RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 COL3A1P02461 1466 aaPredicted RBP18.92■□□□□ 0.62
HMGCS2-201ENST00000369406 USP6P35125 1406 aa18.92■□□□□ 0.62
HMGCS2-201ENST00000369406 SSH2Q76I76 1423 aa18.91■□□□□ 0.62
HMGCS2-201ENST00000369406 XIRP1Q702N8 1843 aaKnown RBP18.91■□□□□ 0.62
HMGCS2-201ENST00000369406 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
HMGCS2-201ENST00000369406 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
HMGCS2-201ENST00000369406 SALL2Q9Y467 1007 aaPredicted RBP18.9■□□□□ 0.62
HMGCS2-201ENST00000369406 PIK3C2AO00443 1686 aa18.89■□□□□ 0.62
HMGCS2-201ENST00000369406 INSRP06213 1382 aa18.88■□□□□ 0.61
HMGCS2-201ENST00000369406 TTC21BQ7Z4L5 1316 aa18.88■□□□□ 0.61
HMGCS2-201ENST00000369406 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.61
HMGCS2-201ENST00000369406 CCDC146Q8IYE0 955 aa18.88■□□□□ 0.61
HMGCS2-201ENST00000369406 ZNF692Q9BU19 519 aaPredicted RBP18.86■□□□□ 0.61
HMGCS2-201ENST00000369406 OVOS2A0A0J9YW53 1432 aa18.85■□□□□ 0.61
HMGCS2-201ENST00000369406 OVOS2Q6IE36 1432 aa18.85■□□□□ 0.61
HMGCS2-201ENST00000369406 PROSER2Q86WR7 435 aaPredicted RBP18.84■□□□□ 0.61
HMGCS2-201ENST00000369406 PEAK1Q9H792 1746 aa18.83■□□□□ 0.6
HMGCS2-201ENST00000369406 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
HMGCS2-201ENST00000369406 NGDNQ8NEJ9 315 aaKnown RBP18.82■□□□□ 0.6
HMGCS2-201ENST00000369406 EMILIN1Q9Y6C2 1016 aa18.82■□□□□ 0.6
HMGCS2-201ENST00000369406 C14orf37Q86TY3 774 aa18.82■□□□□ 0.6
HMGCS2-201ENST00000369406 TMEM94Q12767 1356 aa18.81■□□□□ 0.6
HMGCS2-201ENST00000369406 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
HMGCS2-201ENST00000369406 SMG6Q86US8 1419 aaKnown RBP18.8■□□□□ 0.6
HMGCS2-201ENST00000369406 RRS1Q15050 365 aaKnown RBP18.8■□□□□ 0.6
HMGCS2-201ENST00000369406 COG3Q96JB2 828 aa18.79■□□□□ 0.6
HMGCS2-201ENST00000369406 ORAI2Q96SN7 254 aa18.79■□□□□ 0.6
HMGCS2-201ENST00000369406 USP54Q70EL1 1684 aa18.79■□□□□ 0.6
HMGCS2-201ENST00000369406 CDCA7LQ96GN5 454 aa18.79■□□□□ 0.6
HMGCS2-201ENST00000369406 PHF8Q9UPP1 1060 aa18.79■□□□□ 0.6
HMGCS2-201ENST00000369406 IQSEC2Q5JU85 1478 aa18.78■□□□□ 0.6
HMGCS2-201ENST00000369406 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
HMGCS2-201ENST00000369406 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
HMGCS2-201ENST00000369406 CFAP53Q96M91 514 aa18.77■□□□□ 0.6
HMGCS2-201ENST00000369406 APAF1O14727 1248 aa18.76■□□□□ 0.59
HMGCS2-201ENST00000369406 ESCO1Q5FWF5 840 aa18.76■□□□□ 0.59
HMGCS2-201ENST00000369406 ZNF335Q9H4Z2 1342 aaPredicted RBP18.76■□□□□ 0.59
HMGCS2-201ENST00000369406 C1orf167Q5SNV9 1468 aa18.76■□□□□ 0.59
HMGCS2-201ENST00000369406 CDK12Q9NYV4 1490 aaPredicted RBP18.76■□□□□ 0.59
HMGCS2-201ENST00000369406 TRPM3Q9HCF6 1732 aaPredicted RBP18.75■□□□□ 0.59
HMGCS2-201ENST00000369406 USP31Q70CQ4 1352 aa18.75■□□□□ 0.59
HMGCS2-201ENST00000369406 ZNF521Q96K83 1311 aa18.75■□□□□ 0.59
HMGCS2-201ENST00000369406 NUTM2GQ5VZR2 741 aa18.75■□□□□ 0.59
HMGCS2-201ENST00000369406 SUPT16HQ9Y5B9 1047 aaKnown RBP18.75■□□□□ 0.59
HMGCS2-201ENST00000369406 MST1RQ04912 1400 aa18.75■□□□□ 0.59
HMGCS2-201ENST00000369406 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
HMGCS2-201ENST00000369406 MYT1Q01538 1121 aa18.74■□□□□ 0.59
HMGCS2-201ENST00000369406 SOX12O15370 315 aa18.74■□□□□ 0.59
HMGCS2-201ENST00000369406 C19orf44Q9H6X5 657 aa18.74■□□□□ 0.59
HMGCS2-201ENST00000369406 NUDCQ9Y266 331 aa18.74■□□□□ 0.59
HMGCS2-201ENST00000369406 LRRC7Q96NW7 1537 aa18.73■□□□□ 0.59
HMGCS2-201ENST00000369406 U2AF1L5P0DN76 240 aaPredicted RBP18.73■□□□□ 0.59
HMGCS2-201ENST00000369406 U2AF1Q01081 240 aaKnown RBP eCLIP18.73■□□□□ 0.59
HMGCS2-201ENST00000369406 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
HMGCS2-201ENST00000369406 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
HMGCS2-201ENST00000369406 KIF1AQ12756 1690 aa18.72■□□□□ 0.59
HMGCS2-201ENST00000369406 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
HMGCS2-201ENST00000369406 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
HMGCS2-201ENST00000369406 DIAPH1O60610 1272 aaKnown RBP18.71■□□□□ 0.59
HMGCS2-201ENST00000369406 LTN1O94822 1766 aa18.7■□□□□ 0.58
HMGCS2-201ENST00000369406 FOXO3O43524 673 aa18.7■□□□□ 0.58
HMGCS2-201ENST00000369406 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
HMGCS2-201ENST00000369406 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
HMGCS2-201ENST00000369406 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
HMGCS2-201ENST00000369406 IL13P35225 146 aa18.69■□□□□ 0.58
HMGCS2-201ENST00000369406 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
HMGCS2-201ENST00000369406 RGPD1P0DJD0 1748 aa18.68■□□□□ 0.58
HMGCS2-201ENST00000369406 DCCP43146 1447 aa18.68■□□□□ 0.58
HMGCS2-201ENST00000369406 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
HMGCS2-201ENST00000369406 DDX17Q92841 729 aaKnown RBP18.68■□□□□ 0.58
HMGCS2-201ENST00000369406 NCOA3Q9Y6Q9 1424 aa18.68■□□□□ 0.58
HMGCS2-201ENST00000369406 NLRP6P59044 892 aa18.68■□□□□ 0.58
HMGCS2-201ENST00000369406 IRX6P78412 446 aaPredicted RBP18.68■□□□□ 0.58
HMGCS2-201ENST00000369406 ABTB2Q8N961 1025 aa18.67■□□□□ 0.58
HMGCS2-201ENST00000369406 MAP3K19Q56UN5 1328 aa18.67■□□□□ 0.58
HMGCS2-201ENST00000369406 ALS2Q96Q42 1657 aa18.67■□□□□ 0.58
HMGCS2-201ENST00000369406 FKBP8Q14318 412 aa18.66■□□□□ 0.58
HMGCS2-201ENST00000369406 NFAT5O94916 1531 aa18.66■□□□□ 0.58
HMGCS2-201ENST00000369406 PSME1Q06323 249 aa18.65■□□□□ 0.58
HMGCS2-201ENST00000369406 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
HMGCS2-201ENST00000369406 ATF3P18847 181 aa18.65■□□□□ 0.58
HMGCS2-201ENST00000369406 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
HMGCS2-201ENST00000369406 DLG5Q8TDM6 1919 aa18.65■□□□□ 0.58
HMGCS2-201ENST00000369406 PDE3BQ13370 1112 aa18.64■□□□□ 0.58
HMGCS2-201ENST00000369406 HMOX1P09601 288 aa18.64■□□□□ 0.57
HMGCS2-201ENST00000369406 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
HMGCS2-201ENST00000369406 EIF4A2Q14240 407 aaKnown RBP18.63■□□□□ 0.57
HMGCS2-201ENST00000369406 MSH6P52701 1360 aa18.63■□□□□ 0.57
HMGCS2-201ENST00000369406 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
HMGCS2-201ENST00000369406 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
HMGCS2-201ENST00000369406 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
HMGCS2-201ENST00000369406 SLFN5Q08AF3 891 aa18.6■□□□□ 0.57
HMGCS2-201ENST00000369406 KRT28Q7Z3Y7 464 aa18.6■□□□□ 0.57
HMGCS2-201ENST00000369406 AEBP1Q8IUX7 1158 aa18.6■□□□□ 0.57
HMGCS2-201ENST00000369406 PHACTR3Q96KR7 559 aa18.6■□□□□ 0.57
HMGCS2-201ENST00000369406 RGPD2P0DJD1 1756 aa18.6■□□□□ 0.57
HMGCS2-201ENST00000369406 SBNO1A3KN83 1393 aa18.6■□□□□ 0.57
HMGCS2-201ENST00000369406 PLEKHG5O94827 1062 aa18.6■□□□□ 0.57
HMGCS2-201ENST00000369406 PRKAR2BP31323 418 aa18.6■□□□□ 0.57
HMGCS2-201ENST00000369406 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms