RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 PUS7Q96PZ0 661 aaKnown RBP23.86■■□□□ 1.41
CKLF-204ENST00000362093 SLC24A1O60721 1099 aa23.85■■□□□ 1.41
CKLF-204ENST00000362093 USP47Q96K76 1375 aa23.84■■□□□ 1.41
CKLF-204ENST00000362093 PLEKHG5O94827 1062 aa23.84■■□□□ 1.41
CKLF-204ENST00000362093 HAP1P54257 671 aaPredicted RBP23.83■■□□□ 1.41
CKLF-204ENST00000362093 BRD4O60885 1362 aaPredicted RBP23.82■■□□□ 1.4
CKLF-204ENST00000362093 ZNF692Q9BU19 519 aaPredicted RBP23.82■■□□□ 1.4
CKLF-204ENST00000362093 QTRT2Q9H974 415 aaKnown RBP23.82■■□□□ 1.4
CKLF-204ENST00000362093 USP21Q9UK80 565 aa23.82■■□□□ 1.4
CKLF-204ENST00000362093 USP6P35125 1406 aa23.8■■□□□ 1.4
CKLF-204ENST00000362093 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
CKLF-204ENST00000362093 MARF1Q9Y4F3 1742 aaKnown RBP23.79■■□□□ 1.4
CKLF-204ENST00000362093 SSH2Q76I76 1423 aa23.79■■□□□ 1.4
CKLF-204ENST00000362093 CPSF1Q10570 1443 aaKnown RBP23.78■■□□□ 1.4
CKLF-204ENST00000362093 RXRBP28702 533 aa23.78■■□□□ 1.4
CKLF-204ENST00000362093 NUTM2GQ5VZR2 741 aa23.78■■□□□ 1.4
CKLF-204ENST00000362093 BCL9LQ86UU0 1499 aa23.78■■□□□ 1.4
CKLF-204ENST00000362093 FAM83GA6ND36 823 aa23.77■■□□□ 1.4
CKLF-204ENST00000362093 SLC12A5Q9H2X9 1139 aa23.76■■□□□ 1.39
CKLF-204ENST00000362093 TRPC5Q9UL62 973 aaPredicted RBP23.76■■□□□ 1.39
CKLF-204ENST00000362093 ABCA3Q99758 1704 aa23.76■■□□□ 1.39
CKLF-204ENST00000362093 SLIT2O94813 1529 aa23.75■■□□□ 1.39
CKLF-204ENST00000362093 RBM6P78332 1123 aaKnown RBP23.74■■□□□ 1.39
CKLF-204ENST00000362093 TMF1P82094 1093 aa23.74■■□□□ 1.39
CKLF-204ENST00000362093 NLRP13Q86W25 1043 aa23.74■■□□□ 1.39
CKLF-204ENST00000362093 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
CKLF-204ENST00000362093 TMC1Q8TDI8 760 aa23.74■■□□□ 1.39
CKLF-204ENST00000362093 TTC21BQ7Z4L5 1316 aa23.73■■□□□ 1.39
CKLF-204ENST00000362093 CRYBG1Q9Y4K1 1723 aa23.73■■□□□ 1.39
CKLF-204ENST00000362093 USP19O94966 1318 aa23.72■■□□□ 1.39
CKLF-204ENST00000362093 ATRNO75882 1429 aa23.72■■□□□ 1.39
CKLF-204ENST00000362093 CD163L1Q9NR16 1453 aa23.72■■□□□ 1.39
CKLF-204ENST00000362093 KTN1Q86UP2 1357 aaKnown RBP23.71■■□□□ 1.39
CKLF-204ENST00000362093 AKAP12Q02952 1782 aa23.7■■□□□ 1.39
CKLF-204ENST00000362093 NLRP6P59044 892 aa23.7■■□□□ 1.38
CKLF-204ENST00000362093 TTC21AQ8NDW8 1320 aa23.69■■□□□ 1.38
CKLF-204ENST00000362093 HDGFL2Q7Z4V5 671 aaPredicted RBP23.69■■□□□ 1.38
CKLF-204ENST00000362093 CDK12Q9NYV4 1490 aaPredicted RBP23.68■■□□□ 1.38
CKLF-204ENST00000362093 GCP02774 474 aa23.68■■□□□ 1.38
CKLF-204ENST00000362093 TERF2IPQ9NYB0 399 aa23.68■■□□□ 1.38
CKLF-204ENST00000362093 NINLQ9Y2I6 1382 aa23.67■■□□□ 1.38
CKLF-204ENST00000362093 ZC3H6P61129 1189 aaKnown RBP23.67■■□□□ 1.38
CKLF-204ENST00000362093 EIF4G2P78344 907 aaKnown RBP eCLIP23.67■■□□□ 1.38
CKLF-204ENST00000362093 CDCA8Q53HL2 280 aa23.67■■□□□ 1.38
CKLF-204ENST00000362093 GJD4Q96KN9 370 aaPredicted RBP23.67■■□□□ 1.38
CKLF-204ENST00000362093 PRDM11Q9NQV5 511 aa23.67■■□□□ 1.38
CKLF-204ENST00000362093 KIAA0232Q92628 1395 aa23.66■■□□□ 1.38
CKLF-204ENST00000362093 BTG4Q9NY30 223 aa23.66■■□□□ 1.38
CKLF-204ENST00000362093 PHRF1Q9P1Y6 1649 aaKnown RBP23.65■■□□□ 1.38
CKLF-204ENST00000362093 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
CKLF-204ENST00000362093 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.64■■□□□ 1.38
CKLF-204ENST00000362093 HSPA5P11021 654 aaKnown RBP23.64■■□□□ 1.37
CKLF-204ENST00000362093 VPS72Q15906 364 aa23.64■■□□□ 1.37
CKLF-204ENST00000362093 CHRNA2Q15822 529 aa23.63■■□□□ 1.37
CKLF-204ENST00000362093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.63■■□□□ 1.37
CKLF-204ENST00000362093 PIK3C2AO00443 1686 aa23.63■■□□□ 1.37
CKLF-204ENST00000362093 CPDO75976 1380 aa23.63■■□□□ 1.37
CKLF-204ENST00000362093 COL14A1Q05707 1796 aaKnown RBP23.63■■□□□ 1.37
CKLF-204ENST00000362093 MON2Q7Z3U7 1717 aa23.62■■□□□ 1.37
CKLF-204ENST00000362093 NWD2Q9ULI1 1742 aa23.62■■□□□ 1.37
CKLF-204ENST00000362093 NRKQ7Z2Y5 1582 aa23.62■■□□□ 1.37
CKLF-204ENST00000362093 PLCH1Q4KWH8 1693 aa23.62■■□□□ 1.37
CKLF-204ENST00000362093 EDC4Q6P2E9 1401 aaKnown RBP23.61■■□□□ 1.37
CKLF-204ENST00000362093 RGS12O14924 1447 aa23.6■■□□□ 1.37
CKLF-204ENST00000362093 SLIT3O75094 1523 aa23.6■■□□□ 1.37
CKLF-204ENST00000362093 ZRANB1Q9UGI0 708 aa23.6■■□□□ 1.37
CKLF-204ENST00000362093 USP31Q70CQ4 1352 aa23.6■■□□□ 1.37
CKLF-204ENST00000362093 NME9Q86XW9 330 aa23.59■■□□□ 1.37
CKLF-204ENST00000362093 ANKRD36BQ8N2N9 1353 aa23.59■■□□□ 1.37
CKLF-204ENST00000362093 KCNH5Q8NCM2 988 aa23.57■■□□□ 1.36
CKLF-204ENST00000362093 NRAPQ86VF7 1730 aa23.56■■□□□ 1.36
CKLF-204ENST00000362093 ONECUT3O60422 494 aaPredicted RBP23.56■■□□□ 1.36
CKLF-204ENST00000362093 CCDC9Q9Y3X0 531 aaKnown RBP23.56■■□□□ 1.36
CKLF-204ENST00000362093 GLI3P10071 1580 aa23.56■■□□□ 1.36
CKLF-204ENST00000362093 ARHGEF25Q86VW2 580 aa23.54■■□□□ 1.36
CKLF-204ENST00000362093 CAMTA1Q9Y6Y1 1673 aa23.53■■□□□ 1.36
CKLF-204ENST00000362093 SPATA31A5Q5VU36 1347 aa23.53■■□□□ 1.36
CKLF-204ENST00000362093 SPATA31A7Q8IWB4 1347 aa23.53■■□□□ 1.36
CKLF-204ENST00000362093 AATKQ6ZMQ8 1374 aa23.52■■□□□ 1.36
CKLF-204ENST00000362093 EVA1CP58658 441 aa23.52■■□□□ 1.36
CKLF-204ENST00000362093 STRN4Q9NRL3 753 aa23.51■■□□□ 1.35
CKLF-204ENST00000362093 LMO7Q8WWI1 1683 aa23.51■■□□□ 1.35
CKLF-204ENST00000362093 SOX12O15370 315 aa23.5■■□□□ 1.35
CKLF-204ENST00000362093 CARD14Q9BXL6 1004 aa23.5■■□□□ 1.35
CKLF-204ENST00000362093 USP54Q70EL1 1684 aa23.5■■□□□ 1.35
CKLF-204ENST00000362093 ZBTB7CA1YPR0 619 aa23.49■■□□□ 1.35
CKLF-204ENST00000362093 C11orf95C9JLR9 678 aaPredicted RBP23.49■■□□□ 1.35
CKLF-204ENST00000362093 AXIN2Q9Y2T1 843 aa23.49■■□□□ 1.35
CKLF-204ENST00000362093 SPATA31A1Q5TZJ5 1347 aa23.49■■□□□ 1.35
CKLF-204ENST00000362093 NFAT5O94916 1531 aa23.49■■□□□ 1.35
CKLF-204ENST00000362093 FYB1O15117 783 aa23.48■■□□□ 1.35
CKLF-204ENST00000362093 SEPT12Q8IYM1 358 aa23.48■■□□□ 1.35
CKLF-204ENST00000362093 OVOS2A0A0J9YW53 1432 aa23.48■■□□□ 1.35
CKLF-204ENST00000362093 OVOS2Q6IE36 1432 aa23.48■■□□□ 1.35
CKLF-204ENST00000362093 LARP1Q6PKG0 1096 aaKnown RBP23.47■■□□□ 1.35
CKLF-204ENST00000362093 UPF1Q92900 1129 aaKnown RBP eCLIP23.47■■□□□ 1.35
CKLF-204ENST00000362093 COL18A1P39060 1754 aa23.46■■□□□ 1.35
CKLF-204ENST00000362093 MYOM1P52179 1685 aa23.46■■□□□ 1.35
CKLF-204ENST00000362093 FAM98CQ17RN3 349 aaKnown RBP23.46■■□□□ 1.35
CKLF-204ENST00000362093 POLR3GLQ9BT43 218 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms