RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 KIAA1211Q6ZU35 1233 aa6.58□□□□□ -1.36
CDC42BPA-204ENST00000366767 CDC45O75419 566 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 NFE2L2Q16236 605 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 CROCC2H7BZ55 1655 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 CIZ1Q9ULV3 898 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 NOB1Q9ULX3 412 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 ASXL2Q76L83 1435 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 ARAP3Q8WWN8 1544 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 PRDM15P57071 1507 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 MTERF4Q7Z6M4 381 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 GPATCH3Q96I76 525 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 PRKAR2BP31323 418 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 PLPPR3Q6T4P5 718 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 MYO5CQ9NQX4 1742 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 ATP7AQ04656 1500 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 TRPM2O94759 1503 aa6.57□□□□□ -1.36
CDC42BPA-204ENST00000366767 TWISTNBQ3B726 338 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 IL27Q8NEV9 243 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 GAS2L2Q8NHY3 880 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 NOM1Q5C9Z4 860 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 C20orf194Q5TEA3 1177 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 PTPRTO14522 1441 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 TEX35Q5T0J7 233 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 RPAP2Q8IXW5 612 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 IFT57Q9NWB7 429 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 ZMYM3Q14202 1370 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 MCM2P49736 904 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 CABP1Q9NZU7 370 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 PHF14O94880 888 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 CYB5RLQ6IPT4 315 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 FAM43AQ8N2R8 423 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 MYOM2P54296 1465 aa6.56□□□□□ -1.36
CDC42BPA-204ENST00000366767 SYNMO15061 1565 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 MRE11P49959 708 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 HSP90AB4PQ58FF6 505 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 ABCC1P33527 1531 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 LNPKQ9C0E8 428 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 IQGAP3Q86VI3 1631 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 UNC13BO14795 1591 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 HTATSF1O43719 755 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 HDAC1Q13547 482 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 CHMP4CQ96CF2 233 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 PLEKHH1Q9ULM0 1364 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 CHD1LQ86WJ1 897 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 ARHGAP45Q92619 1136 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 ELL2O00472 640 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 SLC4A10Q6U841 1118 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 IDI1Q13907 227 aa6.55□□□□□ -1.36
CDC42BPA-204ENST00000366767 KCNJ4P48050 445 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 CCDC61Q9Y6R9 512 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 GNAI3P08754 354 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 CWC22Q9HCG8 908 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 LAMC1P11047 1609 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 CCDC66A2RUB6 948 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 RAPGEF3O95398 923 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 RABEP1Q15276 862 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 LRRIQ1Q96JM4 1722 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 KDM2BQ8NHM5 1336 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 CDC42BPAQ5VT25 1732 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 ZFYVE9O95405 1425 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 HMOX1P09601 288 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 CCT4P50991 539 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 ATP6V1DQ9Y5K8 247 aa6.54□□□□□ -1.36
CDC42BPA-204ENST00000366767 CFAP74Q9C0B2 1584 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 SOX12O15370 315 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 CCDC30Q5VVM6 783 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 TRIM6-TRIM34B2RNG4 842 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 PDE4CQ08493 712 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 TRMT2AQ8IZ69 625 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 CARD14Q9BXL6 1004 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 DDX49Q9Y6V7 483 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 TTC37Q6PGP7 1564 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 GPS2Q13227 327 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 TSPYL4Q9UJ04 414 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 TPM4P67936 248 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 RUFY2Q8WXA3 655 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 RRP9O43818 475 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 TSR2Q969E8 191 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 TRAK2O60296 914 aa6.53□□□□□ -1.36
CDC42BPA-204ENST00000366767 TRPM1Q7Z4N2 1603 aa6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 PLA2R1Q13018 1463 aa6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 C8orf34Q49A92 452 aa6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 APBB1O00213 710 aa6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 IGHDP01880 384 aa6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 NUDT16Q96DE0 195 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 TMEM57Q8N5G2 664 aa6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 FRAT2O75474 233 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 KDM5AP29375 1690 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 SSH1Q8WYL5 1049 aa6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 SRCIN1Q9C0H9 1055 aa6.52□□□□□ -1.37
CDC42BPA-204ENST00000366767 SHROOM2Q13796 1616 aa6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 K7ELQ4 463 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 WASLO00401 505 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 BRPF3Q9ULD4 1205 aa6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 R3HCC1Q9Y3T6 440 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 POLR1AO95602 1720 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 TBC1D32Q96NH3 1257 aa6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 PTPRCP08575 1304 aa6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 GNAI2P04899 355 aa6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 MCM4P33991 863 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms