RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 NUCB1Q02818 461 aa9.73□□□□□ -0.85
CD46-207ENST00000367041 HSP90AB1P08238 724 aaKnown RBP9.73□□□□□ -0.85
CD46-207ENST00000367041 ZSCAN20P17040 1043 aaPredicted RBP9.73□□□□□ -0.85
CD46-207ENST00000367041 DZIP1LQ8IYY4 767 aaKnown RBP9.73□□□□□ -0.85
CD46-207ENST00000367041 INO80Q9ULG1 1556 aaPredicted RBP9.73□□□□□ -0.85
CD46-207ENST00000367041 PTPRTO14522 1441 aa9.73□□□□□ -0.85
CD46-207ENST00000367041 NOS1P29475 1434 aa9.73□□□□□ -0.85
CD46-207ENST00000367041 ZKSCAN2Q63HK3 967 aa9.73□□□□□ -0.85
CD46-207ENST00000367041 TCP11L2Q8N4U5 519 aa9.73□□□□□ -0.85
CD46-207ENST00000367041 RBSNQ9H1K0 784 aa9.73□□□□□ -0.85
CD46-207ENST00000367041 PLEKHD1A6NEE1 506 aa9.72□□□□□ -0.85
CD46-207ENST00000367041 CSPP1Q1MSJ5 1256 aa9.72□□□□□ -0.85
CD46-207ENST00000367041 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
CD46-207ENST00000367041 ZSCAN23Q3MJ62 389 aa9.72□□□□□ -0.85
CD46-207ENST00000367041 BMP2KLQ5H9B9 411 aa9.72□□□□□ -0.85
CD46-207ENST00000367041 CCDC94Q9BW85 323 aaPredicted RBP9.72□□□□□ -0.85
CD46-207ENST00000367041 BCL2L13Q9BXK5 485 aa9.72□□□□□ -0.85
CD46-207ENST00000367041 LMBRD1Q9NUN5 540 aa9.72□□□□□ -0.85
CD46-207ENST00000367041 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
CD46-207ENST00000367041 ZC3H13Q5T200 1668 aaKnown RBP9.71□□□□□ -0.85
CD46-207ENST00000367041 XPCQ01831 940 aaPredicted RBP9.71□□□□□ -0.85
CD46-207ENST00000367041 SASS6Q6UVJ0 657 aa9.71□□□□□ -0.85
CD46-207ENST00000367041 ZBTB40Q9NUA8 1239 aa9.71□□□□□ -0.85
CD46-207ENST00000367041 FGD1P98174 961 aa9.71□□□□□ -0.86
CD46-207ENST00000367041 ANP32BQ92688 251 aaKnown RBP9.71□□□□□ -0.86
CD46-207ENST00000367041 SBNO2Q9Y2G9 1366 aa9.71□□□□□ -0.86
CD46-207ENST00000367041 GLI2P10070 1586 aa9.71□□□□□ -0.86
CD46-207ENST00000367041 TRIM27P14373 513 aa9.71□□□□□ -0.86
CD46-207ENST00000367041 DDX49Q9Y6V7 483 aaKnown RBP9.71□□□□□ -0.86
CD46-207ENST00000367041 IFT172Q9UG01 1749 aa9.7□□□□□ -0.86
CD46-207ENST00000367041 KIF16BQ96L93 1317 aa9.7□□□□□ -0.86
CD46-207ENST00000367041 MED14O60244 1454 aa9.7□□□□□ -0.86
CD46-207ENST00000367041 DDX19BQ9UMR2 479 aa9.7□□□□□ -0.86
CD46-207ENST00000367041 MAP3K4Q9Y6R4 1608 aa9.7□□□□□ -0.86
CD46-207ENST00000367041 AK9Q5TCS8 1911 aa9.69□□□□□ -0.86
CD46-207ENST00000367041 DIP2BQ9P265 1576 aa9.69□□□□□ -0.86
CD46-207ENST00000367041 GOLGA6L22H0YM25 854 aa9.69□□□□□ -0.86
CD46-207ENST00000367041 GTF2F1P35269 517 aaKnown RBP eCLIP9.69□□□□□ -0.86
CD46-207ENST00000367041 MYOM2P54296 1465 aa9.69□□□□□ -0.86
CD46-207ENST00000367041 YEATS2Q9ULM3 1422 aa9.69□□□□□ -0.86
CD46-207ENST00000367041 RRP7AQ9Y3A4 280 aaKnown RBP9.69□□□□□ -0.86
CD46-207ENST00000367041 DEPDC5O75140 1603 aa9.68□□□□□ -0.86
CD46-207ENST00000367041 SLC24A1O60721 1099 aa9.68□□□□□ -0.86
CD46-207ENST00000367041 PRIM1P49642 420 aaKnown RBP9.68□□□□□ -0.86
CD46-207ENST00000367041 ATF7IPQ6VMQ6 1270 aa9.67□□□□□ -0.86
CD46-207ENST00000367041 CHD1LQ86WJ1 897 aa9.67□□□□□ -0.86
CD46-207ENST00000367041 MYRIPQ8NFW9 859 aa9.67□□□□□ -0.86
CD46-207ENST00000367041 RBM42Q9BTD8 480 aaKnown RBP9.67□□□□□ -0.86
CD46-207ENST00000367041 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
CD46-207ENST00000367041 GPT2Q8TD30 523 aa9.67□□□□□ -0.86
CD46-207ENST00000367041 NRXN1Q9ULB1 1477 aa9.67□□□□□ -0.86
CD46-207ENST00000367041 FTSJ3Q8IY81 847 aaKnown RBP9.67□□□□□ -0.86
CD46-207ENST00000367041 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
CD46-207ENST00000367041 CAVIN1Q6NZI2 390 aaKnown RBP9.66□□□□□ -0.86
CD46-207ENST00000367041 CD109Q6YHK3 1445 aa9.66□□□□□ -0.86
CD46-207ENST00000367041 TBC1D9Q6ZT07 1266 aa9.66□□□□□ -0.86
CD46-207ENST00000367041 LRSAM1Q6UWE0 723 aa9.66□□□□□ -0.86
CD46-207ENST00000367041 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
CD46-207ENST00000367041 SSH1Q8WYL5 1049 aa9.65□□□□□ -0.86
CD46-207ENST00000367041 GTPBP4Q9BZE4 634 aaKnown RBP9.65□□□□□ -0.86
CD46-207ENST00000367041 ZHX1Q9UKY1 873 aaPredicted RBP9.65□□□□□ -0.86
CD46-207ENST00000367041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.65□□□□□ -0.861e-6■□□□□ 10.9
CD46-207ENST00000367041 ABCC11Q96J66 1382 aa9.65□□□□□ -0.86
CD46-207ENST00000367041 PPIP5K1Q6PFW1 1433 aa9.65□□□□□ -0.86
CD46-207ENST00000367041 TET3O43151 1660 aa9.65□□□□□ -0.86
CD46-207ENST00000367041 A0A0U1RQG5 324 aaPredicted RBP9.65□□□□□ -0.86
CD46-207ENST00000367041 NUCB2P80303 420 aa9.65□□□□□ -0.86
CD46-207ENST00000367041 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.86
CD46-207ENST00000367041 VWDEQ8N2E2 1590 aa9.65□□□□□ -0.86
CD46-207ENST00000367041 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.86
CD46-207ENST00000367041 TMEM57Q8N5G2 664 aa9.65□□□□□ -0.87
CD46-207ENST00000367041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.65□□□□□ -0.874e-9■■□□□ 11.7
CD46-207ENST00000367041 PRDM10Q9NQV6 1147 aa9.65□□□□□ -0.87
CD46-207ENST00000367041 SETBP1Q9Y6X0 1596 aa9.65□□□□□ -0.87
CD46-207ENST00000367041 KIF20AO95235 890 aa9.64□□□□□ -0.87
CD46-207ENST00000367041 MCTP1Q6DN14 999 aa9.64□□□□□ -0.87
CD46-207ENST00000367041 ZDHHC9Q9Y397 364 aa9.64□□□□□ -0.87
CD46-207ENST00000367041 PIK3R4Q99570 1358 aa9.64□□□□□ -0.87
CD46-207ENST00000367041 BRPF1P55201 1214 aaPredicted RBP9.64□□□□□ -0.87
CD46-207ENST00000367041 ITPRIPQ8IWB1 547 aa9.64□□□□□ -0.87
CD46-207ENST00000367041 LNPKQ9C0E8 428 aa9.64□□□□□ -0.87
CD46-207ENST00000367041 TMEM63CQ9P1W3 806 aa9.64□□□□□ -0.87
CD46-207ENST00000367041 IL16Q14005 1332 aa9.64□□□□□ -0.87
CD46-207ENST00000367041 HMGN5P82970 282 aaKnown RBP9.63□□□□□ -0.87
CD46-207ENST00000367041 PKP1Q13835 747 aa9.63□□□□□ -0.87
CD46-207ENST00000367041 PRIMPOLQ96LW4 560 aa9.63□□□□□ -0.87
CD46-207ENST00000367041 PLEKHF1Q96S99 279 aa9.63□□□□□ -0.87
CD46-207ENST00000367041 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
CD46-207ENST00000367041 NOB1Q9ULX3 412 aaKnown RBP9.63□□□□□ -0.87
CD46-207ENST00000367041 COL3A1P02461 1466 aaPredicted RBP9.63□□□□□ -0.87
CD46-207ENST00000367041 ARHGAP5Q13017 1502 aa9.63□□□□□ -0.87
CD46-207ENST00000367041 EXOSC9Q06265 439 aaKnown RBP9.63□□□□□ -0.87
CD46-207ENST00000367041 RABEP1Q15276 862 aa9.62□□□□□ -0.87
CD46-207ENST00000367041 CWC22Q9HCG8 908 aaKnown RBP9.62□□□□□ -0.87
CD46-207ENST00000367041 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
CD46-207ENST00000367041 TRAPPC8Q9Y2L5 1435 aa9.62□□□□□ -0.87
CD46-207ENST00000367041 TSR2Q969E8 191 aaKnown RBP9.62□□□□□ -0.87
CD46-207ENST00000367041 GCC1Q96CN9 775 aa9.62□□□□□ -0.87
CD46-207ENST00000367041 QRICH2Q9H0J4 1663 aa9.62□□□□□ -0.87
CD46-207ENST00000367041 RBM27Q9P2N5 1060 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms