RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 USP6P35125 1406 aa31.59■■■□□ 2.65
ECHDC1-203ENST00000368291 AFF2P51816 1311 aa31.59■■■□□ 2.65
ECHDC1-203ENST00000368291 PUS7Q96PZ0 661 aaKnown RBP31.58■■■□□ 2.65
ECHDC1-203ENST00000368291 CPSF1Q10570 1443 aaKnown RBP31.57■■■□□ 2.64
ECHDC1-203ENST00000368291 SSH2Q76I76 1423 aa31.57■■■□□ 2.64
ECHDC1-203ENST00000368291 MON2Q7Z3U7 1717 aa31.57■■■□□ 2.64
ECHDC1-203ENST00000368291 PLEKHG5O94827 1062 aa31.56■■■□□ 2.64
ECHDC1-203ENST00000368291 NGLY1Q96IV0 654 aa31.56■■■□□ 2.64
ECHDC1-203ENST00000368291 CD163L1Q9NR16 1453 aa31.55■■■□□ 2.64
ECHDC1-203ENST00000368291 BRD4O60885 1362 aaPredicted RBP31.55■■■□□ 2.64
ECHDC1-203ENST00000368291 PHRF1Q9P1Y6 1649 aaKnown RBP31.55■■■□□ 2.64
ECHDC1-203ENST00000368291 SLC24A1O60721 1099 aa31.55■■■□□ 2.64
ECHDC1-203ENST00000368291 NRKQ7Z2Y5 1582 aa31.54■■■□□ 2.64
ECHDC1-203ENST00000368291 ZNF772Q68DY9 489 aaPredicted RBP31.54■■■□□ 2.64
ECHDC1-203ENST00000368291 FNBP4Q8N3X1 1017 aaPredicted RBP31.52■■■□□ 2.64
ECHDC1-203ENST00000368291 ZNF692Q9BU19 519 aaPredicted RBP31.51■■■□□ 2.63
ECHDC1-203ENST00000368291 SLC12A5Q9H2X9 1139 aa31.51■■■□□ 2.63
ECHDC1-203ENST00000368291 PIK3C2AO00443 1686 aa31.5■■■□□ 2.63
ECHDC1-203ENST00000368291 TMF1P82094 1093 aa31.5■■■□□ 2.63
ECHDC1-203ENST00000368291 NUTM2GQ5VZR2 741 aa31.5■■■□□ 2.63
ECHDC1-203ENST00000368291 HAP1P54257 671 aaPredicted RBP31.49■■■□□ 2.63
ECHDC1-203ENST00000368291 ABTB2Q8N961 1025 aa31.49■■■□□ 2.63
ECHDC1-203ENST00000368291 PLCH1Q4KWH8 1693 aa31.48■■■□□ 2.63
ECHDC1-203ENST00000368291 TMC1Q8TDI8 760 aa31.47■■■□□ 2.63
ECHDC1-203ENST00000368291 SLIT2O94813 1529 aa31.47■■■□□ 2.63
ECHDC1-203ENST00000368291 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.47■■■□□ 2.63
ECHDC1-203ENST00000368291 KTN1Q86UP2 1357 aaKnown RBP31.46■■■□□ 2.63
ECHDC1-203ENST00000368291 BCL9LQ86UU0 1499 aa31.46■■■□□ 2.63
ECHDC1-203ENST00000368291 TTC21BQ7Z4L5 1316 aa31.44■■■□□ 2.62
ECHDC1-203ENST00000368291 HSPA5P11021 654 aaKnown RBP31.44■■■□□ 2.62
ECHDC1-203ENST00000368291 EIF4G2P78344 907 aaKnown RBP eCLIP31.44■■■□□ 2.62
ECHDC1-203ENST00000368291 USP21Q9UK80 565 aa31.44■■■□□ 2.62
ECHDC1-203ENST00000368291 NWD2Q9ULI1 1742 aa31.44■■■□□ 2.62
ECHDC1-203ENST00000368291 USP19O94966 1318 aa31.44■■■□□ 2.62
ECHDC1-203ENST00000368291 NINLQ9Y2I6 1382 aa31.43■■■□□ 2.62
ECHDC1-203ENST00000368291 A0A1W2PP64 1363 aa31.42■■■□□ 2.62
ECHDC1-203ENST00000368291 MYOM1P52179 1685 aa31.42■■■□□ 2.62
ECHDC1-203ENST00000368291 FAM83GA6ND36 823 aa31.42■■■□□ 2.62
ECHDC1-203ENST00000368291 QTRT2Q9H974 415 aaKnown RBP31.42■■■□□ 2.62
ECHDC1-203ENST00000368291 COL14A1Q05707 1796 aaKnown RBP31.41■■■□□ 2.62
ECHDC1-203ENST00000368291 NLRP13Q86W25 1043 aa31.41■■■□□ 2.62
ECHDC1-203ENST00000368291 TTC21AQ8NDW8 1320 aa31.39■■■□□ 2.62
ECHDC1-203ENST00000368291 ATRNO75882 1429 aa31.39■■■□□ 2.61
ECHDC1-203ENST00000368291 SLIT3O75094 1523 aa31.38■■■□□ 2.61
ECHDC1-203ENST00000368291 HDGFL2Q7Z4V5 671 aaPredicted RBP31.38■■■□□ 2.61
ECHDC1-203ENST00000368291 NRAPQ86VF7 1730 aa31.38■■■□□ 2.61
ECHDC1-203ENST00000368291 NLRP6P59044 892 aa31.37■■■□□ 2.61
ECHDC1-203ENST00000368291 TERF2IPQ9NYB0 399 aa31.37■■■□□ 2.61
ECHDC1-203ENST00000368291 CDCA8Q53HL2 280 aa31.36■■■□□ 2.61
ECHDC1-203ENST00000368291 USP54Q70EL1 1684 aa31.36■■■□□ 2.61
ECHDC1-203ENST00000368291 EDC4Q6P2E9 1401 aaKnown RBP31.35■■■□□ 2.61
ECHDC1-203ENST00000368291 RXRBP28702 533 aa31.34■■■□□ 2.61
ECHDC1-203ENST00000368291 UNC5CLQ8IV45 518 aa31.34■■■□□ 2.61
ECHDC1-203ENST00000368291 TRPC5Q9UL62 973 aaPredicted RBP31.34■■■□□ 2.61
ECHDC1-203ENST00000368291 KIAA0232Q92628 1395 aa31.34■■■□□ 2.61
ECHDC1-203ENST00000368291 GCP02774 474 aa31.33■■■□□ 2.61
ECHDC1-203ENST00000368291 ANKRD36BQ8N2N9 1353 aa31.32■■■□□ 2.6
ECHDC1-203ENST00000368291 ZC3H6P61129 1189 aaKnown RBP31.32■■■□□ 2.6
ECHDC1-203ENST00000368291 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.32■■■□□ 2.65e-7■■■□□ 18.9
ECHDC1-203ENST00000368291 RBM6P78332 1123 aaKnown RBP31.31■■■□□ 2.6
ECHDC1-203ENST00000368291 PRDM11Q9NQV5 511 aa31.3■■■□□ 2.6
ECHDC1-203ENST00000368291 CPDO75976 1380 aa31.3■■■□□ 2.6
ECHDC1-203ENST00000368291 ZRANB1Q9UGI0 708 aa31.3■■■□□ 2.6
ECHDC1-203ENST00000368291 CDK12Q9NYV4 1490 aaPredicted RBP31.29■■■□□ 2.6
ECHDC1-203ENST00000368291 LMO7Q8WWI1 1683 aa31.29■■■□□ 2.6
ECHDC1-203ENST00000368291 USP31Q70CQ4 1352 aa31.29■■■□□ 2.6
ECHDC1-203ENST00000368291 NME9Q86XW9 330 aa31.29■■■□□ 2.6
ECHDC1-203ENST00000368291 SOCS7O14512 581 aa31.28■■■□□ 2.6
ECHDC1-203ENST00000368291 CHRNA2Q15822 529 aa31.28■■■□□ 2.6
ECHDC1-203ENST00000368291 BTG4Q9NY30 223 aa31.28■■■□□ 2.6
ECHDC1-203ENST00000368291 GLI3P10071 1580 aa31.27■■■□□ 2.6
ECHDC1-203ENST00000368291 GJD4Q96KN9 370 aaPredicted RBP31.25■■■□□ 2.59
ECHDC1-203ENST00000368291 COL18A1P39060 1754 aa31.25■■■□□ 2.59
ECHDC1-203ENST00000368291 NFAT5O94916 1531 aa31.24■■■□□ 2.59
ECHDC1-203ENST00000368291 C11orf95C9JLR9 678 aaPredicted RBP31.24■■■□□ 2.59
ECHDC1-203ENST00000368291 RGS12O14924 1447 aa31.24■■■□□ 2.59
ECHDC1-203ENST00000368291 VPS72Q15906 364 aa31.23■■■□□ 2.59
ECHDC1-203ENST00000368291 CAMTA1Q9Y6Y1 1673 aa31.23■■■□□ 2.59
ECHDC1-203ENST00000368291 OVOS2A0A0J9YW53 1432 aa31.21■■■□□ 2.59
ECHDC1-203ENST00000368291 OVOS2Q6IE36 1432 aa31.21■■■□□ 2.59
ECHDC1-203ENST00000368291 RGPD5Q99666 1765 aa31.2■■■□□ 2.58
ECHDC1-203ENST00000368291 KCNH5Q8NCM2 988 aa31.19■■■□□ 2.58
ECHDC1-203ENST00000368291 CARD14Q9BXL6 1004 aa31.18■■■□□ 2.58
ECHDC1-203ENST00000368291 KIF20BQ96Q89 1820 aa31.18■■■□□ 2.58
ECHDC1-203ENST00000368291 POLR3GLQ9BT43 218 aa31.17■■■□□ 2.58
ECHDC1-203ENST00000368291 LTN1O94822 1766 aa31.17■■■□□ 2.58
ECHDC1-203ENST00000368291 SOX12O15370 315 aa31.16■■■□□ 2.58
ECHDC1-203ENST00000368291 ARHGEF25Q86VW2 580 aa31.16■■■□□ 2.58
ECHDC1-203ENST00000368291 AATKQ6ZMQ8 1374 aa31.15■■■□□ 2.58
ECHDC1-203ENST00000368291 FYB1O15117 783 aa31.13■■■□□ 2.57
ECHDC1-203ENST00000368291 BRWD3Q6RI45 1802 aa31.13■■■□□ 2.57
ECHDC1-203ENST00000368291 ZBTB7CA1YPR0 619 aa31.12■■■□□ 2.57
ECHDC1-203ENST00000368291 CCDC9Q9Y3X0 531 aaKnown RBP31.12■■■□□ 2.57
ECHDC1-203ENST00000368291 SPATA31A5Q5VU36 1347 aa31.11■■■□□ 2.57
ECHDC1-203ENST00000368291 SPATA31A7Q8IWB4 1347 aa31.11■■■□□ 2.57
ECHDC1-203ENST00000368291 NSD3Q9BZ95 1437 aa31.11■■■□□ 2.57
ECHDC1-203ENST00000368291 STRN4Q9NRL3 753 aa31.11■■■□□ 2.57
ECHDC1-203ENST00000368291 COL5A2P05997 1499 aaPredicted RBP31.11■■■□□ 2.57
ECHDC1-203ENST00000368291 AXIN2Q9Y2T1 843 aa31.09■■■□□ 2.57
ECHDC1-203ENST00000368291 KIF7Q2M1P5 1343 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms