RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PAK3O75914 559 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-204ENST00000369462 RALBP1Q15311 655 aa14.88□□□□□ -0.03
BRCC3-204ENST00000369462 NME9Q86XW9 330 aa14.88□□□□□ -0.03
BRCC3-204ENST00000369462 DDX17Q92841 729 aaKnown RBP14.88□□□□□ -0.03
BRCC3-204ENST00000369462 MON2Q7Z3U7 1717 aa14.88□□□□□ -0.03
BRCC3-204ENST00000369462 MORC1Q86VD1 984 aa14.87□□□□□ -0.03
BRCC3-204ENST00000369462 PARD3Q8TEW0 1356 aa14.87□□□□□ -0.03
BRCC3-204ENST00000369462 SSH2Q76I76 1423 aa14.87□□□□□ -0.03
BRCC3-204ENST00000369462 KRT28Q7Z3Y7 464 aa14.87□□□□□ -0.03
BRCC3-204ENST00000369462 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
BRCC3-204ENST00000369462 TNNT2P45379 298 aaPredicted RBP14.86□□□□□ -0.03
BRCC3-204ENST00000369462 NPHP3Q7Z494 1330 aa14.86□□□□□ -0.03
BRCC3-204ENST00000369462 NSD2O96028 1365 aa14.86□□□□□ -0.03
BRCC3-204ENST00000369462 CERKQ8TCT0 537 aa14.85□□□□□ -0.03
BRCC3-204ENST00000369462 TTC21AQ8NDW8 1320 aa14.85□□□□□ -0.03
BRCC3-204ENST00000369462 KIF1AQ12756 1690 aa14.85□□□□□ -0.03
BRCC3-204ENST00000369462 TOM1O60784 492 aa14.85□□□□□ -0.03
BRCC3-204ENST00000369462 ABTB2Q8N961 1025 aa14.84□□□□□ -0.03
BRCC3-204ENST00000369462 NRKQ7Z2Y5 1582 aa14.84□□□□□ -0.03
BRCC3-204ENST00000369462 MYBBP1AQ9BQG0 1328 aaKnown RBP14.84□□□□□ -0.03
BRCC3-204ENST00000369462 NUTM2GQ5VZR2 741 aa14.84□□□□□ -0.03
BRCC3-204ENST00000369462 COG3Q96JB2 828 aa14.84□□□□□ -0.03
BRCC3-204ENST00000369462 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.04
BRCC3-204ENST00000369462 UBAP1LF5GYI3 381 aa14.83□□□□□ -0.04
BRCC3-204ENST00000369462 LMOD2Q6P5Q4 547 aa14.83□□□□□ -0.04
BRCC3-204ENST00000369462 NLRP6P59044 892 aa14.83□□□□□ -0.04
BRCC3-204ENST00000369462 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
BRCC3-204ENST00000369462 PPP2R1AP30153 589 aa14.81□□□□□ -0.04
BRCC3-204ENST00000369462 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
BRCC3-204ENST00000369462 CCER2I3L3R5 266 aa14.81□□□□□ -0.04
BRCC3-204ENST00000369462 KIF20BQ96Q89 1820 aa14.81□□□□□ -0.04
BRCC3-204ENST00000369462 CCDC184Q52MB2 194 aa14.8□□□□□ -0.04
BRCC3-204ENST00000369462 NLRP13Q86W25 1043 aa14.8□□□□□ -0.04
BRCC3-204ENST00000369462 FBLN1P23142 703 aa14.8□□□□□ -0.04
BRCC3-204ENST00000369462 IQSEC2Q5JU85 1478 aa14.79□□□□□ -0.04
BRCC3-204ENST00000369462 PXDNQ92626 1479 aa14.79□□□□□ -0.04
BRCC3-204ENST00000369462 SOX12O15370 315 aa14.79□□□□□ -0.04
BRCC3-204ENST00000369462 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
BRCC3-204ENST00000369462 MRS2Q9HD23 443 aa14.79□□□□□ -0.04
BRCC3-204ENST00000369462 OVOS2A0A0J9YW53 1432 aa14.78□□□□□ -0.04
BRCC3-204ENST00000369462 OVOS2Q6IE36 1432 aa14.78□□□□□ -0.04
BRCC3-204ENST00000369462 SOS2Q07890 1332 aaPredicted RBP14.78□□□□□ -0.04
BRCC3-204ENST00000369462 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
BRCC3-204ENST00000369462 PIK3C2AO00443 1686 aa14.78□□□□□ -0.04
BRCC3-204ENST00000369462 ROBO1Q9Y6N7 1651 aa14.78□□□□□ -0.04
BRCC3-204ENST00000369462 SBNO1A3KN83 1393 aa14.78□□□□□ -0.04
BRCC3-204ENST00000369462 SPATA31A3Q5VYP0 1347 aa14.77□□□□□ -0.05
BRCC3-204ENST00000369462 TRPM3Q9HCF6 1732 aaPredicted RBP14.76□□□□□ -0.05
BRCC3-204ENST00000369462 ANKRD26Q9UPS8 1709 aa14.76□□□□□ -0.05
BRCC3-204ENST00000369462 MTHFSP49914 203 aa14.76□□□□□ -0.05
BRCC3-204ENST00000369462 TNS3Q68CZ2 1445 aa14.75□□□□□ -0.05
BRCC3-204ENST00000369462 PPM1GO15355 546 aaPredicted RBP14.74□□□□□ -0.05
BRCC3-204ENST00000369462 RRS1Q15050 365 aaKnown RBP14.74□□□□□ -0.05
BRCC3-204ENST00000369462 POLKQ9UBT6 870 aa14.74□□□□□ -0.05
BRCC3-204ENST00000369462 NHSL1Q5SYE7 1610 aa14.74□□□□□ -0.05
BRCC3-204ENST00000369462 EMILIN1Q9Y6C2 1016 aa14.73□□□□□ -0.05
BRCC3-204ENST00000369462 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
BRCC3-204ENST00000369462 AATKQ6ZMQ8 1374 aa14.73□□□□□ -0.05
BRCC3-204ENST00000369462 ALS2Q96Q42 1657 aa14.72□□□□□ -0.05
BRCC3-204ENST00000369462 GCP02774 474 aa14.72□□□□□ -0.05
BRCC3-204ENST00000369462 CABLES1Q8TDN4 633 aa14.72□□□□□ -0.05
BRCC3-204ENST00000369462 LRRC59Q96AG4 307 aaKnown RBP14.72□□□□□ -0.05
BRCC3-204ENST00000369462 KCNH5Q8NCM2 988 aa14.71□□□□□ -0.05
BRCC3-204ENST00000369462 AHDC1Q5TGY3 1603 aaPredicted RBP14.71□□□□□ -0.06
BRCC3-204ENST00000369462 USP19O94966 1318 aa14.71□□□□□ -0.06
BRCC3-204ENST00000369462 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
BRCC3-204ENST00000369462 MARF1Q9Y4F3 1742 aaKnown RBP14.7□□□□□ -0.06
BRCC3-204ENST00000369462 MAP3K19Q56UN5 1328 aa14.7□□□□□ -0.06
BRCC3-204ENST00000369462 CFAP53Q96M91 514 aa14.7□□□□□ -0.06
BRCC3-204ENST00000369462 MAP2P11137 1827 aaKnown RBP14.69□□□□□ -0.06
BRCC3-204ENST00000369462 USP54Q70EL1 1684 aa14.69□□□□□ -0.06
BRCC3-204ENST00000369462 PNISRQ8TF01 805 aaKnown RBP14.69□□□□□ -0.06
BRCC3-204ENST00000369462 ZBTB7CA1YPR0 619 aa14.68□□□□□ -0.06
BRCC3-204ENST00000369462 MED1Q15648 1581 aaPredicted RBP14.67□□□□□ -0.06
BRCC3-204ENST00000369462 AMPHP49418 695 aa14.67□□□□□ -0.06
BRCC3-204ENST00000369462 ZC3H6P61129 1189 aaKnown RBP14.67□□□□□ -0.06
BRCC3-204ENST00000369462 PHLPP1O60346 1717 aa14.66□□□□□ -0.06
BRCC3-204ENST00000369462 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
BRCC3-204ENST00000369462 SLIT3O75094 1523 aa14.66□□□□□ -0.06
BRCC3-204ENST00000369462 PNPLA6Q8IY17 1366 aa14.66□□□□□ -0.06
BRCC3-204ENST00000369462 NFAT5O94916 1531 aa14.66□□□□□ -0.06
BRCC3-204ENST00000369462 HSP90AB2PQ58FF8 381 aa14.65□□□□□ -0.06
BRCC3-204ENST00000369462 SMG6Q86US8 1419 aaKnown RBP14.65□□□□□ -0.06
BRCC3-204ENST00000369462 ARHGEF25Q86VW2 580 aa14.65□□□□□ -0.06
BRCC3-204ENST00000369462 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
BRCC3-204ENST00000369462 COL16A1Q07092 1604 aaPredicted RBP14.64□□□□□ -0.07
BRCC3-204ENST00000369462 DIAPH1O60610 1272 aaKnown RBP14.64□□□□□ -0.07
BRCC3-204ENST00000369462 FLT4P35916 1363 aa14.64□□□□□ -0.07
BRCC3-204ENST00000369462 CDK12Q9NYV4 1490 aaPredicted RBP14.64□□□□□ -0.07
BRCC3-204ENST00000369462 HOXC9P31274 260 aa14.63□□□□□ -0.07
BRCC3-204ENST00000369462 YTHDC1Q96MU7 727 aaKnown RBP14.63□□□□□ -0.07
BRCC3-204ENST00000369462 INSRP06213 1382 aa14.63□□□□□ -0.07
BRCC3-204ENST00000369462 ADAMTS8Q9UP79 889 aa14.63□□□□□ -0.07
BRCC3-204ENST00000369462 NUDCQ9Y266 331 aa14.62□□□□□ -0.07
BRCC3-204ENST00000369462 U2SURPO15042 1029 aaKnown RBP14.62□□□□□ -0.07
BRCC3-204ENST00000369462 IP6K1Q92551 441 aa14.62□□□□□ -0.07
BRCC3-204ENST00000369462 COL3A1P02461 1466 aaPredicted RBP14.62□□□□□ -0.07
BRCC3-204ENST00000369462 PEAK1Q9H792 1746 aa14.62□□□□□ -0.07
BRCC3-204ENST00000369462 PHRF1Q9P1Y6 1649 aaKnown RBP14.61□□□□□ -0.07
BRCC3-204ENST00000369462 KIF24Q5T7B8 1368 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms