RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 RGS12O14924 1447 aa9.94□□□□□ -0.82
CSDE1-204ENST00000369530 SLAIN2Q9P270 581 aa9.93□□□□□ -0.82
CSDE1-204ENST00000369530 PLEKHG3A1L390 1219 aa9.93□□□□□ -0.82
CSDE1-204ENST00000369530 COL3A1P02461 1466 aaPredicted RBP9.93□□□□□ -0.82
CSDE1-204ENST00000369530 SPATA31A6Q5VVP1 1343 aa9.93□□□□□ -0.82
CSDE1-204ENST00000369530 ONECUT3O60422 494 aaPredicted RBP9.92□□□□□ -0.82
CSDE1-204ENST00000369530 CFAP70Q5T0N1 1121 aa9.91□□□□□ -0.82
CSDE1-204ENST00000369530 ESF1Q9H501 851 aaKnown RBP9.91□□□□□ -0.82
CSDE1-204ENST00000369530 KIF13BQ9NQT8 1826 aa9.91□□□□□ -0.82
CSDE1-204ENST00000369530 FNBP4Q8N3X1 1017 aaPredicted RBP9.91□□□□□ -0.82
CSDE1-204ENST00000369530 SCN11AQ9UI33 1791 aa9.9□□□□□ -0.82
CSDE1-204ENST00000369530 SPATA31A3Q5VYP0 1347 aa9.9□□□□□ -0.82
CSDE1-204ENST00000369530 ILDR2Q71H61 639 aa9.9□□□□□ -0.83
CSDE1-204ENST00000369530 TIMELESSQ9UNS1 1208 aa9.9□□□□□ -0.83
CSDE1-204ENST00000369530 PLEKHG2Q9H7P9 1386 aa9.89□□□□□ -0.83
CSDE1-204ENST00000369530 SLC24A1O60721 1099 aa9.89□□□□□ -0.83
CSDE1-204ENST00000369530 DIEXFQ68CQ4 756 aaKnown RBP9.89□□□□□ -0.83
CSDE1-204ENST00000369530 HDGFP51858 240 aaKnown RBP9.89□□□□□ -0.83
CSDE1-204ENST00000369530 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
CSDE1-204ENST00000369530 L3MBTL2Q969R5 705 aa9.88□□□□□ -0.83
CSDE1-204ENST00000369530 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
CSDE1-204ENST00000369530 COL5A2P05997 1499 aaPredicted RBP9.88□□□□□ -0.83
CSDE1-204ENST00000369530 DOT1LQ8TEK3 1739 aa9.87□□□□□ -0.83
CSDE1-204ENST00000369530 BTAF1O14981 1849 aa9.87□□□□□ -0.83
CSDE1-204ENST00000369530 TJP1Q07157 1748 aa9.86□□□□□ -0.83
CSDE1-204ENST00000369530 CADPS2Q86UW7 1296 aa9.85□□□□□ -0.83
CSDE1-204ENST00000369530 DISP3Q9P2K9 1392 aa9.85□□□□□ -0.83
CSDE1-204ENST00000369530 WAPLQ7Z5K2 1190 aa9.85□□□□□ -0.83
CSDE1-204ENST00000369530 EIF3AQ14152 1382 aaKnown RBP9.85□□□□□ -0.83
CSDE1-204ENST00000369530 NINLQ9Y2I6 1382 aa9.84□□□□□ -0.83
CSDE1-204ENST00000369530 TOM1O60784 492 aa9.84□□□□□ -0.83
CSDE1-204ENST00000369530 C5P01031 1676 aa9.84□□□□□ -0.83
CSDE1-204ENST00000369530 UBE2Q2Q8WVN8 375 aa9.84□□□□□ -0.83
CSDE1-204ENST00000369530 BRCA1P38398 1863 aaKnown RBP9.83□□□□□ -0.84
CSDE1-204ENST00000369530 WASLO00401 505 aaPredicted RBP9.83□□□□□ -0.84
CSDE1-204ENST00000369530 DLG5Q8TDM6 1919 aa9.83□□□□□ -0.84
CSDE1-204ENST00000369530 MRC1P22897 1456 aa9.82□□□□□ -0.84
CSDE1-204ENST00000369530 PPIP5K1Q6PFW1 1433 aa9.82□□□□□ -0.84
CSDE1-204ENST00000369530 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
CSDE1-204ENST00000369530 NUTM2DQ5VT03 806 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-204ENST00000369530 TMEM132EQ6IEE7 984 aa9.82□□□□□ -0.84
CSDE1-204ENST00000369530 ORAI2Q96SN7 254 aa9.82□□□□□ -0.84
CSDE1-204ENST00000369530 CCER1Q8TC90 406 aaPredicted RBP9.81□□□□□ -0.84
CSDE1-204ENST00000369530 MYT1LQ9UL68 1186 aa9.81□□□□□ -0.84
CSDE1-204ENST00000369530 KDM3BQ7LBC6 1761 aa9.81□□□□□ -0.84
CSDE1-204ENST00000369530 UBR3Q6ZT12 1888 aa9.81□□□□□ -0.84
CSDE1-204ENST00000369530 EDC4Q6P2E9 1401 aaKnown RBP9.81□□□□□ -0.84
CSDE1-204ENST00000369530 SIN3AQ96ST3 1273 aa9.81□□□□□ -0.84
CSDE1-204ENST00000369530 INSRP06213 1382 aa9.81□□□□□ -0.84
CSDE1-204ENST00000369530 PPP1R15AO75807 674 aaPredicted RBP9.8□□□□□ -0.84
CSDE1-204ENST00000369530 C4AP0C0L4 1744 aa9.8□□□□□ -0.84
CSDE1-204ENST00000369530 C4BP0C0L5 1744 aa9.8□□□□□ -0.84
CSDE1-204ENST00000369530 DLEC1Q9Y238 1755 aa9.79□□□□□ -0.84
CSDE1-204ENST00000369530 AATKQ6ZMQ8 1374 aa9.79□□□□□ -0.84
CSDE1-204ENST00000369530 PROSER2Q86WR7 435 aaPredicted RBP9.79□□□□□ -0.84
CSDE1-204ENST00000369530 ITGAEP38570 1179 aa9.78□□□□□ -0.84
CSDE1-204ENST00000369530 DAXXQ9UER7 740 aaPredicted RBP9.78□□□□□ -0.84
CSDE1-204ENST00000369530 BCORQ6W2J9 1755 aa9.78□□□□□ -0.84
CSDE1-204ENST00000369530 POTEAQ6S8J7 498 aa9.78□□□□□ -0.84
CSDE1-204ENST00000369530 PRAM1Q96QH2 718 aa9.78□□□□□ -0.84
CSDE1-204ENST00000369530 UBAP1LF5GYI3 381 aa9.78□□□□□ -0.84
CSDE1-204ENST00000369530 RBM33Q96EV2 1170 aaKnown RBP9.78□□□□□ -0.84
CSDE1-204ENST00000369530 ARHGEF10O15013 1369 aa9.77□□□□□ -0.84
CSDE1-204ENST00000369530 A0A1W2PP64 1363 aa9.77□□□□□ -0.85
CSDE1-204ENST00000369530 ERICH6BQ5W0A0 696 aa9.77□□□□□ -0.85
CSDE1-204ENST00000369530 SUPT16HQ9Y5B9 1047 aaKnown RBP9.76□□□□□ -0.85
CSDE1-204ENST00000369530 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
CSDE1-204ENST00000369530 LAMB4A4D0S4 1761 aa9.76□□□□□ -0.85
CSDE1-204ENST00000369530 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
CSDE1-204ENST00000369530 NSD2O96028 1365 aa9.75□□□□□ -0.85
CSDE1-204ENST00000369530 DCAF11Q8TEB1 546 aa9.74□□□□□ -0.85
CSDE1-204ENST00000369530 N4BP2Q86UW6 1770 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-204ENST00000369530 ARFGEF2Q9Y6D5 1785 aa9.74□□□□□ -0.85
CSDE1-204ENST00000369530 ZNF646O15015 1829 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-204ENST00000369530 ATAD2Q6PL18 1390 aa9.74□□□□□ -0.85
CSDE1-204ENST00000369530 DDX17Q92841 729 aaKnown RBP9.74□□□□□ -0.85
CSDE1-204ENST00000369530 KIF24Q5T7B8 1368 aa9.74□□□□□ -0.85
CSDE1-204ENST00000369530 NPHP3Q7Z494 1330 aa9.72□□□□□ -0.85
CSDE1-204ENST00000369530 BLMP54132 1417 aaPredicted RBP9.72□□□□□ -0.85
CSDE1-204ENST00000369530 TRIM52Q96A61 297 aa9.72□□□□□ -0.85
CSDE1-204ENST00000369530 CENPJQ9HC77 1338 aaPredicted RBP9.71□□□□□ -0.85
CSDE1-204ENST00000369530 RTL1A6NKG5 1358 aa9.71□□□□□ -0.86
CSDE1-204ENST00000369530 USP47Q96K76 1375 aa9.7□□□□□ -0.86
CSDE1-204ENST00000369530 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
CSDE1-204ENST00000369530 PER1O15534 1290 aaPredicted RBP9.7□□□□□ -0.86
CSDE1-204ENST00000369530 ROCK2O75116 1388 aaKnown RBP9.7□□□□□ -0.86
CSDE1-204ENST00000369530 PLPPR3Q6T4P5 718 aa9.69□□□□□ -0.86
CSDE1-204ENST00000369530 CDK19Q9BWU1 502 aa9.69□□□□□ -0.86
CSDE1-204ENST00000369530 LRRC59Q96AG4 307 aaKnown RBP9.69□□□□□ -0.86
CSDE1-204ENST00000369530 NUDT16Q96DE0 195 aaKnown RBP9.69□□□□□ -0.86
CSDE1-204ENST00000369530 CARD14Q9BXL6 1004 aa9.69□□□□□ -0.86
CSDE1-204ENST00000369530 TNS2Q63HR2 1409 aa9.68□□□□□ -0.86
CSDE1-204ENST00000369530 SCN7AQ01118 1682 aa9.68□□□□□ -0.86
CSDE1-204ENST00000369530 ACEP12821 1306 aa9.68□□□□□ -0.86
CSDE1-204ENST00000369530 ZNF316A6NFI3 1004 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-204ENST00000369530 SPATA31A5Q5VU36 1347 aa9.68□□□□□ -0.86
CSDE1-204ENST00000369530 SPATA31A7Q8IWB4 1347 aa9.68□□□□□ -0.86
CSDE1-204ENST00000369530 TTC21AQ8NDW8 1320 aa9.67□□□□□ -0.86
CSDE1-204ENST00000369530 SOCS7O14512 581 aa9.67□□□□□ -0.86
CSDE1-204ENST00000369530 PHF8Q9UPP1 1060 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms