RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 WASHC2AQ641Q2 1341 aa17.71■□□□□ 0.43
LMX1A-203ENST00000367893 ARHGEF10O15013 1369 aa17.71■□□□□ 0.43
LMX1A-203ENST00000367893 EP400Q96L91 3159 aa17.71■□□□□ 0.43
LMX1A-203ENST00000367893 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
LMX1A-203ENST00000367893 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
LMX1A-203ENST00000367893 CCDC7Q96M83 1385 aa17.7■□□□□ 0.42
LMX1A-203ENST00000367893 MARF1Q9Y4F3 1742 aaKnown RBP17.7■□□□□ 0.42
LMX1A-203ENST00000367893 EVC2Q86UK5 1308 aa17.69■□□□□ 0.42
LMX1A-203ENST00000367893 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
LMX1A-203ENST00000367893 CDCA8Q53HL2 280 aa17.69■□□□□ 0.42
LMX1A-203ENST00000367893 ATP7BP35670 1465 aa17.68■□□□□ 0.42
LMX1A-203ENST00000367893 GLI3P10071 1580 aa17.67■□□□□ 0.42
LMX1A-203ENST00000367893 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.67■□□□□ 0.42
LMX1A-203ENST00000367893 TRPM3Q9HCF6 1732 aaPredicted RBP17.67■□□□□ 0.42
LMX1A-203ENST00000367893 LMOD2Q6P5Q4 547 aa17.66■□□□□ 0.42
LMX1A-203ENST00000367893 MYOM1P52179 1685 aa17.65■□□□□ 0.42
LMX1A-203ENST00000367893 FAM83GA6ND36 823 aa17.65■□□□□ 0.42
LMX1A-203ENST00000367893 VPS72Q15906 364 aa17.65■□□□□ 0.42
LMX1A-203ENST00000367893 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
LMX1A-203ENST00000367893 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
LMX1A-203ENST00000367893 ABCA3Q99758 1704 aa17.65■□□□□ 0.42
LMX1A-203ENST00000367893 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.41
LMX1A-203ENST00000367893 PLEKHG5O94827 1062 aa17.64■□□□□ 0.41
LMX1A-203ENST00000367893 ALS2Q96Q42 1657 aa17.63■□□□□ 0.41
LMX1A-203ENST00000367893 HAP1P54257 671 aaPredicted RBP17.63■□□□□ 0.41
LMX1A-203ENST00000367893 NGDNQ8NEJ9 315 aaKnown RBP17.62■□□□□ 0.41
LMX1A-203ENST00000367893 TOPAZ1Q8N9V7 1692 aa17.62■□□□□ 0.41
LMX1A-203ENST00000367893 ONECUT3O60422 494 aaPredicted RBP17.61■□□□□ 0.41
LMX1A-203ENST00000367893 CABP2Q9NPB3 220 aa17.61■□□□□ 0.41
LMX1A-203ENST00000367893 POLR3AO14802 1390 aaPredicted RBP17.6■□□□□ 0.41
LMX1A-203ENST00000367893 ITSN1Q15811 1721 aa17.6■□□□□ 0.41
LMX1A-203ENST00000367893 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
LMX1A-203ENST00000367893 NINLQ9Y2I6 1382 aa17.6■□□□□ 0.41
LMX1A-203ENST00000367893 PLCH1Q4KWH8 1693 aa17.59■□□□□ 0.41
LMX1A-203ENST00000367893 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.41
LMX1A-203ENST00000367893 PLEKHG3A1L390 1219 aa17.58■□□□□ 0.4
LMX1A-203ENST00000367893 SEPT12Q8IYM1 358 aa17.58■□□□□ 0.4
LMX1A-203ENST00000367893 CCDC61Q9Y6R9 512 aa17.57■□□□□ 0.4
LMX1A-203ENST00000367893 ACEP12821 1306 aa17.57■□□□□ 0.4
LMX1A-203ENST00000367893 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
LMX1A-203ENST00000367893 BTG4Q9NY30 223 aa17.56■□□□□ 0.4
LMX1A-203ENST00000367893 CRYBG1Q9Y4K1 1723 aa17.56■□□□□ 0.4
LMX1A-203ENST00000367893 CCDC125Q86Z20 511 aa17.55■□□□□ 0.4
LMX1A-203ENST00000367893 POLR3GLQ9BT43 218 aa17.55■□□□□ 0.4
LMX1A-203ENST00000367893 NRAPQ86VF7 1730 aa17.55■□□□□ 0.4
LMX1A-203ENST00000367893 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
LMX1A-203ENST00000367893 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
LMX1A-203ENST00000367893 CD163L1Q9NR16 1453 aa17.53■□□□□ 0.4
LMX1A-203ENST00000367893 SLC12A5Q9H2X9 1139 aa17.53■□□□□ 0.4
LMX1A-203ENST00000367893 CCDC9Q9Y3X0 531 aaKnown RBP17.53■□□□□ 0.4
LMX1A-203ENST00000367893 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
LMX1A-203ENST00000367893 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
LMX1A-203ENST00000367893 BLMP54132 1417 aaPredicted RBP17.52■□□□□ 0.4
LMX1A-203ENST00000367893 ANKRD36BQ8N2N9 1353 aa17.52■□□□□ 0.39
LMX1A-203ENST00000367893 KIAA0232Q92628 1395 aa17.52■□□□□ 0.39
LMX1A-203ENST00000367893 PRDM11Q9NQV5 511 aa17.51■□□□□ 0.39
LMX1A-203ENST00000367893 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
LMX1A-203ENST00000367893 CPSF1Q10570 1443 aaKnown RBP17.51■□□□□ 0.39
LMX1A-203ENST00000367893 SPATA31A5Q5VU36 1347 aa17.51■□□□□ 0.39
LMX1A-203ENST00000367893 SPATA31A7Q8IWB4 1347 aa17.51■□□□□ 0.39
LMX1A-203ENST00000367893 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
LMX1A-203ENST00000367893 NUTM2GQ5VZR2 741 aa17.5■□□□□ 0.39
LMX1A-203ENST00000367893 MON2Q7Z3U7 1717 aa17.5■□□□□ 0.39
LMX1A-203ENST00000367893 PER1O15534 1290 aaPredicted RBP17.49■□□□□ 0.39
LMX1A-203ENST00000367893 KRT27Q7Z3Y8 459 aa17.49■□□□□ 0.39
LMX1A-203ENST00000367893 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
LMX1A-203ENST00000367893 PANK3Q9H999 370 aa17.49■□□□□ 0.39
LMX1A-203ENST00000367893 USP19O94966 1318 aa17.49■□□□□ 0.39
LMX1A-203ENST00000367893 CHRNA2Q15822 529 aa17.48■□□□□ 0.39
LMX1A-203ENST00000367893 A0A1W2PP64 1363 aa17.48■□□□□ 0.39
LMX1A-203ENST00000367893 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
LMX1A-203ENST00000367893 BRWD3Q6RI45 1802 aa17.47■□□□□ 0.39
LMX1A-203ENST00000367893 PHRF1Q9P1Y6 1649 aaKnown RBP17.47■□□□□ 0.39
LMX1A-203ENST00000367893 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
LMX1A-203ENST00000367893 DEFB132Q7Z7B7 95 aa17.46■□□□□ 0.38
LMX1A-203ENST00000367893 ABTB2Q8N961 1025 aa17.46■□□□□ 0.38
LMX1A-203ENST00000367893 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.38
LMX1A-203ENST00000367893 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.38
LMX1A-203ENST00000367893 SPATA31A1Q5TZJ5 1347 aa17.45■□□□□ 0.38
LMX1A-203ENST00000367893 CPDO75976 1380 aa17.45■□□□□ 0.38
LMX1A-203ENST00000367893 SSH2Q76I76 1423 aa17.45■□□□□ 0.38
LMX1A-203ENST00000367893 NRKQ7Z2Y5 1582 aa17.45■□□□□ 0.38
LMX1A-203ENST00000367893 HDGFL2Q7Z4V5 671 aaPredicted RBP17.45■□□□□ 0.38
LMX1A-203ENST00000367893 BRD4O60885 1362 aaPredicted RBP17.44■□□□□ 0.38
LMX1A-203ENST00000367893 THSD7AQ9UPZ6 1657 aa17.44■□□□□ 0.38
LMX1A-203ENST00000367893 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
LMX1A-203ENST00000367893 USP6P35125 1406 aa17.43■□□□□ 0.38
LMX1A-203ENST00000367893 DIEXFQ68CQ4 756 aaKnown RBP17.43■□□□□ 0.38
LMX1A-203ENST00000367893 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
LMX1A-203ENST00000367893 EDC4Q6P2E9 1401 aaKnown RBP17.42■□□□□ 0.38
LMX1A-203ENST00000367893 NSD3Q9BZ95 1437 aa17.42■□□□□ 0.38
LMX1A-203ENST00000367893 KTN1Q86UP2 1357 aaKnown RBP17.42■□□□□ 0.38
LMX1A-203ENST00000367893 NPC1L1Q9UHC9 1359 aa17.42■□□□□ 0.38
LMX1A-203ENST00000367893 A0A0G2JS52 829 aa17.42■□□□□ 0.38
LMX1A-203ENST00000367893 GCP02774 474 aa17.42■□□□□ 0.38
LMX1A-203ENST00000367893 MYT1Q01538 1121 aa17.42■□□□□ 0.38
LMX1A-203ENST00000367893 NLRP13Q86W25 1043 aa17.41■□□□□ 0.38
LMX1A-203ENST00000367893 STRN4Q9NRL3 753 aa17.41■□□□□ 0.38
LMX1A-203ENST00000367893 LMO7Q8WWI1 1683 aa17.4■□□□□ 0.38
LMX1A-203ENST00000367893 AMER1Q5JTC6 1135 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms