370397 HSCBQ8IWL3 235 aa22.07■■□□□ 1.12
CHUK-201ENST00000370397 CIZ1Q9ULV3 898 aaPredicted RBP22.07■■□□□ 1.12
CHUK-201ENST00000370397 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
CHUK-201ENST00000370397 CLEC17AQ6ZS10 378 aa22.06■■□□□ 1.12
CHUK-201ENST00000370397 BMP2KLQ5H9B9 411 aa22.05■■□□□ 1.12
CHUK-201ENST00000370397 PTPRMP28827 1452 aa22.05■■□□□ 1.12
CHUK-201ENST00000370397 ESPNB1AK53 854 aa22.04■■□□□ 1.12
CHUK-201ENST00000370397 RPGRIP1LQ68CZ1 1315 aa22.04■■□□□ 1.12
CHUK-201ENST00000370397 PTCH1Q13635 1447 aa22.04■■□□□ 1.12
CHUK-201ENST00000370397 CHD1LQ86WJ1 897 aa22.03■■□□□ 1.12
CHUK-201ENST00000370397 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
CHUK-201ENST00000370397 DLG5Q8TDM6 1919 aa22.02■■□□□ 1.12
CHUK-201ENST00000370397 EVC2Q86UK5 1308 aa22.02■■□□□ 1.11
CHUK-201ENST00000370397 YEATS2Q9ULM3 1422 aa22.01■■□□□ 1.11
CHUK-201ENST00000370397 ALDH1L2Q3SY69 923 aa22.01■■□□□ 1.11
CHUK-201ENST00000370397 FAM135BQ49AJ0 1406 aa22.01■■□□□ 1.11
CHUK-201ENST00000370397 KIF16BQ96L93 1317 aa22■■□□□ 1.11
CHUK-201ENST00000370397 LNPKQ9C0E8 428 aa22■■□□□ 1.11
CHUK-201ENST00000370397 IBTKQ9P2D0 1353 aaPredicted RBP22■■□□□ 1.11
CHUK-201ENST00000370397 KIF13AQ9H1H9 1805 aa21.99■■□□□ 1.11
CHUK-201ENST00000370397 ZBTB7BO15156 539 aaPredicted RBP21.99■■□□□ 1.11
CHUK-201ENST00000370397 SIRT2Q8IXJ6 389 aa21.99■■□□□ 1.11
CHUK-201ENST00000370397 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
CHUK-201ENST00000370397 MLH3Q9UHC1 1453 aa21.98■■□□□ 1.11
CHUK-201ENST00000370397 NAP1L5Q96NT1 182 aaPredicted RBP21.98■■□□□ 1.11
CHUK-201ENST00000370397 ZFYVE9O95405 1425 aa21.97■■□□□ 1.11
CHUK-201ENST00000370397 FYB1O15117 783 aa21.97■■□□□ 1.11
CHUK-201ENST00000370397 PPP1R9BQ96SB3 815 aa21.97■■□□□ 1.11
CHUK-201ENST00000370397 MAP2P11137 1827 aaKnown RBP21.96■■□□□ 1.11
CHUK-201ENST00000370397 RRP9O43818 475 aaKnown RBP21.96■■□□□ 1.11
CHUK-201ENST00000370397 TBC1D9Q6ZT07 1266 aa21.95■■□□□ 1.11
CHUK-201ENST00000370397 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.1
CHUK-201ENST00000370397 RBM42Q9BTD8 480 aaKnown RBP21.95■■□□□ 1.1
CHUK-201ENST00000370397 GAS2L2Q8NHY3 880 aa21.94■■□□□ 1.1
CHUK-201ENST00000370397 RIPK4P57078 832 aa21.94■■□□□ 1.1
CHUK-201ENST00000370397 TMEM131LA2VDJ0 1609 aa21.94■■□□□ 1.1
CHUK-201ENST00000370397 GGNBP2Q9H3C7 697 aa21.93■■□□□ 1.1
CHUK-201ENST00000370397 TUBGCP6Q96RT7 1819 aa21.93■■□□□ 1.1
CHUK-201ENST00000370397 K7ELQ4 463 aaPredicted RBP21.93■■□□□ 1.1
CHUK-201ENST00000370397 SKOR2Q2VWA4 1001 aaPredicted RBP21.92■■□□□ 1.1
CHUK-201ENST00000370397 ABCC4O15439 1325 aa21.92■■□□□ 1.1
CHUK-201ENST00000370397 NEO1Q92859 1461 aa21.92■■□□□ 1.1
CHUK-201ENST00000370397 CYP2E1P05181 493 aaPredicted RBP21.91■■□□□ 1.1
CHUK-201ENST00000370397 GBP4Q96PP9 640 aa21.91■■□□□ 1.1
CHUK-201ENST00000370397 SSFA2P28290 1259 aa21.91■■□□□ 1.1
CHUK-201ENST00000370397 U2SURPO15042 1029 aaKnown RBP21.91■■□□□ 1.1
CHUK-201ENST00000370397 MRPL50Q8N5N7 158 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms