RNA–Protein interactions for RNA: ENST00000368517.7

SYCE1-203, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYCE1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-203ENST00000368517 L3MBTL2Q969R5 705 aa24.47■■□□□ 1.51
SYCE1-203ENST00000368517 SIN3AQ96ST3 1273 aa24.47■■□□□ 1.51
SYCE1-203ENST00000368517 POLR3AO14802 1390 aaPredicted RBP24.45■■□□□ 1.51
SYCE1-203ENST00000368517 COL14A1Q05707 1796 aaKnown RBP24.44■■□□□ 1.5
SYCE1-203ENST00000368517 SEPT12Q8IYM1 358 aa24.44■■□□□ 1.5
SYCE1-203ENST00000368517 BTG4Q9NY30 223 aa24.43■■□□□ 1.5
SYCE1-203ENST00000368517 CCDC9Q9Y3X0 531 aaKnown RBP24.43■■□□□ 1.5
SYCE1-203ENST00000368517 ACEP12821 1306 aa24.43■■□□□ 1.5
SYCE1-203ENST00000368517 ONECUT3O60422 494 aaPredicted RBP24.42■■□□□ 1.5
SYCE1-203ENST00000368517 CENPJQ9HC77 1338 aaPredicted RBP24.42■■□□□ 1.5
SYCE1-203ENST00000368517 CCDC61Q9Y6R9 512 aa24.42■■□□□ 1.5
SYCE1-203ENST00000368517 PHRF1Q9P1Y6 1649 aaKnown RBP24.41■■□□□ 1.5
SYCE1-203ENST00000368517 PLEKHG3A1L390 1219 aa24.41■■□□□ 1.5
SYCE1-203ENST00000368517 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
SYCE1-203ENST00000368517 QRICH2Q9H0J4 1663 aa24.4■■□□□ 1.5
SYCE1-203ENST00000368517 NUTM2GQ5VZR2 741 aa24.4■■□□□ 1.5
SYCE1-203ENST00000368517 TRPM1Q7Z4N2 1603 aa24.39■■□□□ 1.5
SYCE1-203ENST00000368517 CABP2Q9NPB3 220 aa24.38■■□□□ 1.49
SYCE1-203ENST00000368517 KIAA0232Q92628 1395 aa24.38■■□□□ 1.49
SYCE1-203ENST00000368517 NEUROD1Q13562 356 aa24.37■■□□□ 1.49
SYCE1-203ENST00000368517 PRDM11Q9NQV5 511 aa24.37■■□□□ 1.49
SYCE1-203ENST00000368517 FAM98CQ17RN3 349 aaKnown RBP24.36■■□□□ 1.49
SYCE1-203ENST00000368517 CCDC125Q86Z20 511 aa24.36■■□□□ 1.49
SYCE1-203ENST00000368517 PPIP5K1Q6PFW1 1433 aa24.36■■□□□ 1.49
SYCE1-203ENST00000368517 BLMP54132 1417 aaPredicted RBP24.35■■□□□ 1.49
SYCE1-203ENST00000368517 SRPK2P78362 688 aaKnown RBP24.35■■□□□ 1.49
SYCE1-203ENST00000368517 CHRNA2Q15822 529 aa24.35■■□□□ 1.49
SYCE1-203ENST00000368517 SPATA31A5Q5VU36 1347 aa24.34■■□□□ 1.49
SYCE1-203ENST00000368517 SPATA31A7Q8IWB4 1347 aa24.34■■□□□ 1.49
SYCE1-203ENST00000368517 KRT27Q7Z3Y8 459 aa24.34■■□□□ 1.49
SYCE1-203ENST00000368517 NRKQ7Z2Y5 1582 aa24.34■■□□□ 1.49
SYCE1-203ENST00000368517 SRCAPQ6ZRS2 3230 aa24.33■■□□□ 1.49
SYCE1-203ENST00000368517 ZC3H6P61129 1189 aaKnown RBP24.32■■□□□ 1.48
SYCE1-203ENST00000368517 DEFB132Q7Z7B7 95 aa24.31■■□□□ 1.48
SYCE1-203ENST00000368517 USP19O94966 1318 aa24.31■■□□□ 1.48
SYCE1-203ENST00000368517 A0A0G2JS52 829 aa24.3■■□□□ 1.48
SYCE1-203ENST00000368517 MYT1Q01538 1121 aa24.3■■□□□ 1.48
SYCE1-203ENST00000368517 THSD7AQ9UPZ6 1657 aa24.3■■□□□ 1.48
SYCE1-203ENST00000368517 ABTB2Q8N961 1025 aa24.29■■□□□ 1.48
SYCE1-203ENST00000368517 ROCK2O75116 1388 aaKnown RBP24.29■■□□□ 1.48
SYCE1-203ENST00000368517 CABP1Q9NZU7 370 aa24.28■■□□□ 1.48
SYCE1-203ENST00000368517 SPATA31A1Q5TZJ5 1347 aa24.26■■□□□ 1.47
SYCE1-203ENST00000368517 USP6P35125 1406 aa24.26■■□□□ 1.47
SYCE1-203ENST00000368517 FAM182BQ5T319 152 aa24.26■■□□□ 1.47
SYCE1-203ENST00000368517 STRN4Q9NRL3 753 aa24.26■■□□□ 1.47
SYCE1-203ENST00000368517 LMO7Q8WWI1 1683 aa24.25■■□□□ 1.47
SYCE1-203ENST00000368517 CAMTA1Q9Y6Y1 1673 aa24.25■■□□□ 1.47
SYCE1-203ENST00000368517 ZRANB1Q9UGI0 708 aa24.24■■□□□ 1.47
SYCE1-203ENST00000368517 CPDO75976 1380 aa24.24■■□□□ 1.47
SYCE1-203ENST00000368517 SSH2Q76I76 1423 aa24.23■■□□□ 1.47
SYCE1-203ENST00000368517 EVC2Q86UK5 1308 aa24.23■■□□□ 1.47
SYCE1-203ENST00000368517 GCP02774 474 aa24.21■■□□□ 1.47
SYCE1-203ENST00000368517 NLRP13Q86W25 1043 aa24.21■■□□□ 1.47
SYCE1-203ENST00000368517 BRD4O60885 1362 aaPredicted RBP24.2■■□□□ 1.47
SYCE1-203ENST00000368517 PIK3C2AO00443 1686 aa24.2■■□□□ 1.46
SYCE1-203ENST00000368517 SF3B2Q13435 895 aaKnown RBP24.19■■□□□ 1.46
SYCE1-203ENST00000368517 SLIT3O75094 1523 aa24.19■■□□□ 1.46
SYCE1-203ENST00000368517 LARP1Q6PKG0 1096 aaKnown RBP24.18■■□□□ 1.46
SYCE1-203ENST00000368517 USP35Q9P2H5 1018 aa24.17■■□□□ 1.46
SYCE1-203ENST00000368517 AKAP12Q02952 1782 aa24.16■■□□□ 1.46
SYCE1-203ENST00000368517 NLRP6P59044 892 aa24.16■■□□□ 1.46
SYCE1-203ENST00000368517 COL5A2P05997 1499 aaPredicted RBP24.15■■□□□ 1.46
SYCE1-203ENST00000368517 EVA1CP58658 441 aa24.15■■□□□ 1.46
SYCE1-203ENST00000368517 RGPD1P0DJD0 1748 aa24.14■■□□□ 1.45
SYCE1-203ENST00000368517 TNS1Q9HBL0 1735 aaKnown RBP24.14■■□□□ 1.45
SYCE1-203ENST00000368517 BARGINQ6ZT62 677 aa24.13■■□□□ 1.45
SYCE1-203ENST00000368517 CPSF1Q10570 1443 aaKnown RBP24.13■■□□□ 1.45
SYCE1-203ENST00000368517 BAG6P46379 1132 aa24.12■■□□□ 1.45
SYCE1-203ENST00000368517 TTC21BQ7Z4L5 1316 aa24.12■■□□□ 1.45
SYCE1-203ENST00000368517 COL18A1P39060 1754 aa24.11■■□□□ 1.45
SYCE1-203ENST00000368517 SBNO2Q9Y2G9 1366 aa24.11■■□□□ 1.45
SYCE1-203ENST00000368517 ZBTB7CA1YPR0 619 aa24.11■■□□□ 1.45
SYCE1-203ENST00000368517 CARD11Q9BXL7 1154 aa24.11■■□□□ 1.45
SYCE1-203ENST00000368517 AATKQ6ZMQ8 1374 aa24.1■■□□□ 1.45
SYCE1-203ENST00000368517 EN1Q05925 392 aaPredicted RBP24.1■■□□□ 1.45
SYCE1-203ENST00000368517 TCP11L2Q8N4U5 519 aa24.1■■□□□ 1.45
SYCE1-203ENST00000368517 TONSLQ96HA7 1378 aa24.09■■□□□ 1.45
SYCE1-203ENST00000368517 DISP2A7MBM2 1401 aa24.09■■□□□ 1.45
SYCE1-203ENST00000368517 ZNF692Q9BU19 519 aaPredicted RBP24.07■■□□□ 1.44
SYCE1-203ENST00000368517 CD163L1Q9NR16 1453 aa24.07■■□□□ 1.44
SYCE1-203ENST00000368517 MON2Q7Z3U7 1717 aa24.06■■□□□ 1.44
SYCE1-203ENST00000368517 TRIM37O94972 964 aa24.06■■□□□ 1.44
SYCE1-203ENST00000368517 AXIN2Q9Y2T1 843 aa24.06■■□□□ 1.44
SYCE1-203ENST00000368517 CRB1P82279 1406 aa24.06■■□□□ 1.44
SYCE1-203ENST00000368517 FAM196AQ6ZSG2 479 aa24.05■■□□□ 1.44
SYCE1-203ENST00000368517 PARP4Q9UKK3 1724 aaKnown RBP24.05■■□□□ 1.44
SYCE1-203ENST00000368517 KTN1Q86UP2 1357 aaKnown RBP24.05■■□□□ 1.44
SYCE1-203ENST00000368517 TTC21AQ8NDW8 1320 aa24.05■■□□□ 1.44
SYCE1-203ENST00000368517 NFAT5O94916 1531 aa24.04■■□□□ 1.44
SYCE1-203ENST00000368517 PSDA5PKW4 1024 aaPredicted RBP24.03■■□□□ 1.44
SYCE1-203ENST00000368517 SOX12O15370 315 aa24.03■■□□□ 1.44
SYCE1-203ENST00000368517 ARHGEF25Q86VW2 580 aa24.03■■□□□ 1.44
SYCE1-203ENST00000368517 THRAP3Q9Y2W1 955 aaKnown RBP24.03■■□□□ 1.44
SYCE1-203ENST00000368517 PDE3BQ13370 1112 aa24.02■■□□□ 1.44
SYCE1-203ENST00000368517 EZH2Q15910 746 aaKnown RBP24.02■■□□□ 1.44
SYCE1-203ENST00000368517 RGPD5Q99666 1765 aa24.01■■□□□ 1.43
SYCE1-203ENST00000368517 TRIM26Q12899 539 aaPredicted RBP24.01■■□□□ 1.43
SYCE1-203ENST00000368517 CAMKK2Q96RR4 588 aa24.01■■□□□ 1.43
SYCE1-203ENST00000368517 LRRC37A3O60309 1634 aa23.99■■□□□ 1.43
SYCE1-203ENST00000368517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms