RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 EIF2S2P20042 333 aaKnown RBP10.88□□□□□ -0.67
SYNE1-205ENST00000367251 TMEM132EQ6IEE7 984 aa10.88□□□□□ -0.67
SYNE1-205ENST00000367251 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
SYNE1-205ENST00000367251 HMOX1P09601 288 aa10.88□□□□□ -0.67
SYNE1-205ENST00000367251 TPD52L1Q16890 204 aaPredicted RBP10.88□□□□□ -0.67
SYNE1-205ENST00000367251 GRIN2AQ12879 1464 aa10.88□□□□□ -0.67
SYNE1-205ENST00000367251 TWISTNBQ3B726 338 aaPredicted RBP10.88□□□□□ -0.67
SYNE1-205ENST00000367251 ERC1Q8IUD2 1116 aa10.88□□□□□ -0.67
SYNE1-205ENST00000367251 CCT4P50991 539 aaKnown RBP10.87□□□□□ -0.67
SYNE1-205ENST00000367251 ABCC11Q96J66 1382 aa10.87□□□□□ -0.67
SYNE1-205ENST00000367251 TPM2P07951 284 aa10.87□□□□□ -0.67
SYNE1-205ENST00000367251 PRKAR2BP31323 418 aa10.87□□□□□ -0.67
SYNE1-205ENST00000367251 PSME1Q06323 249 aa10.87□□□□□ -0.67
SYNE1-205ENST00000367251 FAM43AQ8N2R8 423 aa10.87□□□□□ -0.67
SYNE1-205ENST00000367251 MCTP1Q6DN14 999 aa10.87□□□□□ -0.67
SYNE1-205ENST00000367251 MTERF4Q7Z6M4 381 aaKnown RBP10.87□□□□□ -0.67
SYNE1-205ENST00000367251 TRAK2O60296 914 aa10.87□□□□□ -0.67
SYNE1-205ENST00000367251 ATF7IPQ6VMQ6 1270 aa10.87□□□□□ -0.67
SYNE1-205ENST00000367251 TSR1Q2NL82 804 aaKnown RBP10.86□□□□□ -0.67
SYNE1-205ENST00000367251 WWC2Q6AWC2 1192 aa10.86□□□□□ -0.67
SYNE1-205ENST00000367251 NOB1Q9ULX3 412 aaKnown RBP10.86□□□□□ -0.67
SYNE1-205ENST00000367251 FCHSD2O94868 740 aa10.86□□□□□ -0.67
SYNE1-205ENST00000367251 FAM69CQ0P6D2 419 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 TRDNQ13061 729 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 ARHGEF11O15085 1522 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 GPS2Q13227 327 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 SASS6Q6UVJ0 657 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 PDIA4P13667 645 aaKnown RBP10.85□□□□□ -0.67
SYNE1-205ENST00000367251 TMEM132AQ24JP5 1023 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 MAP7D2Q96T17 732 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 SRCIN1Q9C0H9 1055 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 UGGT2Q9NYU1 1516 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 FAM135AQ9P2D6 1515 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 GNAI2P04899 355 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 PRAM1Q96QH2 718 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 NKTRP30414 1462 aaKnown RBP10.85□□□□□ -0.67
SYNE1-205ENST00000367251 NSD2O96028 1365 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 CPLX1O14810 134 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 NASPP49321 788 aaPredicted RBP10.85□□□□□ -0.67
SYNE1-205ENST00000367251 CCDC173Q0VFZ6 552 aa10.85□□□□□ -0.67
SYNE1-205ENST00000367251 BCAR3O75815 825 aa10.84□□□□□ -0.67
SYNE1-205ENST00000367251 PDCP20941 246 aa10.84□□□□□ -0.67
SYNE1-205ENST00000367251 BICD2Q8TD16 824 aa10.84□□□□□ -0.67
SYNE1-205ENST00000367251 ITSN2Q9NZM3 1697 aa10.84□□□□□ -0.67
SYNE1-205ENST00000367251 DHX8Q14562 1220 aaKnown RBP10.84□□□□□ -0.67
SYNE1-205ENST00000367251 PPM1FP49593 454 aaPredicted RBP10.84□□□□□ -0.67
SYNE1-205ENST00000367251 ANKRD20A12PQ8NF67 263 aa10.84□□□□□ -0.67
SYNE1-205ENST00000367251 CDK19Q9BWU1 502 aa10.84□□□□□ -0.67
SYNE1-205ENST00000367251 CCDC184Q52MB2 194 aa10.83□□□□□ -0.67
SYNE1-205ENST00000367251 CCDC73Q6ZRK6 1079 aa10.83□□□□□ -0.67
SYNE1-205ENST00000367251 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.67
SYNE1-205ENST00000367251 RAPGEF4Q8WZA2 1011 aa10.83□□□□□ -0.67
SYNE1-205ENST00000367251 CCDC47Q96A33 483 aaKnown RBP10.83□□□□□ -0.67
SYNE1-205ENST00000367251 SLC12A5Q9H2X9 1139 aa10.83□□□□□ -0.67
SYNE1-205ENST00000367251 GPRASP1Q5JY77 1395 aa10.83□□□□□ -0.68
SYNE1-205ENST00000367251 RTEL1-TNFRSF6BF6WH68 1400 aa10.83□□□□□ -0.68
SYNE1-205ENST00000367251 NAT10Q9H0A0 1025 aaKnown RBP10.83□□□□□ -0.68
SYNE1-205ENST00000367251 PLEKHO1Q53GL0 409 aaPredicted RBP10.83□□□□□ -0.68
SYNE1-205ENST00000367251 NSD3Q9BZ95 1437 aa10.83□□□□□ -0.68
SYNE1-205ENST00000367251 SCAF11Q99590 1463 aaKnown RBP10.83□□□□□ -0.68
SYNE1-205ENST00000367251 MAPKBP1O60336 1514 aa10.83□□□□□ -0.68
SYNE1-205ENST00000367251 CYB5RLQ6IPT4 315 aa10.83□□□□□ -0.68
SYNE1-205ENST00000367251 CCDC70Q6NSX1 233 aa10.83□□□□□ -0.68
SYNE1-205ENST00000367251 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.68
SYNE1-205ENST00000367251 PAXIP1Q6ZW49 1069 aaPredicted RBP10.83□□□□□ -0.68
SYNE1-205ENST00000367251 K7ELQ4 463 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-205ENST00000367251 RPAP2Q8IXW5 612 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-205ENST00000367251 CFAP43Q8NDM7 1665 aa10.82□□□□□ -0.68
SYNE1-205ENST00000367251 IKQ13123 557 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-205ENST00000367251 ODF2Q5BJF6 829 aa10.82□□□□□ -0.68
SYNE1-205ENST00000367251 CHD1LQ86WJ1 897 aa10.82□□□□□ -0.68
SYNE1-205ENST00000367251 NUP160Q12769 1436 aa10.82□□□□□ -0.68
SYNE1-205ENST00000367251 UNC13AQ9UPW8 1703 aa10.82□□□□□ -0.68
SYNE1-205ENST00000367251 VPS37CA5D8V6 355 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-205ENST00000367251 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
SYNE1-205ENST00000367251 TCOF1Q13428 1488 aaKnown RBP10.81□□□□□ -0.68
SYNE1-205ENST00000367251 RALGAPBQ86X10 1494 aa10.81□□□□□ -0.68
SYNE1-205ENST00000367251 AEBP1Q8IUX7 1158 aa10.81□□□□□ -0.68
SYNE1-205ENST00000367251 APPP05067 770 aa10.81□□□□□ -0.68
SYNE1-205ENST00000367251 CT47A1Q5JQC4 288 aaPredicted RBP10.81□□□□□ -0.68
SYNE1-205ENST00000367251 CTTNBP2Q8WZ74 1663 aa10.81□□□□□ -0.68
SYNE1-205ENST00000367251 URB2Q14146 1524 aaKnown RBP10.81□□□□□ -0.68
SYNE1-205ENST00000367251 NLRP6P59044 892 aa10.81□□□□□ -0.68
SYNE1-205ENST00000367251 ANKRD1Q15327 319 aa10.8□□□□□ -0.68
SYNE1-205ENST00000367251 TSPY26PQ9H489 355 aa10.8□□□□□ -0.68
SYNE1-205ENST00000367251 ERICH2A1L162 156 aa10.8□□□□□ -0.68
SYNE1-205ENST00000367251 IL27Q8NEV9 243 aa10.8□□□□□ -0.68
SYNE1-205ENST00000367251 DHX29Q7Z478 1369 aaKnown RBP10.8□□□□□ -0.68
SYNE1-205ENST00000367251 SAFBQ15424 915 aaKnown RBP eCLIP10.8□□□□□ -0.68
SYNE1-205ENST00000367251 NFE2L2Q16236 605 aa10.8□□□□□ -0.68
SYNE1-205ENST00000367251 PCMTD1Q96MG8 357 aaPredicted RBP10.8□□□□□ -0.68
SYNE1-205ENST00000367251 LRRCC1Q9C099 1032 aa10.8□□□□□ -0.68
SYNE1-205ENST00000367251 WDR70Q9NW82 654 aa10.8□□□□□ -0.68
SYNE1-205ENST00000367251 PLB1Q6P1J6 1458 aa10.8□□□□□ -0.68
SYNE1-205ENST00000367251 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
SYNE1-205ENST00000367251 RAPGEF6Q8TEU7 1601 aa10.79□□□□□ -0.68
SYNE1-205ENST00000367251 ATF3P18847 181 aa10.79□□□□□ -0.68
SYNE1-205ENST00000367251 LRPPRCP42704 1394 aaKnown RBP10.79□□□□□ -0.68
SYNE1-205ENST00000367251 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
SYNE1-205ENST00000367251 SURF6O75683 361 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms