RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 TTC21BQ7Z4L5 1316 aa26.01■■□□□ 1.75
CHTOP-204ENST00000368694 C19orf44Q9H6X5 657 aa26■■□□□ 1.75
CHTOP-204ENST00000368694 COG3Q96JB2 828 aa25.99■■□□□ 1.75
CHTOP-204ENST00000368694 PHF8Q9UPP1 1060 aa25.99■■□□□ 1.75
CHTOP-204ENST00000368694 CFAP53Q96M91 514 aa25.98■■□□□ 1.75
CHTOP-204ENST00000368694 ZRANB1Q9UGI0 708 aa25.98■■□□□ 1.75
CHTOP-204ENST00000368694 ESCO1Q5FWF5 840 aa25.97■■□□□ 1.75
CHTOP-204ENST00000368694 ADAMTS8Q9UP79 889 aa25.97■■□□□ 1.75
CHTOP-204ENST00000368694 ZBED9Q6R2W3 1325 aa25.97■■□□□ 1.75
CHTOP-204ENST00000368694 NCOA3Q9Y6Q9 1424 aa25.97■■□□□ 1.75
CHTOP-204ENST00000368694 SSH2Q76I76 1423 aa25.96■■□□□ 1.75
CHTOP-204ENST00000368694 MAP2P11137 1827 aaKnown RBP25.95■■□□□ 1.75
CHTOP-204ENST00000368694 SHPRHQ149N8 1683 aa25.95■■□□□ 1.75
CHTOP-204ENST00000368694 SENP3-EIF4A1A0A087X0R7 540 aa25.95■■□□□ 1.74
CHTOP-204ENST00000368694 TTC21AQ8NDW8 1320 aa25.95■■□□□ 1.74
CHTOP-204ENST00000368694 ZNF335Q9H4Z2 1342 aaPredicted RBP25.95■■□□□ 1.74
CHTOP-204ENST00000368694 BLMP54132 1417 aaPredicted RBP25.94■■□□□ 1.74
CHTOP-204ENST00000368694 XIRP1Q702N8 1843 aaKnown RBP25.94■■□□□ 1.74
CHTOP-204ENST00000368694 ATF3P18847 181 aa25.94■■□□□ 1.74
CHTOP-204ENST00000368694 INSRP06213 1382 aa25.94■■□□□ 1.74
CHTOP-204ENST00000368694 MYT1Q01538 1121 aa25.93■■□□□ 1.74
CHTOP-204ENST00000368694 DCCP43146 1447 aa25.92■■□□□ 1.74
CHTOP-204ENST00000368694 DMRT2Q9Y5R5 561 aa25.92■■□□□ 1.74
CHTOP-204ENST00000368694 PIK3C2AO00443 1686 aa25.91■■□□□ 1.74
CHTOP-204ENST00000368694 MSH6P52701 1360 aa25.9■■□□□ 1.74
CHTOP-204ENST00000368694 OVOS2A0A0J9YW53 1432 aa25.9■■□□□ 1.74
CHTOP-204ENST00000368694 OVOS2Q6IE36 1432 aa25.9■■□□□ 1.74
CHTOP-204ENST00000368694 FBLN1P23142 703 aa25.9■■□□□ 1.74
CHTOP-204ENST00000368694 C1orf167Q5SNV9 1468 aa25.9■■□□□ 1.74
CHTOP-204ENST00000368694 ORAI2Q96SN7 254 aa25.89■■□□□ 1.74
CHTOP-204ENST00000368694 LRRC7Q96NW7 1537 aa25.88■■□□□ 1.73
CHTOP-204ENST00000368694 PPM1GO15355 546 aaPredicted RBP25.88■■□□□ 1.73
CHTOP-204ENST00000368694 PAK3O75914 559 aaPredicted RBP25.88■■□□□ 1.73
CHTOP-204ENST00000368694 KIF1AQ12756 1690 aa25.88■■□□□ 1.73
CHTOP-204ENST00000368694 PSME1Q06323 249 aa25.87■■□□□ 1.73
CHTOP-204ENST00000368694 CADPS2Q86UW7 1296 aa25.87■■□□□ 1.73
CHTOP-204ENST00000368694 POLKQ9UBT6 870 aa25.87■■□□□ 1.73
CHTOP-204ENST00000368694 AATKQ6ZMQ8 1374 aa25.87■■□□□ 1.73
CHTOP-204ENST00000368694 MST1RQ04912 1400 aa25.86■■□□□ 1.73
CHTOP-204ENST00000368694 COL3A1P02461 1466 aaPredicted RBP25.85■■□□□ 1.73
CHTOP-204ENST00000368694 SALL2Q9Y467 1007 aaPredicted RBP25.84■■□□□ 1.73
CHTOP-204ENST00000368694 EMILIN1Q9Y6C2 1016 aa25.84■■□□□ 1.73
CHTOP-204ENST00000368694 FOXO3O43524 673 aa25.83■■□□□ 1.73
CHTOP-204ENST00000368694 RRS1Q15050 365 aaKnown RBP25.83■■□□□ 1.72
CHTOP-204ENST00000368694 CCDC146Q8IYE0 955 aa25.83■■□□□ 1.72
CHTOP-204ENST00000368694 ABTB2Q8N961 1025 aa25.83■■□□□ 1.72
CHTOP-204ENST00000368694 NLRP6P59044 892 aa25.82■■□□□ 1.72
CHTOP-204ENST00000368694 SMG6Q86US8 1419 aaKnown RBP25.82■■□□□ 1.72
CHTOP-204ENST00000368694 USP31Q70CQ4 1352 aa25.82■■□□□ 1.72
CHTOP-204ENST00000368694 NUDCQ9Y266 331 aa25.81■■□□□ 1.72
CHTOP-204ENST00000368694 PNPLA6Q8IY17 1366 aa25.81■■□□□ 1.72
CHTOP-204ENST00000368694 SOX12O15370 315 aa25.81■■□□□ 1.72
CHTOP-204ENST00000368694 CDK12Q9NYV4 1490 aaPredicted RBP25.8■■□□□ 1.72
CHTOP-204ENST00000368694 NUTM2GQ5VZR2 741 aa25.8■■□□□ 1.72
CHTOP-204ENST00000368694 MARF1Q9Y4F3 1742 aaKnown RBP25.8■■□□□ 1.72
CHTOP-204ENST00000368694 DIAPH1O60610 1272 aaKnown RBP25.79■■□□□ 1.72
CHTOP-204ENST00000368694 USP54Q70EL1 1684 aa25.79■■□□□ 1.72
CHTOP-204ENST00000368694 U2SURPO15042 1029 aaKnown RBP25.79■■□□□ 1.72
CHTOP-204ENST00000368694 U2AF1L5P0DN76 240 aaPredicted RBP25.79■■□□□ 1.72
CHTOP-204ENST00000368694 U2AF1Q01081 240 aaKnown RBP eCLIP25.79■■□□□ 1.727e-8■■■■■ 27.9
CHTOP-204ENST00000368694 XPCQ01831 940 aaPredicted RBP25.78■■□□□ 1.72
CHTOP-204ENST00000368694 TRPM3Q9HCF6 1732 aaPredicted RBP25.75■■□□□ 1.71
CHTOP-204ENST00000368694 KRT28Q7Z3Y7 464 aa25.73■■□□□ 1.71
CHTOP-204ENST00000368694 APAF1O14727 1248 aa25.73■■□□□ 1.71
CHTOP-204ENST00000368694 PEAK1Q9H792 1746 aa25.72■■□□□ 1.71
CHTOP-204ENST00000368694 RUNDC1Q96C34 613 aa25.72■■□□□ 1.71
CHTOP-204ENST00000368694 LMOD2Q6P5Q4 547 aa25.7■■□□□ 1.71
CHTOP-204ENST00000368694 MAP3K19Q56UN5 1328 aa25.69■■□□□ 1.7
CHTOP-204ENST00000368694 NPHP3Q7Z494 1330 aa25.68■■□□□ 1.7
CHTOP-204ENST00000368694 DDX17Q92841 729 aaKnown RBP25.68■■□□□ 1.7
CHTOP-204ENST00000368694 SLAIN2Q9P270 581 aa25.67■■□□□ 1.7
CHTOP-204ENST00000368694 LTN1O94822 1766 aa25.66■■□□□ 1.7
CHTOP-204ENST00000368694 IL13P35225 146 aa25.66■■□□□ 1.7
CHTOP-204ENST00000368694 SBNO1A3KN83 1393 aa25.66■■□□□ 1.7
CHTOP-204ENST00000368694 ALS2Q96Q42 1657 aa25.65■■□□□ 1.7
CHTOP-204ENST00000368694 AMPHP49418 695 aa25.65■■□□□ 1.7
CHTOP-204ENST00000368694 PDE3BQ13370 1112 aa25.65■■□□□ 1.7
CHTOP-204ENST00000368694 FLT4P35916 1363 aa25.65■■□□□ 1.7
CHTOP-204ENST00000368694 IQSEC2Q5JU85 1478 aa25.65■■□□□ 1.7
CHTOP-204ENST00000368694 BRINP3Q76B58 766 aa25.65■■□□□ 1.7
CHTOP-204ENST00000368694 TCP11L2Q8N4U5 519 aa25.64■■□□□ 1.7
CHTOP-204ENST00000368694 PLEKHG5O94827 1062 aa25.64■■□□□ 1.69
CHTOP-204ENST00000368694 HSP90AB2PQ58FF8 381 aa25.64■■□□□ 1.69
CHTOP-204ENST00000368694 PNNQ9H307 717 aaKnown RBP25.63■■□□□ 1.69
CHTOP-204ENST00000368694 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
CHTOP-204ENST00000368694 NEUROD2Q15784 382 aa25.62■■□□□ 1.69
CHTOP-204ENST00000368694 NGEFQ8N5V2 710 aa25.62■■□□□ 1.69
CHTOP-204ENST00000368694 NFAT5O94916 1531 aa25.62■■□□□ 1.69
CHTOP-204ENST00000368694 EIF4A2Q14240 407 aaKnown RBP25.62■■□□□ 1.69
CHTOP-204ENST00000368694 KCNH5Q8NCM2 988 aa25.62■■□□□ 1.69
CHTOP-204ENST00000368694 FCHSD2O94868 740 aa25.6■■□□□ 1.69
CHTOP-204ENST00000368694 HMOX1P09601 288 aa25.6■■□□□ 1.69
CHTOP-204ENST00000368694 PLEKHF1Q96S99 279 aa25.6■■□□□ 1.69
CHTOP-204ENST00000368694 RRP7AQ9Y3A4 280 aaKnown RBP25.6■■□□□ 1.69
CHTOP-204ENST00000368694 PXDNQ92626 1479 aa25.6■■□□□ 1.69
CHTOP-204ENST00000368694 CDCA7LQ96GN5 454 aa25.6■■□□□ 1.69
CHTOP-204ENST00000368694 ZNF521Q96K83 1311 aa25.59■■□□□ 1.69
CHTOP-204ENST00000368694 SLIT3O75094 1523 aa25.59■■□□□ 1.69
CHTOP-204ENST00000368694 KIF24Q5T7B8 1368 aa25.59■■□□□ 1.69
CHTOP-204ENST00000368694 LTBP4Q8N2S1 1624 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms