RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 THEMISQ8N1K5 641 aaPredicted RBP32.61■■■□□ 2.81
CLK2-203ENST00000368361 ADGRB2O60241 1585 aa32.61■■■□□ 2.81
CLK2-203ENST00000368361 PRR36Q9H6K5 1346 aa32.6■■■□□ 2.81
CLK2-203ENST00000368361 PHF23Q9BUL5 403 aaPredicted RBP32.6■■■□□ 2.81
CLK2-203ENST00000368361 U2SURPO15042 1029 aaKnown RBP32.59■■■□□ 2.81
CLK2-203ENST00000368361 MON2Q7Z3U7 1717 aa32.58■■■□□ 2.81
CLK2-203ENST00000368361 PNPLA6Q8IY17 1366 aa32.58■■■□□ 2.81
CLK2-203ENST00000368361 C20orf194Q5TEA3 1177 aa32.57■■■□□ 2.8
CLK2-203ENST00000368361 FBLN1P23142 703 aa32.56■■■□□ 2.8
CLK2-203ENST00000368361 CRBNQ96SW2 442 aa32.56■■■□□ 2.8
CLK2-203ENST00000368361 AKAP12Q02952 1782 aa32.56■■■□□ 2.8
CLK2-203ENST00000368361 ITSN1Q15811 1721 aa32.55■■■□□ 2.8
CLK2-203ENST00000368361 NME9Q86XW9 330 aa32.55■■■□□ 2.8
CLK2-203ENST00000368361 TBX22Q9Y458 520 aa32.55■■■□□ 2.8
CLK2-203ENST00000368361 CCDC27Q2M243 656 aa32.54■■■□□ 2.8
CLK2-203ENST00000368361 AMOTL2Q9Y2J4 779 aa32.54■■■□□ 2.8
CLK2-203ENST00000368361 DIAPH1O60610 1272 aaKnown RBP32.53■■■□□ 2.8
CLK2-203ENST00000368361 PLEKHF1Q96S99 279 aa32.53■■■□□ 2.8
CLK2-203ENST00000368361 POLKQ9UBT6 870 aa32.53■■■□□ 2.8
CLK2-203ENST00000368361 RIMS1Q86UR5 1692 aaKnown RBP32.52■■■□□ 2.8
CLK2-203ENST00000368361 MAP2P11137 1827 aaKnown RBP32.52■■■□□ 2.8
CLK2-203ENST00000368361 WDR63Q8IWG1 891 aa32.51■■■□□ 2.8
CLK2-203ENST00000368361 ZRANB1Q9UGI0 708 aa32.51■■■□□ 2.79
CLK2-203ENST00000368361 CEP170BQ9Y4F5 1589 aaPredicted RBP32.5■■■□□ 2.79
CLK2-203ENST00000368361 NCBP3Q53F19 620 aaKnown RBP32.5■■■□□ 2.79
CLK2-203ENST00000368361 TOPAZ1Q8N9V7 1692 aa32.49■■■□□ 2.79
CLK2-203ENST00000368361 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.49■■■□□ 2.79
CLK2-203ENST00000368361 DIP2AQ14689 1571 aa32.49■■■□□ 2.79
CLK2-203ENST00000368361 PPM1GO15355 546 aaPredicted RBP32.49■■■□□ 2.79
CLK2-203ENST00000368361 ZNF692Q9BU19 519 aaPredicted RBP32.48■■■□□ 2.79
CLK2-203ENST00000368361 NUTM2FA1L443 756 aa32.48■■■□□ 2.79
CLK2-203ENST00000368361 PTCH1Q13635 1447 aa32.47■■■□□ 2.79
CLK2-203ENST00000368361 BCAR3O75815 825 aa32.46■■■□□ 2.79
CLK2-203ENST00000368361 COG3Q96JB2 828 aa32.44■■■□□ 2.78
CLK2-203ENST00000368361 MAPK8IP3Q9UPT6 1336 aa32.43■■■□□ 2.78
CLK2-203ENST00000368361 EMILIN1Q9Y6C2 1016 aa32.43■■■□□ 2.78
CLK2-203ENST00000368361 TMPOP42166 694 aaKnown RBP32.42■■■□□ 2.78
CLK2-203ENST00000368361 ACEP12821 1306 aa32.42■■■□□ 2.78
CLK2-203ENST00000368361 AATKQ6ZMQ8 1374 aa32.41■■■□□ 2.78
CLK2-203ENST00000368361 NRKQ7Z2Y5 1582 aa32.41■■■□□ 2.78
CLK2-203ENST00000368361 PLEKHG3A1L390 1219 aa32.41■■■□□ 2.78
CLK2-203ENST00000368361 XRN1Q8IZH2 1706 aaKnown RBP32.4■■■□□ 2.78
CLK2-203ENST00000368361 LRRC7Q96NW7 1537 aa32.38■■■□□ 2.77
CLK2-203ENST00000368361 CDK12Q9NYV4 1490 aaPredicted RBP32.37■■■□□ 2.77
CLK2-203ENST00000368361 PNNQ9H307 717 aaKnown RBP32.36■■■□□ 2.77
CLK2-203ENST00000368361 TRIM35Q9UPQ4 493 aa32.36■■■□□ 2.77
CLK2-203ENST00000368361 TTC21BQ7Z4L5 1316 aa32.36■■■□□ 2.77
CLK2-203ENST00000368361 FCHSD2O94868 740 aa32.36■■■□□ 2.77
CLK2-203ENST00000368361 RRS1Q15050 365 aaKnown RBP32.35■■■□□ 2.77
CLK2-203ENST00000368361 ADAMTSL3P82987 1691 aa32.35■■■□□ 2.77
CLK2-203ENST00000368361 MYH16Q9H6N6 1097 aa32.35■■■□□ 2.77
CLK2-203ENST00000368361 USP6P35125 1406 aa32.35■■■□□ 2.77
CLK2-203ENST00000368361 RSPH6AQ9H0K4 717 aa32.34■■■□□ 2.77
CLK2-203ENST00000368361 KCNA6P17658 529 aa32.32■■■□□ 2.76
CLK2-203ENST00000368361 IL13P35225 146 aa32.32■■■□□ 2.76
CLK2-203ENST00000368361 RIPK4P57078 832 aa32.31■■■□□ 2.76
CLK2-203ENST00000368361 ZNF142P52746 1687 aaPredicted RBP32.31■■■□□ 2.76
CLK2-203ENST00000368361 PRKAR2BP31323 418 aa32.31■■■□□ 2.76
CLK2-203ENST00000368361 RARSP54136 660 aaKnown RBP32.31■■■□□ 2.76
CLK2-203ENST00000368361 RGPD8O14715 1765 aaPredicted RBP32.3■■■□□ 2.76
CLK2-203ENST00000368361 PIK3R4Q99570 1358 aa32.29■■■□□ 2.76
CLK2-203ENST00000368361 OVOS2A0A0J9YW53 1432 aa32.28■■■□□ 2.76
CLK2-203ENST00000368361 OVOS2Q6IE36 1432 aa32.28■■■□□ 2.76
CLK2-203ENST00000368361 HMOX1P09601 288 aa32.28■■■□□ 2.76
CLK2-203ENST00000368361 PMFBP1Q8TBY8 1022 aa32.28■■■□□ 2.76
CLK2-203ENST00000368361 TSR2Q969E8 191 aaKnown RBP32.27■■■□□ 2.76
CLK2-203ENST00000368361 FANCIQ9NVI1 1328 aa32.27■■■□□ 2.76
CLK2-203ENST00000368361 ANKLE2Q86XL3 938 aa32.26■■■□□ 2.76
CLK2-203ENST00000368361 SSH2Q76I76 1423 aa32.26■■■□□ 2.76
CLK2-203ENST00000368361 CANXP27824 592 aaKnown RBP32.24■■■□□ 2.75
CLK2-203ENST00000368361 PDE3AQ14432 1141 aa32.24■■■□□ 2.75
CLK2-203ENST00000368361 NEFMP07197 916 aa32.23■■■□□ 2.75
CLK2-203ENST00000368361 FRAT1Q92837 279 aaPredicted RBP32.22■■■□□ 2.75
CLK2-203ENST00000368361 PHACTR3Q96KR7 559 aa32.22■■■□□ 2.75
CLK2-203ENST00000368361 NALCNQ8IZF0 1738 aa32.22■■■□□ 2.75
CLK2-203ENST00000368361 IL16Q14005 1332 aa32.22■■■□□ 2.75
CLK2-203ENST00000368361 KDM2BQ8NHM5 1336 aa32.21■■■□□ 2.75
CLK2-203ENST00000368361 BCL2L13Q9BXK5 485 aa32.21■■■□□ 2.75
CLK2-203ENST00000368361 SETD1BQ9UPS6 1966 aaKnown RBP32.2■■■□□ 2.75
CLK2-203ENST00000368361 NGDNQ8NEJ9 315 aaKnown RBP32.19■■■□□ 2.74
CLK2-203ENST00000368361 CHD2O14647 1828 aaKnown RBP32.19■■■□□ 2.74
CLK2-203ENST00000368361 PANK1Q8TE04 598 aa32.18■■■□□ 2.74
CLK2-203ENST00000368361 DNAJC5Q9H3Z4 198 aa32.18■■■□□ 2.74
CLK2-203ENST00000368361 TTC21AQ8NDW8 1320 aa32.18■■■□□ 2.74
CLK2-203ENST00000368361 EXOSC9Q06265 439 aaKnown RBP32.17■■■□□ 2.74
CLK2-203ENST00000368361 USP31Q70CQ4 1352 aa32.17■■■□□ 2.74
CLK2-203ENST00000368361 ANKARQ7Z5J8 1434 aa32.17■■■□□ 2.74
CLK2-203ENST00000368361 NFE2L2Q16236 605 aa32.17■■■□□ 2.74
CLK2-203ENST00000368361 FMN2Q9NZ56 1722 aa32.16■■■□□ 2.74
CLK2-203ENST00000368361 CT47B1P0C2W7 299 aaPredicted RBP32.16■■■□□ 2.74
CLK2-203ENST00000368361 TCERG1O14776 1098 aaKnown RBP32.15■■■□□ 2.74
CLK2-203ENST00000368361 CENPQQ7L2Z9 268 aaPredicted RBP32.14■■■□□ 2.74
CLK2-203ENST00000368361 COG6Q9Y2V7 657 aa32.14■■■□□ 2.74
CLK2-203ENST00000368361 PEAK1Q9H792 1746 aa32.14■■■□□ 2.74
CLK2-203ENST00000368361 EIF4A2Q14240 407 aaKnown RBP32.12■■■□□ 2.73
CLK2-203ENST00000368361 SOX12O15370 315 aa32.12■■■□□ 2.73
CLK2-203ENST00000368361 SKAP1Q86WV1 359 aa32.12■■■□□ 2.73
CLK2-203ENST00000368361 TNNQ9UQP3 1299 aa32.11■■■□□ 2.73
CLK2-203ENST00000368361 PIK3C2AO00443 1686 aa32.09■■■□□ 2.73
CLK2-203ENST00000368361 RLBP1P12271 317 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms