RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 TRIM27P14373 513 aa17.66■□□□□ 0.42
CCT3-206ENST00000368262 IL16Q14005 1332 aa17.66■□□□□ 0.42
CCT3-206ENST00000368262 TNPO1Q92973 898 aaKnown RBP17.65■□□□□ 0.42
CCT3-206ENST00000368262 GBP4Q96PP9 640 aa17.65■□□□□ 0.42
CCT3-206ENST00000368262 ARHGEF28Q8N1W1 1705 aaKnown RBP17.65■□□□□ 0.42
CCT3-206ENST00000368262 CD109Q6YHK3 1445 aa17.65■□□□□ 0.42
CCT3-206ENST00000368262 ATF7IPQ6VMQ6 1270 aa17.64■□□□□ 0.41
CCT3-206ENST00000368262 TPM2P07951 284 aa17.64■□□□□ 0.41
CCT3-206ENST00000368262 NUCB1Q02818 461 aa17.64■□□□□ 0.41
CCT3-206ENST00000368262 SLC12A5Q9H2X9 1139 aa17.64■□□□□ 0.41
CCT3-206ENST00000368262 ZBTB40Q9NUA8 1239 aa17.64■□□□□ 0.41
CCT3-206ENST00000368262 MED14O60244 1454 aa17.63■□□□□ 0.41
CCT3-206ENST00000368262 ANKRD36BQ8N2N9 1353 aa17.63■□□□□ 0.41
CCT3-206ENST00000368262 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
CCT3-206ENST00000368262 CLEC17AQ6ZS10 378 aa17.63■□□□□ 0.41
CCT3-206ENST00000368262 GAS2L3Q86XJ1 694 aa17.63■□□□□ 0.41
CCT3-206ENST00000368262 SMC4Q9NTJ3 1288 aa17.63■□□□□ 0.41
CCT3-206ENST00000368262 TULP4Q9NRJ4 1543 aa17.63■□□□□ 0.41
CCT3-206ENST00000368262 KIF16BQ96L93 1317 aa17.62■□□□□ 0.41
CCT3-206ENST00000368262 AFAP1Q8N556 730 aa17.62■□□□□ 0.41
CCT3-206ENST00000368262 SSH1Q8WYL5 1049 aa17.62■□□□□ 0.41
CCT3-206ENST00000368262 PKNOX2Q96KN3 472 aa17.62■□□□□ 0.41
CCT3-206ENST00000368262 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
CCT3-206ENST00000368262 PPP1R9BQ96SB3 815 aa17.61■□□□□ 0.41
CCT3-206ENST00000368262 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
CCT3-206ENST00000368262 GLI2P10070 1586 aa17.61■□□□□ 0.41
CCT3-206ENST00000368262 TNNT2P45379 298 aaPredicted RBP17.6■□□□□ 0.41
CCT3-206ENST00000368262 BMP2KLQ5H9B9 411 aa17.6■□□□□ 0.41
CCT3-206ENST00000368262 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
CCT3-206ENST00000368262 KIF2CQ99661 725 aa17.6■□□□□ 0.41
CCT3-206ENST00000368262 ITPRIPQ8IWB1 547 aa17.6■□□□□ 0.41
CCT3-206ENST00000368262 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
CCT3-206ENST00000368262 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
CCT3-206ENST00000368262 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
CCT3-206ENST00000368262 CCDC173Q0VFZ6 552 aa17.59■□□□□ 0.41
CCT3-206ENST00000368262 TRIM44Q96DX7 344 aaPredicted RBP17.59■□□□□ 0.41
CCT3-206ENST00000368262 TRIM35Q9UPQ4 493 aa17.59■□□□□ 0.41
CCT3-206ENST00000368262 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.4
CCT3-206ENST00000368262 CDC42BPGQ6DT37 1551 aa17.58■□□□□ 0.4
CCT3-206ENST00000368262 HSP90AB1P08238 724 aaKnown RBP17.58■□□□□ 0.4
CCT3-206ENST00000368262 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.4
CCT3-206ENST00000368262 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
CCT3-206ENST00000368262 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
CCT3-206ENST00000368262 KIF3BO15066 747 aa17.57■□□□□ 0.4
CCT3-206ENST00000368262 CHD1LQ86WJ1 897 aa17.57■□□□□ 0.4
CCT3-206ENST00000368262 IPO8O15397 1037 aaKnown RBP17.56■□□□□ 0.4
CCT3-206ENST00000368262 BRPF1P55201 1214 aaPredicted RBP17.56■□□□□ 0.4
CCT3-206ENST00000368262 ALDH1L2Q3SY69 923 aa17.56■□□□□ 0.4
CCT3-206ENST00000368262 PIK3R4Q99570 1358 aa17.56■□□□□ 0.4
CCT3-206ENST00000368262 PPIP5K1Q6PFW1 1433 aa17.55■□□□□ 0.4
CCT3-206ENST00000368262 K7ELQ4 463 aaPredicted RBP17.55■□□□□ 0.4
CCT3-206ENST00000368262 PIK3C2BO00750 1634 aa17.55■□□□□ 0.4
CCT3-206ENST00000368262 TERF1P54274 439 aa17.54■□□□□ 0.4
CCT3-206ENST00000368262 TRAK1Q9UPV9 953 aa17.54■□□□□ 0.4
CCT3-206ENST00000368262 RPGRIP1LQ68CZ1 1315 aa17.54■□□□□ 0.4
CCT3-206ENST00000368262 VSIG10Q8N0Z9 540 aa17.54■□□□□ 0.4
CCT3-206ENST00000368262 KLHL40Q2TBA0 621 aa17.53■□□□□ 0.4
CCT3-206ENST00000368262 ZMYND15Q9H091 742 aa17.53■□□□□ 0.4
CCT3-206ENST00000368262 CLTCQ00610 1675 aaKnown RBP17.53■□□□□ 0.4
CCT3-206ENST00000368262 ZSCAN30Q86W11 494 aa17.52■□□□□ 0.4
CCT3-206ENST00000368262 GCC1Q96CN9 775 aa17.52■□□□□ 0.4
CCT3-206ENST00000368262 EVC2Q86UK5 1308 aa17.52■□□□□ 0.4
CCT3-206ENST00000368262 PTCH1Q13635 1447 aa17.52■□□□□ 0.4
CCT3-206ENST00000368262 CAMSAP1Q5T5Y3 1602 aa17.52■□□□□ 0.39
CCT3-206ENST00000368262 ZNF428Q96B54 188 aa17.52■□□□□ 0.39
CCT3-206ENST00000368262 LNPKQ9C0E8 428 aa17.52■□□□□ 0.39
CCT3-206ENST00000368262 OFD1O75665 1012 aa17.51■□□□□ 0.39
CCT3-206ENST00000368262 CD2BP2O95400 341 aaKnown RBP17.51■□□□□ 0.39
CCT3-206ENST00000368262 HECW2Q9P2P5 1572 aa17.51■□□□□ 0.39
CCT3-206ENST00000368262 GOLGA6L22H0YM25 854 aa17.5■□□□□ 0.39
CCT3-206ENST00000368262 NASPP49321 788 aaPredicted RBP17.5■□□□□ 0.39
CCT3-206ENST00000368262 ZNF445P59923 1031 aa17.5■□□□□ 0.39
CCT3-206ENST00000368262 HS1BP3Q53T59 392 aa17.5■□□□□ 0.39
CCT3-206ENST00000368262 PDCL3Q9H2J4 239 aa17.5■□□□□ 0.39
CCT3-206ENST00000368262 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
CCT3-206ENST00000368262 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
CCT3-206ENST00000368262 SSFA2P28290 1259 aa17.48■□□□□ 0.39
CCT3-206ENST00000368262 NPATQ14207 1427 aa17.48■□□□□ 0.39
CCT3-206ENST00000368262 PNPLA6Q8IY17 1366 aa17.48■□□□□ 0.39
CCT3-206ENST00000368262 BAG4O95429 457 aaKnown RBP17.48■□□□□ 0.39
CCT3-206ENST00000368262 TBC1D9Q6ZT07 1266 aa17.48■□□□□ 0.39
CCT3-206ENST00000368262 GAS2L2Q8NHY3 880 aa17.48■□□□□ 0.39
CCT3-206ENST00000368262 NEXMIFQ5QGS0 1516 aa17.48■□□□□ 0.39
CCT3-206ENST00000368262 AK9Q5TCS8 1911 aa17.47■□□□□ 0.39
CCT3-206ENST00000368262 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
CCT3-206ENST00000368262 A0A1W2PP64 1363 aa17.47■□□□□ 0.39
CCT3-206ENST00000368262 FRMPD1Q5SYB0 1578 aa17.47■□□□□ 0.39
CCT3-206ENST00000368262 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
CCT3-206ENST00000368262 KIAA1211Q6ZU35 1233 aa17.47■□□□□ 0.39
CCT3-206ENST00000368262 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
CCT3-206ENST00000368262 ZBTB7BO15156 539 aaPredicted RBP17.46■□□□□ 0.39
CCT3-206ENST00000368262 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
CCT3-206ENST00000368262 ZFYVE9O95405 1425 aa17.45■□□□□ 0.38
CCT3-206ENST00000368262 CDC45O75419 566 aa17.45■□□□□ 0.38
CCT3-206ENST00000368262 CFAP65Q6ZU64 1925 aaKnown RBP17.44■□□□□ 0.38
CCT3-206ENST00000368262 FAM135BQ49AJ0 1406 aa17.44■□□□□ 0.38
CCT3-206ENST00000368262 YEATS2Q9ULM3 1422 aa17.44■□□□□ 0.38
CCT3-206ENST00000368262 RIPK4P57078 832 aa17.44■□□□□ 0.38
CCT3-206ENST00000368262 ANP32BQ92688 251 aaKnown RBP17.44■□□□□ 0.38
CCT3-206ENST00000368262 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms