RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 ARXQ96QS3 562 aa13.25□□□□□ -0.29
LYSMD1-201ENST00000368908 ARHGAP31Q2M1Z3 1444 aa13.25□□□□□ -0.29
LYSMD1-201ENST00000368908 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
LYSMD1-201ENST00000368908 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
LYSMD1-201ENST00000368908 MYOM2P54296 1465 aa13.25□□□□□ -0.29
LYSMD1-201ENST00000368908 NPATQ14207 1427 aa13.25□□□□□ -0.29
LYSMD1-201ENST00000368908 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
LYSMD1-201ENST00000368908 ADGRB2O60241 1585 aa13.24□□□□□ -0.29
LYSMD1-201ENST00000368908 MVPQ14764 893 aaKnown RBP13.24□□□□□ -0.29
LYSMD1-201ENST00000368908 TRIM44Q96DX7 344 aaPredicted RBP13.24□□□□□ -0.29
LYSMD1-201ENST00000368908 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
LYSMD1-201ENST00000368908 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
LYSMD1-201ENST00000368908 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
LYSMD1-201ENST00000368908 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
LYSMD1-201ENST00000368908 IFT172Q9UG01 1749 aa13.23□□□□□ -0.29
LYSMD1-201ENST00000368908 RBM25P49756 843 aaKnown RBP13.23□□□□□ -0.29
LYSMD1-201ENST00000368908 GBP4Q96PP9 640 aa13.23□□□□□ -0.29
LYSMD1-201ENST00000368908 CFAP65Q6ZU64 1925 aaKnown RBP13.23□□□□□ -0.29
LYSMD1-201ENST00000368908 MFAP1P55081 439 aaKnown RBP13.22□□□□□ -0.29
LYSMD1-201ENST00000368908 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
LYSMD1-201ENST00000368908 PDCL3Q9H2J4 239 aa13.22□□□□□ -0.29
LYSMD1-201ENST00000368908 IBTKQ9P2D0 1353 aaPredicted RBP13.22□□□□□ -0.29
LYSMD1-201ENST00000368908 TERF1P54274 439 aa13.21□□□□□ -0.29
LYSMD1-201ENST00000368908 CCDC173Q0VFZ6 552 aa13.21□□□□□ -0.29
LYSMD1-201ENST00000368908 PPP1R9BQ96SB3 815 aa13.21□□□□□ -0.29
LYSMD1-201ENST00000368908 CARD14Q9BXL6 1004 aa13.21□□□□□ -0.29
LYSMD1-201ENST00000368908 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
LYSMD1-201ENST00000368908 TNNQ9UQP3 1299 aa13.2□□□□□ -0.3
LYSMD1-201ENST00000368908 SPATA31D1Q6ZQQ2 1576 aa13.2□□□□□ -0.3
LYSMD1-201ENST00000368908 PREX1Q8TCU6 1659 aa13.2□□□□□ -0.3
LYSMD1-201ENST00000368908 SETD1BQ9UPS6 1966 aaKnown RBP13.2□□□□□ -0.3
LYSMD1-201ENST00000368908 ZKSCAN2Q63HK3 967 aa13.2□□□□□ -0.3
LYSMD1-201ENST00000368908 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
LYSMD1-201ENST00000368908 DZIP1LQ8IYY4 767 aaKnown RBP13.19□□□□□ -0.3
LYSMD1-201ENST00000368908 TNPO1Q92973 898 aaKnown RBP13.19□□□□□ -0.3
LYSMD1-201ENST00000368908 SETBP1Q9Y6X0 1596 aa13.18□□□□□ -0.3
LYSMD1-201ENST00000368908 CLEC17AQ6ZS10 378 aa13.17□□□□□ -0.3
LYSMD1-201ENST00000368908 GAS2L3Q86XJ1 694 aa13.17□□□□□ -0.3
LYSMD1-201ENST00000368908 KIF1BO60333 1816 aa13.17□□□□□ -0.3
LYSMD1-201ENST00000368908 ZNF142P52746 1687 aaPredicted RBP13.17□□□□□ -0.3
LYSMD1-201ENST00000368908 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
LYSMD1-201ENST00000368908 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
LYSMD1-201ENST00000368908 ZSCAN30Q86W11 494 aa13.16□□□□□ -0.3
LYSMD1-201ENST00000368908 FTSJ3Q8IY81 847 aaKnown RBP13.16□□□□□ -0.3
LYSMD1-201ENST00000368908 NSD3Q9BZ95 1437 aa13.16□□□□□ -0.3
LYSMD1-201ENST00000368908 OFD1O75665 1012 aa13.16□□□□□ -0.3
LYSMD1-201ENST00000368908 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
LYSMD1-201ENST00000368908 HS1BP3Q53T59 392 aa13.15□□□□□ -0.3
LYSMD1-201ENST00000368908 MAP7D2Q96T17 732 aa13.15□□□□□ -0.3
LYSMD1-201ENST00000368908 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
LYSMD1-201ENST00000368908 TNRQ92752 1358 aa13.15□□□□□ -0.3
LYSMD1-201ENST00000368908 NOS1P29475 1434 aa13.15□□□□□ -0.31
LYSMD1-201ENST00000368908 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
LYSMD1-201ENST00000368908 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
LYSMD1-201ENST00000368908 CALD1Q05682 793 aaKnown RBP13.14□□□□□ -0.31
LYSMD1-201ENST00000368908 KIAA1211Q6ZU35 1233 aa13.14□□□□□ -0.31
LYSMD1-201ENST00000368908 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
LYSMD1-201ENST00000368908 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
LYSMD1-201ENST00000368908 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
LYSMD1-201ENST00000368908 CFAP53Q96M91 514 aa13.13□□□□□ -0.31
LYSMD1-201ENST00000368908 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
LYSMD1-201ENST00000368908 ANP32BQ92688 251 aaKnown RBP13.13□□□□□ -0.31
LYSMD1-201ENST00000368908 NSD2O96028 1365 aa13.12□□□□□ -0.31
LYSMD1-201ENST00000368908 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
LYSMD1-201ENST00000368908 GOLGA6L22H0YM25 854 aa13.12□□□□□ -0.31
LYSMD1-201ENST00000368908 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
LYSMD1-201ENST00000368908 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
LYSMD1-201ENST00000368908 KLHL40Q2TBA0 621 aa13.12□□□□□ -0.31
LYSMD1-201ENST00000368908 A2ML1A8K2U0 1454 aa13.12□□□□□ -0.31
LYSMD1-201ENST00000368908 NUCB1Q02818 461 aa13.12□□□□□ -0.31
LYSMD1-201ENST00000368908 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
LYSMD1-201ENST00000368908 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
LYSMD1-201ENST00000368908 BMP2KLQ5H9B9 411 aa13.11□□□□□ -0.31
LYSMD1-201ENST00000368908 K7ELQ4 463 aaPredicted RBP13.11□□□□□ -0.31
LYSMD1-201ENST00000368908 TRIM27P14373 513 aa13.11□□□□□ -0.31
LYSMD1-201ENST00000368908 ATF7IPQ6VMQ6 1270 aa13.11□□□□□ -0.31
LYSMD1-201ENST00000368908 LMTK3Q96Q04 1460 aa13.11□□□□□ -0.31
LYSMD1-201ENST00000368908 ZNF445P59923 1031 aa13.1□□□□□ -0.31
LYSMD1-201ENST00000368908 IL16Q14005 1332 aa13.1□□□□□ -0.31
LYSMD1-201ENST00000368908 MSNP26038 577 aaKnown RBP13.1□□□□□ -0.31
LYSMD1-201ENST00000368908 KIF2CQ99661 725 aa13.1□□□□□ -0.31
LYSMD1-201ENST00000368908 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
LYSMD1-201ENST00000368908 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
LYSMD1-201ENST00000368908 MED14O60244 1454 aa13.09□□□□□ -0.31
LYSMD1-201ENST00000368908 FBXO31Q5XUX0 539 aaPredicted RBP13.09□□□□□ -0.31
LYSMD1-201ENST00000368908 UGGT1Q9NYU2 1555 aa13.09□□□□□ -0.31
LYSMD1-201ENST00000368908 ZNF500O60304 480 aaPredicted RBP13.08□□□□□ -0.32
LYSMD1-201ENST00000368908 CFAP70Q5T0N1 1121 aa13.08□□□□□ -0.32
LYSMD1-201ENST00000368908 ITPRIPQ8IWB1 547 aa13.08□□□□□ -0.32
LYSMD1-201ENST00000368908 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
LYSMD1-201ENST00000368908 RIPK4P57078 832 aa13.07□□□□□ -0.32
LYSMD1-201ENST00000368908 SLC52A1Q9NWF4 448 aa13.07□□□□□ -0.32
LYSMD1-201ENST00000368908 UBR1Q8IWV7 1749 aa13.07□□□□□ -0.32
LYSMD1-201ENST00000368908 MTHFSP49914 203 aa13.06□□□□□ -0.32
LYSMD1-201ENST00000368908 MTERF4Q7Z6M4 381 aaKnown RBP13.06□□□□□ -0.32
LYSMD1-201ENST00000368908 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
LYSMD1-201ENST00000368908 ADGRB3O60242 1522 aa13.06□□□□□ -0.32
LYSMD1-201ENST00000368908 SSH1Q8WYL5 1049 aa13.06□□□□□ -0.32
LYSMD1-201ENST00000368908 PDLIM2Q96JY6 352 aa13.06□□□□□ -0.32
LYSMD1-201ENST00000368908 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms