RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 FSD1Q9BTV5 496 aa12.48□□□□□ -0.41
ZNF548-202ENST00000366197 TBC1D2BQ9UPU7 963 aa12.48□□□□□ -0.41
ZNF548-202ENST00000366197 RTEL1-TNFRSF6BF6WH68 1400 aa12.48□□□□□ -0.41
ZNF548-202ENST00000366197 A0A0U1RQG5 324 aaPredicted RBP12.48□□□□□ -0.41
ZNF548-202ENST00000366197 PNISRQ8TF01 805 aaKnown RBP12.48□□□□□ -0.41
ZNF548-202ENST00000366197 HOOK1Q9UJC3 728 aaKnown RBP12.48□□□□□ -0.41
ZNF548-202ENST00000366197 CNTROBQ8N137 903 aa12.48□□□□□ -0.41
ZNF548-202ENST00000366197 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
ZNF548-202ENST00000366197 IPO7O95373 1038 aaKnown RBP12.47□□□□□ -0.41
ZNF548-202ENST00000366197 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
ZNF548-202ENST00000366197 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
ZNF548-202ENST00000366197 GOLGA6L1Q8N7Z2 621 aa12.47□□□□□ -0.41
ZNF548-202ENST00000366197 PRM3Q9NNZ6 103 aa12.47□□□□□ -0.41
ZNF548-202ENST00000366197 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
ZNF548-202ENST00000366197 CABP4P57796 275 aa12.47□□□□□ -0.41
ZNF548-202ENST00000366197 FYB1O15117 783 aa12.46□□□□□ -0.41
ZNF548-202ENST00000366197 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-202ENST00000366197 CCDC43Q96MW1 224 aaKnown RBP12.46□□□□□ -0.41
ZNF548-202ENST00000366197 EHBP1L1Q8N3D4 1523 aa12.46□□□□□ -0.41
ZNF548-202ENST00000366197 SPG7Q9UQ90 795 aa12.46□□□□□ -0.42
ZNF548-202ENST00000366197 GNAI2P04899 355 aa12.46□□□□□ -0.42
ZNF548-202ENST00000366197 PDE3AQ14432 1141 aa12.46□□□□□ -0.42
ZNF548-202ENST00000366197 PSMA5P28066 241 aa12.45□□□□□ -0.42
ZNF548-202ENST00000366197 ATAD2Q6PL18 1390 aa12.45□□□□□ -0.42
ZNF548-202ENST00000366197 NINLQ9Y2I6 1382 aa12.45□□□□□ -0.42
ZNF548-202ENST00000366197 PLB1Q6P1J6 1458 aa12.45□□□□□ -0.42
ZNF548-202ENST00000366197 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
ZNF548-202ENST00000366197 TSR2Q969E8 191 aaKnown RBP12.45□□□□□ -0.42
ZNF548-202ENST00000366197 CCDC73Q6ZRK6 1079 aa12.45□□□□□ -0.42
ZNF548-202ENST00000366197 ERC1Q8IUD2 1116 aa12.45□□□□□ -0.42
ZNF548-202ENST00000366197 ARID3AQ99856 593 aa12.45□□□□□ -0.42
ZNF548-202ENST00000366197 SART3Q15020 963 aaKnown RBP12.44□□□□□ -0.42
ZNF548-202ENST00000366197 PCMTD1Q96MG8 357 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-202ENST00000366197 CWC22Q9HCG8 908 aaKnown RBP12.44□□□□□ -0.42
ZNF548-202ENST00000366197 XBP1P17861 261 aa12.44□□□□□ -0.42
ZNF548-202ENST00000366197 GSE1Q14687 1217 aa12.43□□□□□ -0.42
ZNF548-202ENST00000366197 SRCIN1Q9C0H9 1055 aa12.43□□□□□ -0.42
ZNF548-202ENST00000366197 CNNM1Q9NRU3 951 aa12.43□□□□□ -0.42
ZNF548-202ENST00000366197 UNC13AQ9UPW8 1703 aa12.43□□□□□ -0.42
ZNF548-202ENST00000366197 ERBINQ96RT1 1412 aa12.43□□□□□ -0.42
ZNF548-202ENST00000366197 SF3B2Q13435 895 aaKnown RBP12.43□□□□□ -0.42
ZNF548-202ENST00000366197 DNAJC2Q99543 621 aaKnown RBP12.43□□□□□ -0.42
ZNF548-202ENST00000366197 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
ZNF548-202ENST00000366197 HIP1O00291 1037 aa12.42□□□□□ -0.42
ZNF548-202ENST00000366197 CCT4P50991 539 aaKnown RBP12.42□□□□□ -0.42
ZNF548-202ENST00000366197 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
ZNF548-202ENST00000366197 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
ZNF548-202ENST00000366197 CT47B1P0C2W7 299 aaPredicted RBP12.42□□□□□ -0.42
ZNF548-202ENST00000366197 BRMS1Q9HCU9 246 aa12.42□□□□□ -0.42
ZNF548-202ENST00000366197 CCAR2Q8N163 923 aaKnown RBP12.42□□□□□ -0.42
ZNF548-202ENST00000366197 CCDC158Q5M9N0 1113 aa12.41□□□□□ -0.42
ZNF548-202ENST00000366197 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
ZNF548-202ENST00000366197 FOSBP53539 338 aa12.41□□□□□ -0.42
ZNF548-202ENST00000366197 SASS6Q6UVJ0 657 aa12.41□□□□□ -0.42
ZNF548-202ENST00000366197 NOB1Q9ULX3 412 aaKnown RBP12.41□□□□□ -0.42
ZNF548-202ENST00000366197 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-202ENST00000366197 DAPK1P53355 1430 aa12.41□□□□□ -0.42
ZNF548-202ENST00000366197 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
ZNF548-202ENST00000366197 RRS1Q15050 365 aaKnown RBP12.41□□□□□ -0.42
ZNF548-202ENST00000366197 GNL3LQ9NVN8 582 aaKnown RBP12.41□□□□□ -0.42
ZNF548-202ENST00000366197 FCHSD2O94868 740 aa12.41□□□□□ -0.42
ZNF548-202ENST00000366197 IKQ13123 557 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-202ENST00000366197 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
ZNF548-202ENST00000366197 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
ZNF548-202ENST00000366197 NEK4P51957 841 aa12.4□□□□□ -0.42
ZNF548-202ENST00000366197 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
ZNF548-202ENST00000366197 PDZRN3Q9UPQ7 1066 aa12.4□□□□□ -0.42
ZNF548-202ENST00000366197 PEG3Q9GZU2 1588 aa12.4□□□□□ -0.43
ZNF548-202ENST00000366197 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
ZNF548-202ENST00000366197 ATF7IPQ6VMQ6 1270 aa12.39□□□□□ -0.43
ZNF548-202ENST00000366197 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
ZNF548-202ENST00000366197 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
ZNF548-202ENST00000366197 SLC3A2P08195 630 aaKnown RBP12.39□□□□□ -0.43
ZNF548-202ENST00000366197 SDF4Q9BRK5 362 aa12.39□□□□□ -0.43
ZNF548-202ENST00000366197 BCAR3O75815 825 aa12.39□□□□□ -0.43
ZNF548-202ENST00000366197 PDCP20941 246 aa12.39□□□□□ -0.43
ZNF548-202ENST00000366197 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
ZNF548-202ENST00000366197 ADGRL1O94910 1474 aa12.39□□□□□ -0.43
ZNF548-202ENST00000366197 HECW1Q76N89 1606 aa12.38□□□□□ -0.43
ZNF548-202ENST00000366197 CCDC70Q6NSX1 233 aa12.38□□□□□ -0.43
ZNF548-202ENST00000366197 MYL6BP14649 208 aa12.38□□□□□ -0.43
ZNF548-202ENST00000366197 MCM2P49736 904 aa12.38□□□□□ -0.43
ZNF548-202ENST00000366197 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
ZNF548-202ENST00000366197 CCDC57Q2TAC2 916 aa12.38□□□□□ -0.43
ZNF548-202ENST00000366197 ZNF428Q96B54 188 aa12.38□□□□□ -0.43
ZNF548-202ENST00000366197 DENND4BO75064 1496 aaPredicted RBP12.38□□□□□ -0.43
ZNF548-202ENST00000366197 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.43
ZNF548-202ENST00000366197 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
ZNF548-202ENST00000366197 TTC39AQ5SRH9 613 aa12.37□□□□□ -0.43
ZNF548-202ENST00000366197 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
ZNF548-202ENST00000366197 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
ZNF548-202ENST00000366197 EPRSP07814 1512 aaKnown RBP12.37□□□□□ -0.43
ZNF548-202ENST00000366197 RRP12Q5JTH9 1297 aaKnown RBP12.37□□□□□ -0.43
ZNF548-202ENST00000366197 SIL1Q9H173 461 aa12.37□□□□□ -0.43
ZNF548-202ENST00000366197 PPP1R1BQ9UD71 204 aaPredicted RBP12.37□□□□□ -0.43
ZNF548-202ENST00000366197 PPP6R1Q9UPN7 881 aa12.37□□□□□ -0.43
ZNF548-202ENST00000366197 BTBD11A6QL63 1104 aa12.36□□□□□ -0.43
ZNF548-202ENST00000366197 ATP2B1P20020 1258 aa12.36□□□□□ -0.43
ZNF548-202ENST00000366197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.36□□□□□ -0.43
ZNF548-202ENST00000366197 WAPLQ7Z5K2 1190 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms