RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 NPHP3Q7Z494 1330 aa21.45■■□□□ 1.02
CNIH4-204ENST00000366860 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
CNIH4-204ENST00000366860 KNSTRNQ9Y448 316 aa21.44■■□□□ 1.02
CNIH4-204ENST00000366860 NSD2O96028 1365 aa21.44■■□□□ 1.02
CNIH4-204ENST00000366860 BRINP3Q76B58 766 aa21.43■■□□□ 1.02
CNIH4-204ENST00000366860 NPC1L1Q9UHC9 1359 aa21.43■■□□□ 1.02
CNIH4-204ENST00000366860 CGNL1Q0VF96 1302 aa21.42■■□□□ 1.02
CNIH4-204ENST00000366860 PIK3C2AO00443 1686 aa21.41■■□□□ 1.02
CNIH4-204ENST00000366860 PXDNQ92626 1479 aa21.41■■□□□ 1.02
CNIH4-204ENST00000366860 SSH2Q76I76 1423 aa21.41■■□□□ 1.02
CNIH4-204ENST00000366860 TTC21AQ8NDW8 1320 aa21.4■■□□□ 1.02
CNIH4-204ENST00000366860 ALS2Q96Q42 1657 aa21.4■■□□□ 1.02
CNIH4-204ENST00000366860 UBAP1LF5GYI3 381 aa21.39■■□□□ 1.01
CNIH4-204ENST00000366860 DIEXFQ68CQ4 756 aaKnown RBP21.39■■□□□ 1.01
CNIH4-204ENST00000366860 PHLPP1O60346 1717 aa21.38■■□□□ 1.01
CNIH4-204ENST00000366860 PER1O15534 1290 aaPredicted RBP21.38■■□□□ 1.01
CNIH4-204ENST00000366860 CARD14Q9BXL6 1004 aa21.38■■□□□ 1.01
CNIH4-204ENST00000366860 SBNO1A3KN83 1393 aa21.37■■□□□ 1.01
CNIH4-204ENST00000366860 FOXO3O43524 673 aa21.37■■□□□ 1.01
CNIH4-204ENST00000366860 PSME1Q06323 249 aa21.37■■□□□ 1.01
CNIH4-204ENST00000366860 TNS3Q68CZ2 1445 aa21.36■■□□□ 1.01
CNIH4-204ENST00000366860 TTC21BQ7Z4L5 1316 aa21.35■■□□□ 1.01
CNIH4-204ENST00000366860 AMER1Q5JTC6 1135 aaPredicted RBP21.34■■□□□ 1.01
CNIH4-204ENST00000366860 MED1Q15648 1581 aaPredicted RBP21.34■■□□□ 1.01
CNIH4-204ENST00000366860 MARF1Q9Y4F3 1742 aaKnown RBP21.34■■□□□ 1.01
CNIH4-204ENST00000366860 COL16A1Q07092 1604 aaPredicted RBP21.33■■□□□ 1.01
CNIH4-204ENST00000366860 SOS2Q07890 1332 aaPredicted RBP21.32■■□□□ 1
CNIH4-204ENST00000366860 OVOS2A0A0J9YW53 1432 aa21.32■■□□□ 1
CNIH4-204ENST00000366860 OVOS2Q6IE36 1432 aa21.32■■□□□ 1
CNIH4-204ENST00000366860 KRT28Q7Z3Y7 464 aa21.32■■□□□ 1
CNIH4-204ENST00000366860 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.32■■□□□ 1
CNIH4-204ENST00000366860 ARHGEF10O15013 1369 aa21.32■■□□□ 1
CNIH4-204ENST00000366860 ANP32CO43423 234 aa21.31■■□□□ 1
CNIH4-204ENST00000366860 USP31Q70CQ4 1352 aa21.31■■□□□ 1
CNIH4-204ENST00000366860 PARD3Q8TEW0 1356 aa21.3■■□□□ 1
CNIH4-204ENST00000366860 CRYBG1Q9Y4K1 1723 aa21.29■■□□□ 1
CNIH4-204ENST00000366860 PAK3O75914 559 aaPredicted RBP21.29■■□□□ 1
CNIH4-204ENST00000366860 PIP4K2BP78356 416 aa21.29■■□□□ 1
CNIH4-204ENST00000366860 PHRF1Q9P1Y6 1649 aaKnown RBP21.29■■□□□ 1
CNIH4-204ENST00000366860 XPCQ01831 940 aaPredicted RBP21.28■■□□□ 1
CNIH4-204ENST00000366860 ABCA3Q99758 1704 aa21.28■■□□□ 1
CNIH4-204ENST00000366860 COL22A1Q8NFW1 1626 aaPredicted RBP21.28■■□□□ 1
CNIH4-204ENST00000366860 FYB1O15117 783 aa21.27■■□□□ 1
CNIH4-204ENST00000366860 RALBP1Q15311 655 aa21.27■■□□□ 1
CNIH4-204ENST00000366860 CC2D1BQ5T0F9 858 aaKnown RBP21.27■■□□□ 1
CNIH4-204ENST00000366860 NME9Q86XW9 330 aa21.27■■□□□ 1
CNIH4-204ENST00000366860 SLIT3O75094 1523 aa21.27■■□□□ 1
CNIH4-204ENST00000366860 ABTB2Q8N961 1025 aa21.26■□□□□ 0.99
CNIH4-204ENST00000366860 COG3Q96JB2 828 aa21.26■□□□□ 0.99
CNIH4-204ENST00000366860 SPATA31A3Q5VYP0 1347 aa21.26■□□□□ 0.99
CNIH4-204ENST00000366860 SHPRHQ149N8 1683 aa21.25■□□□□ 0.99
CNIH4-204ENST00000366860 DDX17Q92841 729 aaKnown RBP21.25■□□□□ 0.99
CNIH4-204ENST00000366860 GGNBP2Q9H3C7 697 aa21.24■□□□□ 0.99
CNIH4-204ENST00000366860 PRKRIP1Q9H875 184 aaPredicted RBP21.24■□□□□ 0.99
CNIH4-204ENST00000366860 MORC1Q86VD1 984 aa21.23■□□□□ 0.99
CNIH4-204ENST00000366860 NLRP13Q86W25 1043 aa21.22■□□□□ 0.99
CNIH4-204ENST00000366860 USP19O94966 1318 aa21.22■□□□□ 0.99
CNIH4-204ENST00000366860 NFAT5O94916 1531 aa21.21■□□□□ 0.99
CNIH4-204ENST00000366860 NLRP6P59044 892 aa21.21■□□□□ 0.99
CNIH4-204ENST00000366860 LRRC59Q96AG4 307 aaKnown RBP21.21■□□□□ 0.99
CNIH4-204ENST00000366860 LTN1O94822 1766 aa21.2■□□□□ 0.99
CNIH4-204ENST00000366860 MAP2P11137 1827 aaKnown RBP21.2■□□□□ 0.98
CNIH4-204ENST00000366860 LMOD2Q6P5Q4 547 aa21.2■□□□□ 0.98
CNIH4-204ENST00000366860 MYBBP1AQ9BQG0 1328 aaKnown RBP21.2■□□□□ 0.98
CNIH4-204ENST00000366860 AATKQ6ZMQ8 1374 aa21.2■□□□□ 0.98
CNIH4-204ENST00000366860 SMG6Q86US8 1419 aaKnown RBP21.19■□□□□ 0.98
CNIH4-204ENST00000366860 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
CNIH4-204ENST00000366860 KCNH5Q8NCM2 988 aa21.17■□□□□ 0.98
CNIH4-204ENST00000366860 PNPLA6Q8IY17 1366 aa21.17■□□□□ 0.98
CNIH4-204ENST00000366860 ABCC6O95255 1503 aa21.17■□□□□ 0.98
CNIH4-204ENST00000366860 CDK12Q9NYV4 1490 aaPredicted RBP21.15■□□□□ 0.98
CNIH4-204ENST00000366860 NUTM2GQ5VZR2 741 aa21.15■□□□□ 0.98
CNIH4-204ENST00000366860 ZRANB1Q9UGI0 708 aa21.15■□□□□ 0.98
CNIH4-204ENST00000366860 JCADQ9P266 1359 aa21.14■□□□□ 0.98
CNIH4-204ENST00000366860 RTL1A6NKG5 1358 aa21.13■□□□□ 0.97
CNIH4-204ENST00000366860 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
CNIH4-204ENST00000366860 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
CNIH4-204ENST00000366860 TNNT2P45379 298 aaPredicted RBP21.11■□□□□ 0.97
CNIH4-204ENST00000366860 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
CNIH4-204ENST00000366860 GCP02774 474 aa21.09■□□□□ 0.97
CNIH4-204ENST00000366860 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
CNIH4-204ENST00000366860 CPDO75976 1380 aa21.09■□□□□ 0.97
CNIH4-204ENST00000366860 CCER2I3L3R5 266 aa21.08■□□□□ 0.97
CNIH4-204ENST00000366860 RNF216Q9NWF9 866 aaPredicted RBP21.08■□□□□ 0.97
CNIH4-204ENST00000366860 FLT4P35916 1363 aa21.08■□□□□ 0.96
CNIH4-204ENST00000366860 SOX12O15370 315 aa21.07■□□□□ 0.96
CNIH4-204ENST00000366860 MIER1Q8N108 512 aa21.07■□□□□ 0.96
CNIH4-204ENST00000366860 FBXO41Q8TF61 875 aa21.07■□□□□ 0.96
CNIH4-204ENST00000366860 FAM208AQ9UK61 1670 aaKnown RBP21.06■□□□□ 0.96
CNIH4-204ENST00000366860 COL14A1Q05707 1796 aaKnown RBP21.06■□□□□ 0.96
CNIH4-204ENST00000366860 HSPA1LP34931 641 aa21.06■□□□□ 0.96
CNIH4-204ENST00000366860 CFAP53Q96M91 514 aa21.06■□□□□ 0.96
CNIH4-204ENST00000366860 MAP3K19Q56UN5 1328 aa21.05■□□□□ 0.96
CNIH4-204ENST00000366860 COL3A1P02461 1466 aaPredicted RBP21.05■□□□□ 0.96
CNIH4-204ENST00000366860 SPATA31A6Q5VVP1 1343 aa21.04■□□□□ 0.96
CNIH4-204ENST00000366860 BLMP54132 1417 aaPredicted RBP21.04■□□□□ 0.96
CNIH4-204ENST00000366860 POLKQ9UBT6 870 aa21.04■□□□□ 0.96
CNIH4-204ENST00000366860 LMO7Q8WWI1 1683 aa21.04■□□□□ 0.96
CNIH4-204ENST00000366860 COL18A1P39060 1754 aa21.03■□□□□ 0.96
CNIH4-204ENST00000366860 INSRP06213 1382 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms