RNA–Protein interactions for RNA: ENST00000368892.8

VPS72-202, Transcript of vacuolar protein sorting 72 homolog, humanhuman

APPRIS P1 TSL 1 (best)

Gene VPS72, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-202ENST00000368892 NHSL1Q5SYE7 1610 aa28.18■■■□□ 2.1
VPS72-202ENST00000368892 AHDC1Q5TGY3 1603 aaPredicted RBP28.17■■■□□ 2.1
VPS72-202ENST00000368892 TTC21AQ8NDW8 1320 aa28.17■■■□□ 2.1
VPS72-202ENST00000368892 SBNO1A3KN83 1393 aa28.17■■■□□ 2.1
VPS72-202ENST00000368892 CGNL1Q0VF96 1302 aa28.15■■■□□ 2.1
VPS72-202ENST00000368892 TRPM3Q9HCF6 1732 aaPredicted RBP28.15■■■□□ 2.1
VPS72-202ENST00000368892 FYB1O15117 783 aa28.14■■■□□ 2.1
VPS72-202ENST00000368892 PIP4K2BP78356 416 aa28.13■■■□□ 2.09
VPS72-202ENST00000368892 XPCQ01831 940 aaPredicted RBP28.13■■■□□ 2.09
VPS72-202ENST00000368892 NSD2O96028 1365 aa28.12■■■□□ 2.09
VPS72-202ENST00000368892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.12■■■□□ 2.09
VPS72-202ENST00000368892 USP31Q70CQ4 1352 aa28.1■■■□□ 2.09
VPS72-202ENST00000368892 DIEXFQ68CQ4 756 aaKnown RBP28.09■■■□□ 2.09
VPS72-202ENST00000368892 SPATA31A3Q5VYP0 1347 aa28.09■■■□□ 2.09
VPS72-202ENST00000368892 NME9Q86XW9 330 aa28.08■■■□□ 2.09
VPS72-202ENST00000368892 TNS3Q68CZ2 1445 aa28.07■■■□□ 2.08
VPS72-202ENST00000368892 PIK3C2AO00443 1686 aa28.06■■■□□ 2.08
VPS72-202ENST00000368892 ALS2Q96Q42 1657 aa28.06■■■□□ 2.08
VPS72-202ENST00000368892 PAK3O75914 559 aaPredicted RBP28.06■■■□□ 2.08
VPS72-202ENST00000368892 OVOS2A0A0J9YW53 1432 aa28.05■■■□□ 2.08
VPS72-202ENST00000368892 OVOS2Q6IE36 1432 aa28.05■■■□□ 2.08
VPS72-202ENST00000368892 SCAF1Q9H7N4 1312 aaKnown RBP28.05■■■□□ 2.08
VPS72-202ENST00000368892 ABTB2Q8N961 1025 aa28.04■■■□□ 2.08
VPS72-202ENST00000368892 GGNBP2Q9H3C7 697 aa28.04■■■□□ 2.08
VPS72-202ENST00000368892 USP54Q70EL1 1684 aa28.03■■■□□ 2.08
VPS72-202ENST00000368892 ZRANB1Q9UGI0 708 aa28.02■■■□□ 2.08
VPS72-202ENST00000368892 COL16A1Q07092 1604 aaPredicted RBP28.02■■■□□ 2.08
VPS72-202ENST00000368892 ARHGEF10O15013 1369 aa28.02■■■□□ 2.08
VPS72-202ENST00000368892 PARD3Q8TEW0 1356 aa28.02■■■□□ 2.08
VPS72-202ENST00000368892 CC2D1BQ5T0F9 858 aaKnown RBP28.02■■■□□ 2.08
VPS72-202ENST00000368892 LRRC59Q96AG4 307 aaKnown RBP28.02■■■□□ 2.08
VPS72-202ENST00000368892 KIF20BQ96Q89 1820 aa28.01■■■□□ 2.08
VPS72-202ENST00000368892 PRKRIP1Q9H875 184 aaPredicted RBP28■■■□□ 2.07
VPS72-202ENST00000368892 NLRP6P59044 892 aa27.99■■■□□ 2.07
VPS72-202ENST00000368892 COG3Q96JB2 828 aa27.99■■■□□ 2.07
VPS72-202ENST00000368892 PHLPP1O60346 1717 aa27.99■■■□□ 2.07
VPS72-202ENST00000368892 NLRP13Q86W25 1043 aa27.98■■■□□ 2.07
VPS72-202ENST00000368892 USP19O94966 1318 aa27.98■■■□□ 2.07
VPS72-202ENST00000368892 ANKRD26Q9UPS8 1709 aa27.98■■■□□ 2.07
VPS72-202ENST00000368892 RALBP1Q15311 655 aa27.97■■■□□ 2.07
VPS72-202ENST00000368892 MARF1Q9Y4F3 1742 aaKnown RBP27.96■■■□□ 2.07
VPS72-202ENST00000368892 MED1Q15648 1581 aaPredicted RBP27.96■■■□□ 2.07
VPS72-202ENST00000368892 MORC1Q86VD1 984 aa27.95■■■□□ 2.06
VPS72-202ENST00000368892 ANP32CO43423 234 aa27.94■■■□□ 2.06
VPS72-202ENST00000368892 NUTM2GQ5VZR2 741 aa27.94■■■□□ 2.06
VPS72-202ENST00000368892 SLIT3O75094 1523 aa27.93■■■□□ 2.06
VPS72-202ENST00000368892 PNPLA6Q8IY17 1366 aa27.92■■■□□ 2.06
VPS72-202ENST00000368892 LMOD2Q6P5Q4 547 aa27.92■■■□□ 2.06
VPS72-202ENST00000368892 AATKQ6ZMQ8 1374 aa27.92■■■□□ 2.06
VPS72-202ENST00000368892 HSPA1LP34931 641 aa27.9■■■□□ 2.06
VPS72-202ENST00000368892 FBXO41Q8TF61 875 aa27.9■■■□□ 2.06
VPS72-202ENST00000368892 COL22A1Q8NFW1 1626 aaPredicted RBP27.89■■■□□ 2.06
VPS72-202ENST00000368892 CNGB1Q14028 1251 aaPredicted RBP27.89■■■□□ 2.06
VPS72-202ENST00000368892 CRYBG1Q9Y4K1 1723 aa27.88■■■□□ 2.05
VPS72-202ENST00000368892 GCP02774 474 aa27.87■■■□□ 2.05
VPS72-202ENST00000368892 KCNH5Q8NCM2 988 aa27.87■■■□□ 2.05
VPS72-202ENST00000368892 NFAT5O94916 1531 aa27.87■■■□□ 2.05
VPS72-202ENST00000368892 JCADQ9P266 1359 aa27.86■■■□□ 2.05
VPS72-202ENST00000368892 PPP2R1AP30153 589 aa27.85■■■□□ 2.05
VPS72-202ENST00000368892 MYBBP1AQ9BQG0 1328 aaKnown RBP27.84■■■□□ 2.05
VPS72-202ENST00000368892 FBLN1P23142 703 aa27.83■■■□□ 2.05
VPS72-202ENST00000368892 CABLES1Q8TDN4 633 aa27.83■■■□□ 2.05
VPS72-202ENST00000368892 TNNT2P45379 298 aaPredicted RBP27.82■■■□□ 2.04
VPS72-202ENST00000368892 POLKQ9UBT6 870 aa27.82■■■□□ 2.04
VPS72-202ENST00000368892 SHPRHQ149N8 1683 aa27.82■■■□□ 2.04
VPS72-202ENST00000368892 PHRF1Q9P1Y6 1649 aaKnown RBP27.82■■■□□ 2.04
VPS72-202ENST00000368892 SMG6Q86US8 1419 aaKnown RBP27.82■■■□□ 2.04
VPS72-202ENST00000368892 MIER1Q8N108 512 aa27.8■■■□□ 2.04
VPS72-202ENST00000368892 CPDO75976 1380 aa27.79■■■□□ 2.04
VPS72-202ENST00000368892 ARHGEF25Q86VW2 580 aa27.79■■■□□ 2.04
VPS72-202ENST00000368892 ABCA3Q99758 1704 aa27.79■■■□□ 2.04
VPS72-202ENST00000368892 MAP3K19Q56UN5 1328 aa27.78■■■□□ 2.04
VPS72-202ENST00000368892 KIF24Q5T7B8 1368 aa27.78■■■□□ 2.04
VPS72-202ENST00000368892 RRS1Q15050 365 aaKnown RBP27.77■■■□□ 2.04
VPS72-202ENST00000368892 SOX12O15370 315 aa27.76■■■□□ 2.03
VPS72-202ENST00000368892 MTHFSP49914 203 aa27.76■■■□□ 2.03
VPS72-202ENST00000368892 EMILIN1Q9Y6C2 1016 aa27.76■■■□□ 2.03
VPS72-202ENST00000368892 INSRP06213 1382 aa27.75■■■□□ 2.03
VPS72-202ENST00000368892 SPATA31A6Q5VVP1 1343 aa27.75■■■□□ 2.03
VPS72-202ENST00000368892 PLEKHG5O94827 1062 aa27.72■■■□□ 2.03
VPS72-202ENST00000368892 RTL1A6NKG5 1358 aa27.72■■■□□ 2.03
VPS72-202ENST00000368892 CCER2I3L3R5 266 aa27.72■■■□□ 2.03
VPS72-202ENST00000368892 MAP2P11137 1827 aaKnown RBP27.72■■■□□ 2.03
VPS72-202ENST00000368892 ZC3H6P61129 1189 aaKnown RBP27.72■■■□□ 2.03
VPS72-202ENST00000368892 KIAA0232Q92628 1395 aa27.72■■■□□ 2.03
VPS72-202ENST00000368892 CDK12Q9NYV4 1490 aaPredicted RBP27.72■■■□□ 2.03
VPS72-202ENST00000368892 ABCC6O95255 1503 aa27.7■■■□□ 2.03
VPS72-202ENST00000368892 FLT4P35916 1363 aa27.7■■■□□ 2.02
VPS72-202ENST00000368892 PEAK1Q9H792 1746 aa27.7■■■□□ 2.02
VPS72-202ENST00000368892 IP6K1Q92551 441 aa27.69■■■□□ 2.02
VPS72-202ENST00000368892 HOXC9P31274 260 aa27.68■■■□□ 2.02
VPS72-202ENST00000368892 HAP1P54257 671 aaPredicted RBP27.68■■■□□ 2.02
VPS72-202ENST00000368892 CCDC184Q52MB2 194 aa27.67■■■□□ 2.02
VPS72-202ENST00000368892 COL3A1P02461 1466 aaPredicted RBP27.67■■■□□ 2.02
VPS72-202ENST00000368892 LTN1O94822 1766 aa27.66■■■□□ 2.02
VPS72-202ENST00000368892 AMPHP49418 695 aa27.66■■■□□ 2.02
VPS72-202ENST00000368892 COL18A1P39060 1754 aa27.66■■■□□ 2.02
VPS72-202ENST00000368892 PRDM11Q9NQV5 511 aa27.65■■■□□ 2.02
VPS72-202ENST00000368892 BLMP54132 1417 aaPredicted RBP27.64■■■□□ 2.02
VPS72-202ENST00000368892 FAM83GA6ND36 823 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms