RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 IL27Q8NEV9 243 aa9.68□□□□□ -0.86
CTNND1-204ENST00000361796 TCP11L2Q8N4U5 519 aa9.68□□□□□ -0.86
CTNND1-204ENST00000361796 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-204ENST00000361796 PRKAR2BP31323 418 aa9.67□□□□□ -0.86
CTNND1-204ENST00000361796 HSP90AB4PQ58FF6 505 aa9.67□□□□□ -0.86
CTNND1-204ENST00000361796 TSPY26PQ9H489 355 aa9.67□□□□□ -0.86
CTNND1-204ENST00000361796 BRMS1Q9HCU9 246 aa9.67□□□□□ -0.86
CTNND1-204ENST00000361796 SPINK5Q9NQ38 1064 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-204ENST00000361796 ARGLU1Q9NWB6 273 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-204ENST00000361796 OFD1O75665 1012 aa9.66□□□□□ -0.86
CTNND1-204ENST00000361796 ATF3P18847 181 aa9.66□□□□□ -0.86
CTNND1-204ENST00000361796 STRN4Q9NRL3 753 aa9.66□□□□□ -0.86
CTNND1-204ENST00000361796 NAT10Q9H0A0 1025 aaKnown RBP9.66□□□□□ -0.86
CTNND1-204ENST00000361796 ABTB2Q8N961 1025 aa9.66□□□□□ -0.86
CTNND1-204ENST00000361796 PSMA5P28066 241 aa9.65□□□□□ -0.86
CTNND1-204ENST00000361796 PPP2R1AP30153 589 aa9.65□□□□□ -0.86
CTNND1-204ENST00000361796 CFAP70Q5T0N1 1121 aa9.65□□□□□ -0.86
CTNND1-204ENST00000361796 FANCD2Q9BXW9 1451 aa9.65□□□□□ -0.86
CTNND1-204ENST00000361796 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.86
CTNND1-204ENST00000361796 ATP2B2Q01814 1243 aa9.65□□□□□ -0.86
CTNND1-204ENST00000361796 TTC39AQ5SRH9 613 aa9.65□□□□□ -0.86
CTNND1-204ENST00000361796 MRE11P49959 708 aa9.65□□□□□ -0.86
CTNND1-204ENST00000361796 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.87
CTNND1-204ENST00000361796 ESCO1Q5FWF5 840 aa9.65□□□□□ -0.87
CTNND1-204ENST00000361796 RAD54L2Q9Y4B4 1467 aa9.65□□□□□ -0.87
CTNND1-204ENST00000361796 GRM1Q13255 1194 aa9.64□□□□□ -0.87
CTNND1-204ENST00000361796 TMEM132AQ24JP5 1023 aa9.64□□□□□ -0.87
CTNND1-204ENST00000361796 MYL6BP14649 208 aa9.64□□□□□ -0.87
CTNND1-204ENST00000361796 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-204ENST00000361796 HSP90B2PQ58FF3 399 aa9.64□□□□□ -0.87
CTNND1-204ENST00000361796 CCDC30Q5VVM6 783 aa9.64□□□□□ -0.87
CTNND1-204ENST00000361796 FAM177A1Q8N128 213 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-204ENST00000361796 CLASRPQ8N2M8 674 aaKnown RBP9.64□□□□□ -0.87
CTNND1-204ENST00000361796 FGD6Q6ZV73 1430 aa9.64□□□□□ -0.87
CTNND1-204ENST00000361796 NBPF1Q3BBV0 1214 aa9.63□□□□□ -0.87
CTNND1-204ENST00000361796 KINO60870 393 aaKnown RBP9.63□□□□□ -0.87
CTNND1-204ENST00000361796 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-204ENST00000361796 SLC4A2P04920 1241 aa9.63□□□□□ -0.87
CTNND1-204ENST00000361796 MIA2Q96PC5 1412 aa9.63□□□□□ -0.87
CTNND1-204ENST00000361796 CNNM1Q9NRU3 951 aa9.63□□□□□ -0.87
CTNND1-204ENST00000361796 XBP1P17861 261 aa9.63□□□□□ -0.87
CTNND1-204ENST00000361796 KIF6Q6ZMV9 814 aa9.63□□□□□ -0.87
CTNND1-204ENST00000361796 PIBF1Q8WXW3 757 aa9.63□□□□□ -0.87
CTNND1-204ENST00000361796 CDK5RAP3Q96JB5 506 aa9.63□□□□□ -0.87
CTNND1-204ENST00000361796 MAP7D2Q96T17 732 aa9.63□□□□□ -0.87
CTNND1-204ENST00000361796 PRAM1Q96QH2 718 aa9.62□□□□□ -0.87
CTNND1-204ENST00000361796 TBC1D2BQ9UPU7 963 aa9.62□□□□□ -0.87
CTNND1-204ENST00000361796 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
CTNND1-204ENST00000361796 MYOM3Q5VTT5 1437 aa9.62□□□□□ -0.87
CTNND1-204ENST00000361796 ZHX3Q9H4I2 956 aa9.62□□□□□ -0.87
CTNND1-204ENST00000361796 STK38Q15208 465 aa9.62□□□□□ -0.87
CTNND1-204ENST00000361796 PLCD3Q8N3E9 789 aa9.62□□□□□ -0.87
CTNND1-204ENST00000361796 ACBD3Q9H3P7 528 aa9.62□□□□□ -0.87
CTNND1-204ENST00000361796 KRT18P05783 430 aaKnown RBP9.61□□□□□ -0.87
CTNND1-204ENST00000361796 SKAP1Q86WV1 359 aa9.61□□□□□ -0.87
CTNND1-204ENST00000361796 GNAI2P04899 355 aa9.61□□□□□ -0.87
CTNND1-204ENST00000361796 NUP133Q8WUM0 1156 aa9.61□□□□□ -0.87
CTNND1-204ENST00000361796 MAGEC2Q9UBF1 373 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-204ENST00000361796 ARHGAP5Q13017 1502 aa9.61□□□□□ -0.87
CTNND1-204ENST00000361796 SERPINC1P01008 464 aa9.61□□□□□ -0.87
CTNND1-204ENST00000361796 SART3Q15020 963 aaKnown RBP9.61□□□□□ -0.87
CTNND1-204ENST00000361796 BRD4O60885 1362 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-204ENST00000361796 H0YHG0 523 aa9.61□□□□□ -0.87
CTNND1-204ENST00000361796 DDX54Q8TDD1 881 aaKnown RBP9.61□□□□□ -0.87
CTNND1-204ENST00000361796 SULT6B1Q6IMI4 303 aa9.6□□□□□ -0.87
CTNND1-204ENST00000361796 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-204ENST00000361796 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
CTNND1-204ENST00000361796 SLC12A5Q9H2X9 1139 aa9.6□□□□□ -0.87
CTNND1-204ENST00000361796 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
CTNND1-204ENST00000361796 AXDND1Q5T1B0 1012 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-204ENST00000361796 GNAI3P08754 354 aa9.6□□□□□ -0.87
CTNND1-204ENST00000361796 CDR1P51861 262 aa9.6□□□□□ -0.87
CTNND1-204ENST00000361796 FGD5Q6ZNL6 1462 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 CCDC184Q52MB2 194 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 NOM1Q5C9Z4 860 aaKnown RBP9.59□□□□□ -0.87
CTNND1-204ENST00000361796 ANKRD50Q9ULJ7 1429 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 FKBP4Q02790 459 aaKnown RBP eCLIP9.59□□□□□ -0.87
CTNND1-204ENST00000361796 RRS1Q15050 365 aaKnown RBP9.59□□□□□ -0.87
CTNND1-204ENST00000361796 AFAP1Q8N556 730 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 ME1P48163 572 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 FAM193AP78312 1265 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 CCDC173Q0VFZ6 552 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 TANGO6Q9C0B7 1094 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 TNMDQ9H2S6 317 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 XPCQ01831 940 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-204ENST00000361796 CCDC158Q5M9N0 1113 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 CWC27Q6UX04 472 aaKnown RBP9.59□□□□□ -0.87
CTNND1-204ENST00000361796 IL1RAPL2Q9NP60 686 aa9.59□□□□□ -0.87
CTNND1-204ENST00000361796 SMARCA4P51532 1647 aa9.58□□□□□ -0.88
CTNND1-204ENST00000361796 ATAD2BQ9ULI0 1458 aa9.58□□□□□ -0.88
CTNND1-204ENST00000361796 LETM1O95202 739 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-204ENST00000361796 LRRCC1Q9C099 1032 aa9.58□□□□□ -0.88
CTNND1-204ENST00000361796 MIS18AQ9NYP9 233 aa9.58□□□□□ -0.88
CTNND1-204ENST00000361796 CUX1P39880 1505 aa9.58□□□□□ -0.88
CTNND1-204ENST00000361796 C11orf95C9JLR9 678 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-204ENST00000361796 FILIP1LQ4L180 1135 aa9.58□□□□□ -0.88
CTNND1-204ENST00000361796 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
CTNND1-204ENST00000361796 SMARCE1Q969G3 411 aa9.58□□□□□ -0.88
CTNND1-204ENST00000361796 ZNF396Q96N95 335 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms