RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PLCH1Q4KWH8 1693 aa20.91■□□□□ 0.94
SF3B5-201ENST00000367569 FAM83GA6ND36 823 aa20.89■□□□□ 0.93
SF3B5-201ENST00000367569 VPS72Q15906 364 aa20.89■□□□□ 0.93
SF3B5-201ENST00000367569 CDK19Q9BWU1 502 aa20.89■□□□□ 0.93
SF3B5-201ENST00000367569 CARD11Q9BXL7 1154 aa20.89■□□□□ 0.93
SF3B5-201ENST00000367569 NWD2Q9ULI1 1742 aa20.89■□□□□ 0.93
SF3B5-201ENST00000367569 ALS2Q96Q42 1657 aa20.89■□□□□ 0.93
SF3B5-201ENST00000367569 BRWD3Q6RI45 1802 aa20.88■□□□□ 0.93
SF3B5-201ENST00000367569 NGDNQ8NEJ9 315 aaKnown RBP20.87■□□□□ 0.93
SF3B5-201ENST00000367569 SEPT12Q8IYM1 358 aa20.86■□□□□ 0.93
SF3B5-201ENST00000367569 SRPK2P78362 688 aaKnown RBP20.85■□□□□ 0.93
SF3B5-201ENST00000367569 CCDC125Q86Z20 511 aa20.85■□□□□ 0.93
SF3B5-201ENST00000367569 NUDT16Q96DE0 195 aaKnown RBP20.85■□□□□ 0.93
SF3B5-201ENST00000367569 CABP2Q9NPB3 220 aa20.85■□□□□ 0.93
SF3B5-201ENST00000367569 CCDC9Q9Y3X0 531 aaKnown RBP20.85■□□□□ 0.93
SF3B5-201ENST00000367569 ONECUT3O60422 494 aaPredicted RBP20.83■□□□□ 0.93
SF3B5-201ENST00000367569 PAK3O75914 559 aaPredicted RBP20.83■□□□□ 0.93
SF3B5-201ENST00000367569 CLSPNQ9HAW4 1339 aa20.82■□□□□ 0.92
SF3B5-201ENST00000367569 NRAPQ86VF7 1730 aa20.82■□□□□ 0.92
SF3B5-201ENST00000367569 PPIP5K1Q6PFW1 1433 aa20.82■□□□□ 0.92
SF3B5-201ENST00000367569 BTG4Q9NY30 223 aa20.82■□□□□ 0.92
SF3B5-201ENST00000367569 CRYBG1Q9Y4K1 1723 aa20.81■□□□□ 0.92
SF3B5-201ENST00000367569 COL14A1Q05707 1796 aaKnown RBP20.8■□□□□ 0.92
SF3B5-201ENST00000367569 SRCAPQ6ZRS2 3230 aa20.8■□□□□ 0.92
SF3B5-201ENST00000367569 AKAP12Q02952 1782 aa20.78■□□□□ 0.92
SF3B5-201ENST00000367569 BLMP54132 1417 aaPredicted RBP20.78■□□□□ 0.92
SF3B5-201ENST00000367569 KRT27Q7Z3Y8 459 aa20.77■□□□□ 0.92
SF3B5-201ENST00000367569 ZRANB1Q9UGI0 708 aa20.77■□□□□ 0.92
SF3B5-201ENST00000367569 PHRF1Q9P1Y6 1649 aaKnown RBP20.77■□□□□ 0.92
SF3B5-201ENST00000367569 EVC2Q86UK5 1308 aa20.77■□□□□ 0.91
SF3B5-201ENST00000367569 FAM98CQ17RN3 349 aaKnown RBP20.76■□□□□ 0.91
SF3B5-201ENST00000367569 CCDC61Q9Y6R9 512 aa20.76■□□□□ 0.91
SF3B5-201ENST00000367569 ACEP12821 1306 aa20.76■□□□□ 0.91
SF3B5-201ENST00000367569 POLR3AO14802 1390 aaPredicted RBP20.75■□□□□ 0.91
SF3B5-201ENST00000367569 USP47Q96K76 1375 aa20.75■□□□□ 0.91
SF3B5-201ENST00000367569 A0A0G2JS52 829 aa20.74■□□□□ 0.91
SF3B5-201ENST00000367569 PLEKHG3A1L390 1219 aa20.74■□□□□ 0.91
SF3B5-201ENST00000367569 MYT1Q01538 1121 aa20.74■□□□□ 0.91
SF3B5-201ENST00000367569 NUTM2GQ5VZR2 741 aa20.74■□□□□ 0.91
SF3B5-201ENST00000367569 DEFB132Q7Z7B7 95 aa20.74■□□□□ 0.91
SF3B5-201ENST00000367569 PRDM11Q9NQV5 511 aa20.74■□□□□ 0.91
SF3B5-201ENST00000367569 SPATA31A5Q5VU36 1347 aa20.73■□□□□ 0.91
SF3B5-201ENST00000367569 SPATA31A7Q8IWB4 1347 aa20.73■□□□□ 0.91
SF3B5-201ENST00000367569 KIAA0232Q92628 1395 aa20.72■□□□□ 0.91
SF3B5-201ENST00000367569 SBNO2Q9Y2G9 1366 aa20.72■□□□□ 0.91
SF3B5-201ENST00000367569 NRKQ7Z2Y5 1582 aa20.72■□□□□ 0.91
SF3B5-201ENST00000367569 MON2Q7Z3U7 1717 aa20.72■□□□□ 0.91
SF3B5-201ENST00000367569 ST20-MTHFSA0A0A6YYL1 179 aa20.71■□□□□ 0.91
SF3B5-201ENST00000367569 CHRNA2Q15822 529 aa20.71■□□□□ 0.91
SF3B5-201ENST00000367569 PIK3C2AO00443 1686 aa20.7■□□□□ 0.91
SF3B5-201ENST00000367569 ZC3H6P61129 1189 aaKnown RBP20.7■□□□□ 0.9
SF3B5-201ENST00000367569 SF3B2Q13435 895 aaKnown RBP20.7■□□□□ 0.9
SF3B5-201ENST00000367569 CABP1Q9NZU7 370 aa20.7■□□□□ 0.9
SF3B5-201ENST00000367569 ABTB2Q8N961 1025 aa20.67■□□□□ 0.9
SF3B5-201ENST00000367569 TIMELESSQ9UNS1 1208 aa20.67■□□□□ 0.9
SF3B5-201ENST00000367569 USP6P35125 1406 aa20.67■□□□□ 0.9
SF3B5-201ENST00000367569 FAM182BQ5T319 152 aa20.66■□□□□ 0.9
SF3B5-201ENST00000367569 TESK2Q96S53 571 aa20.66■□□□□ 0.9
SF3B5-201ENST00000367569 STRN4Q9NRL3 753 aa20.66■□□□□ 0.9
SF3B5-201ENST00000367569 SPATA31A1Q5TZJ5 1347 aa20.66■□□□□ 0.9
SF3B5-201ENST00000367569 THSD7AQ9UPZ6 1657 aa20.66■□□□□ 0.9
SF3B5-201ENST00000367569 MYOM1P52179 1685 aa20.65■□□□□ 0.9
SF3B5-201ENST00000367569 USP19O94966 1318 aa20.63■□□□□ 0.89
SF3B5-201ENST00000367569 CD163L1Q9NR16 1453 aa20.62■□□□□ 0.89
SF3B5-201ENST00000367569 TMC1Q8TDI8 760 aa20.62■□□□□ 0.89
SF3B5-201ENST00000367569 NLRP13Q86W25 1043 aa20.61■□□□□ 0.89
SF3B5-201ENST00000367569 CAMTA1Q9Y6Y1 1673 aa20.61■□□□□ 0.89
SF3B5-201ENST00000367569 BAG6P46379 1132 aa20.6■□□□□ 0.89
SF3B5-201ENST00000367569 EVA1CP58658 441 aa20.6■□□□□ 0.89
SF3B5-201ENST00000367569 USP35Q9P2H5 1018 aa20.6■□□□□ 0.89
SF3B5-201ENST00000367569 SSH2Q76I76 1423 aa20.6■□□□□ 0.89
SF3B5-201ENST00000367569 CPDO75976 1380 aa20.59■□□□□ 0.89
SF3B5-201ENST00000367569 GCP02774 474 aa20.59■□□□□ 0.89
SF3B5-201ENST00000367569 CPSF1Q10570 1443 aaKnown RBP20.59■□□□□ 0.89
SF3B5-201ENST00000367569 KTN1Q86UP2 1357 aaKnown RBP20.59■□□□□ 0.89
SF3B5-201ENST00000367569 LMO7Q8WWI1 1683 aa20.58■□□□□ 0.89
SF3B5-201ENST00000367569 LARP1Q6PKG0 1096 aaKnown RBP20.58■□□□□ 0.89
SF3B5-201ENST00000367569 RGPD1P0DJD0 1748 aa20.58■□□□□ 0.88
SF3B5-201ENST00000367569 BRD4O60885 1362 aaPredicted RBP20.58■□□□□ 0.88
SF3B5-201ENST00000367569 EN1Q05925 392 aaPredicted RBP20.57■□□□□ 0.88
SF3B5-201ENST00000367569 SLC12A5Q9H2X9 1139 aa20.57■□□□□ 0.88
SF3B5-201ENST00000367569 A0A1W2PP64 1363 aa20.57■□□□□ 0.88
SF3B5-201ENST00000367569 SLIT3O75094 1523 aa20.55■□□□□ 0.88
SF3B5-201ENST00000367569 BARGINQ6ZT62 677 aa20.55■□□□□ 0.88
SF3B5-201ENST00000367569 TNS1Q9HBL0 1735 aaKnown RBP20.54■□□□□ 0.88
SF3B5-201ENST00000367569 ZBTB7CA1YPR0 619 aa20.54■□□□□ 0.88
SF3B5-201ENST00000367569 NLRP6P59044 892 aa20.54■□□□□ 0.88
SF3B5-201ENST00000367569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.54■□□□□ 0.88
SF3B5-201ENST00000367569 TTC21BQ7Z4L5 1316 aa20.53■□□□□ 0.88
SF3B5-201ENST00000367569 PSDA5PKW4 1024 aaPredicted RBP20.53■□□□□ 0.88
SF3B5-201ENST00000367569 SOX12O15370 315 aa20.53■□□□□ 0.88
SF3B5-201ENST00000367569 HSPA5P11021 654 aaKnown RBP20.53■□□□□ 0.88
SF3B5-201ENST00000367569 TMF1P82094 1093 aa20.53■□□□□ 0.88
SF3B5-201ENST00000367569 TCP11L2Q8N4U5 519 aa20.53■□□□□ 0.88
SF3B5-201ENST00000367569 USP54Q70EL1 1684 aa20.52■□□□□ 0.88
SF3B5-201ENST00000367569 TRIM37O94972 964 aa20.52■□□□□ 0.88
SF3B5-201ENST00000367569 FAM196AQ6ZSG2 479 aa20.52■□□□□ 0.88
SF3B5-201ENST00000367569 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
SF3B5-201ENST00000367569 KIF20BQ96Q89 1820 aa20.52■□□□□ 0.88
SF3B5-201ENST00000367569 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms