RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 HIC1Q14526 733 aa10.05□□□□□ -0.8
ECHDC1-202ENST00000368289 C6orf132Q5T0Z8 1188 aa10.05□□□□□ -0.8
ECHDC1-202ENST00000368289 QTRT2Q9H974 415 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-202ENST00000368289 TROQ12816 1431 aaPredicted RBP10.05□□□□□ -0.8
ECHDC1-202ENST00000368289 FGD6Q6ZV73 1430 aa10.05□□□□□ -0.8
ECHDC1-202ENST00000368289 SPAG9O60271 1321 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-202ENST00000368289 ZMYND10O75800 440 aa10.04□□□□□ -0.8
ECHDC1-202ENST00000368289 HNRNPMP52272 730 aaKnown RBP eCLIP10.04□□□□□ -0.83e-8■■■■■ 29
ECHDC1-202ENST00000368289 BCL2L12Q9HB09 334 aa10.04□□□□□ -0.8
ECHDC1-202ENST00000368289 ATAD2Q6PL18 1390 aa10.03□□□□□ -0.8
ECHDC1-202ENST00000368289 PTPREP23469 700 aa10.03□□□□□ -0.8
ECHDC1-202ENST00000368289 YY1P25490 414 aa10.03□□□□□ -0.8
ECHDC1-202ENST00000368289 PRIM1P49642 420 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-202ENST00000368289 BARGINQ6ZT62 677 aa10.03□□□□□ -0.8
ECHDC1-202ENST00000368289 KRI1Q8N9T8 703 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-202ENST00000368289 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
ECHDC1-202ENST00000368289 GNPATO15228 680 aa10.02□□□□□ -0.81
ECHDC1-202ENST00000368289 PTGDRQ13258 359 aa10.02□□□□□ -0.81
ECHDC1-202ENST00000368289 NCOA2Q15596 1464 aa10.02□□□□□ -0.81
ECHDC1-202ENST00000368289 DIP2AQ14689 1571 aa10.01□□□□□ -0.81
ECHDC1-202ENST00000368289 TSR1Q2NL82 804 aaKnown RBP10.01□□□□□ -0.81
ECHDC1-202ENST00000368289 VARS2Q5ST30 1063 aaKnown RBP10.01□□□□□ -0.81
ECHDC1-202ENST00000368289 MARVELD3Q96A59 401 aa10.01□□□□□ -0.81
ECHDC1-202ENST00000368289 LRRC9Q6ZRR7 1453 aa10.01□□□□□ -0.81
ECHDC1-202ENST00000368289 SCAF11Q99590 1463 aaKnown RBP10.01□□□□□ -0.81
ECHDC1-202ENST00000368289 INO80Q9ULG1 1556 aaPredicted RBP10.01□□□□□ -0.81
ECHDC1-202ENST00000368289 PREX2Q70Z35 1606 aa10□□□□□ -0.81
ECHDC1-202ENST00000368289 ARHGAP23Q9P227 1491 aa10□□□□□ -0.81
ECHDC1-202ENST00000368289 FAM205CA6NFA0 338 aa10□□□□□ -0.81
ECHDC1-202ENST00000368289 ZEB1P37275 1124 aaPredicted RBP10□□□□□ -0.81
ECHDC1-202ENST00000368289 DEFB132Q7Z7B7 95 aa10□□□□□ -0.81
ECHDC1-202ENST00000368289 PCGF6Q9BYE7 350 aa10□□□□□ -0.81
ECHDC1-202ENST00000368289 SHPRHQ149N8 1683 aa9.99□□□□□ -0.81
ECHDC1-202ENST00000368289 BCL9LQ86UU0 1499 aa9.99□□□□□ -0.81
ECHDC1-202ENST00000368289 SYCP2Q9BX26 1530 aa9.99□□□□□ -0.81
ECHDC1-202ENST00000368289 KCNA6P17658 529 aa9.99□□□□□ -0.81
ECHDC1-202ENST00000368289 PROSER2Q86WR7 435 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-202ENST00000368289 CDHR5Q9HBB8 845 aa9.99□□□□□ -0.81
ECHDC1-202ENST00000368289 GPR37O15354 613 aa9.98□□□□□ -0.81
ECHDC1-202ENST00000368289 PRDM15P57071 1507 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 PPP1R3GB7ZBB8 358 aa9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 PBX2P40425 430 aa9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 TXNDC2Q86VQ3 553 aa9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 NPDC1Q9NQX5 325 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 RBM27Q9P2N5 1060 aaKnown RBP9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 MINK1Q8N4C8 1332 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 TIAM1Q13009 1591 aa9.97□□□□□ -0.81
ECHDC1-202ENST00000368289 AHDC1Q5TGY3 1603 aaPredicted RBP9.96□□□□□ -0.82
ECHDC1-202ENST00000368289 ARHGAP33O14559 1287 aa9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 MAP2K5Q13163 448 aa9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 CCDC125Q86Z20 511 aa9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 AK7Q96M32 723 aa9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 C8orf37Q96NL8 207 aa9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 HS3ST6Q96QI5 342 aa9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 ZNF777Q9ULD5 760 aaPredicted RBP9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 DHX29Q7Z478 1369 aaKnown RBP9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 SLIT1O75093 1534 aa9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 NHSL1Q5SYE7 1610 aa9.95□□□□□ -0.82
ECHDC1-202ENST00000368289 MAST1Q9Y2H9 1570 aa9.94□□□□□ -0.82
ECHDC1-202ENST00000368289 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
ECHDC1-202ENST00000368289 ATP1B4Q9UN42 357 aaPredicted RBP9.94□□□□□ -0.82
ECHDC1-202ENST00000368289 TET3O43151 1660 aa9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 WASHC2CQ9Y4E1 1318 aa9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 KIF3BO15066 747 aa9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 PRSS12P56730 875 aa9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 SLC26A8Q96RN1 970 aa9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 KCNK17Q96T54 332 aa9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 CDK11AQ9UQ88 783 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 CDC42BPAQ5VT25 1732 aa9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 UBR1Q8IWV7 1749 aa9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 LRRIQ1Q96JM4 1722 aa9.93□□□□□ -0.82
ECHDC1-202ENST00000368289 NWD1Q149M9 1564 aa9.92□□□□□ -0.82
ECHDC1-202ENST00000368289 EEA1Q15075 1411 aa9.92□□□□□ -0.82
ECHDC1-202ENST00000368289 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
ECHDC1-202ENST00000368289 ONECUT3O60422 494 aaPredicted RBP9.92□□□□□ -0.82
ECHDC1-202ENST00000368289 LCE2DQ5TA82 110 aaPredicted RBP9.92□□□□□ -0.82
ECHDC1-202ENST00000368289 KIAA1107Q9UPP5 1409 aa9.91□□□□□ -0.82
ECHDC1-202ENST00000368289 MSH6P52701 1360 aa9.91□□□□□ -0.82
ECHDC1-202ENST00000368289 IRF6O14896 467 aa9.91□□□□□ -0.82
ECHDC1-202ENST00000368289 CDCA7LQ96GN5 454 aa9.91□□□□□ -0.82
ECHDC1-202ENST00000368289 GPATCH8Q9UKJ3 1502 aaKnown RBP9.91□□□□□ -0.82
ECHDC1-202ENST00000368289 ERVK-7P63135 1459 aa9.91□□□□□ -0.82
ECHDC1-202ENST00000368289 COL9A1P20849 921 aa9.9□□□□□ -0.82
ECHDC1-202ENST00000368289 BRINP3Q76B58 766 aa9.9□□□□□ -0.82
ECHDC1-202ENST00000368289 CLIP1P30622 1438 aa9.9□□□□□ -0.83
ECHDC1-202ENST00000368289 GOLGB1Q14789 3259 aaKnown RBP9.89□□□□□ -0.83
ECHDC1-202ENST00000368289 ZNF644Q9H582 1327 aaPredicted RBP9.89□□□□□ -0.83
ECHDC1-202ENST00000368289 PADI6Q6TGC4 694 aa9.89□□□□□ -0.83
ECHDC1-202ENST00000368289 PACS2Q86VP3 889 aa9.89□□□□□ -0.83
ECHDC1-202ENST00000368289 NGLY1Q96IV0 654 aa9.89□□□□□ -0.83
ECHDC1-202ENST00000368289 ATRNO75882 1429 aa9.89□□□□□ -0.83
ECHDC1-202ENST00000368289 BLMP54132 1417 aaPredicted RBP9.89□□□□□ -0.83
ECHDC1-202ENST00000368289 SETD5Q9C0A6 1442 aa9.89□□□□□ -0.83
ECHDC1-202ENST00000368289 ABCC3O15438 1527 aa9.88□□□□□ -0.83
ECHDC1-202ENST00000368289 KDM5AP29375 1690 aaKnown RBP9.88□□□□□ -0.83
ECHDC1-202ENST00000368289 NKTRP30414 1462 aaKnown RBP9.88□□□□□ -0.83
ECHDC1-202ENST00000368289 MBD5Q9P267 1494 aa9.88□□□□□ -0.83
ECHDC1-202ENST00000368289 OATP04181 439 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms