RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 G3BP1Q13283 466 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCMTD1-201ENST00000360540 RPGRIP1LQ68CZ1 1315 aa17.21■□□□□ 0.35
PCMTD1-201ENST00000360540 DHX29Q7Z478 1369 aaKnown RBP17.21■□□□□ 0.35
PCMTD1-201ENST00000360540 RIC3Q7Z5B4 369 aa17.21■□□□□ 0.35
PCMTD1-201ENST00000360540 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
PCMTD1-201ENST00000360540 F6X3S4 739 aa17.2■□□□□ 0.34
PCMTD1-201ENST00000360540 EVA1CP58658 441 aa17.2■□□□□ 0.34
PCMTD1-201ENST00000360540 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
PCMTD1-201ENST00000360540 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
PCMTD1-201ENST00000360540 TRAPPC8Q9Y2L5 1435 aa17.2■□□□□ 0.34
PCMTD1-201ENST00000360540 MPNDQ8N594 471 aa17.19■□□□□ 0.34
PCMTD1-201ENST00000360540 USHBP1Q8N6Y0 703 aa17.19■□□□□ 0.34
PCMTD1-201ENST00000360540 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
PCMTD1-201ENST00000360540 ATAD2Q6PL18 1390 aa17.19■□□□□ 0.34
PCMTD1-201ENST00000360540 NEUROD6Q96NK8 337 aa17.19■□□□□ 0.34
PCMTD1-201ENST00000360540 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
PCMTD1-201ENST00000360540 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
PCMTD1-201ENST00000360540 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
PCMTD1-201ENST00000360540 SCAF11Q99590 1463 aaKnown RBP17.19■□□□□ 0.34
PCMTD1-201ENST00000360540 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 FANCAO15360 1455 aa17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 PLEKHH1Q9ULM0 1364 aa17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 H3BQV1 296 aa17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 SYCP2Q9BX26 1530 aa17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 GAS2L2Q8NHY3 880 aa17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 LRPPRCP42704 1394 aaKnown RBP17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 SKOR2Q2VWA4 1001 aaPredicted RBP17.18■□□□□ 0.34
PCMTD1-201ENST00000360540 FAM184AQ8NB25 1140 aa17.17■□□□□ 0.34
PCMTD1-201ENST00000360540 SIL1Q9H173 461 aa17.17■□□□□ 0.34
PCMTD1-201ENST00000360540 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
PCMTD1-201ENST00000360540 GTF2E1P29083 439 aaPredicted RBP17.17■□□□□ 0.34
PCMTD1-201ENST00000360540 SF3A1Q15459 793 aaKnown RBP17.17■□□□□ 0.34
PCMTD1-201ENST00000360540 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
PCMTD1-201ENST00000360540 PZPP20742 1482 aa17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 GNAI2P04899 355 aa17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 RALGAPBQ86X10 1494 aa17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 PRPF40AO75400 957 aaKnown RBP17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 GNAI3P08754 354 aa17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 FBXW7Q969H0 707 aa17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 GOLGA6L6A8MZA4 724 aa17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 RLBP1P12271 317 aa17.16■□□□□ 0.34
PCMTD1-201ENST00000360540 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
PCMTD1-201ENST00000360540 NRDCO43847 1150 aa17.15■□□□□ 0.34
PCMTD1-201ENST00000360540 RUFY2Q8WXA3 655 aa17.15■□□□□ 0.34
PCMTD1-201ENST00000360540 TCOF1Q13428 1488 aaKnown RBP17.15■□□□□ 0.34
PCMTD1-201ENST00000360540 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
PCMTD1-201ENST00000360540 CLASRPQ8N2M8 674 aaKnown RBP17.15■□□□□ 0.34
PCMTD1-201ENST00000360540 NUCB2P80303 420 aa17.14■□□□□ 0.33
PCMTD1-201ENST00000360540 SMC3Q9UQE7 1217 aa17.14■□□□□ 0.33
PCMTD1-201ENST00000360540 FYB1O15117 783 aa17.14■□□□□ 0.33
PCMTD1-201ENST00000360540 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.33
PCMTD1-201ENST00000360540 CREBRFQ8IUR6 639 aa17.14■□□□□ 0.33
PCMTD1-201ENST00000360540 MAGI3Q5TCQ9 1506 aa17.14■□□□□ 0.33
PCMTD1-201ENST00000360540 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
PCMTD1-201ENST00000360540 WDR62O43379 1518 aa17.14■□□□□ 0.33
PCMTD1-201ENST00000360540 KDM4AO75164 1064 aa17.13■□□□□ 0.33
PCMTD1-201ENST00000360540 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
PCMTD1-201ENST00000360540 APPP05067 770 aa17.13■□□□□ 0.33
PCMTD1-201ENST00000360540 CFAP43Q8NDM7 1665 aa17.13■□□□□ 0.33
PCMTD1-201ENST00000360540 MYL6BP14649 208 aa17.13■□□□□ 0.33
PCMTD1-201ENST00000360540 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
PCMTD1-201ENST00000360540 FAM177BA6PVY3 158 aa17.12■□□□□ 0.33
PCMTD1-201ENST00000360540 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
PCMTD1-201ENST00000360540 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
PCMTD1-201ENST00000360540 NCKAP5LQ9HCH0 1330 aa17.12■□□□□ 0.33
PCMTD1-201ENST00000360540 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
PCMTD1-201ENST00000360540 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
PCMTD1-201ENST00000360540 TSHZ3Q63HK5 1081 aa17.11■□□□□ 0.33
PCMTD1-201ENST00000360540 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
PCMTD1-201ENST00000360540 SRGAP3O43295 1099 aa17.11■□□□□ 0.33
PCMTD1-201ENST00000360540 ATF3P18847 181 aa17.11■□□□□ 0.33
PCMTD1-201ENST00000360540 MCM4P33991 863 aa17.11■□□□□ 0.33
PCMTD1-201ENST00000360540 UPF3BQ9BZI7 483 aaKnown RBP17.11■□□□□ 0.33
PCMTD1-201ENST00000360540 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
PCMTD1-201ENST00000360540 FSD1Q9BTV5 496 aa17.1■□□□□ 0.33
PCMTD1-201ENST00000360540 DISP1Q96F81 1524 aa17.1■□□□□ 0.33
PCMTD1-201ENST00000360540 WASLO00401 505 aaPredicted RBP17.1■□□□□ 0.33
PCMTD1-201ENST00000360540 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
PCMTD1-201ENST00000360540 PHF14O94880 888 aa17.1■□□□□ 0.33
PCMTD1-201ENST00000360540 THEMISQ8N1K5 641 aaPredicted RBP17.1■□□□□ 0.33
PCMTD1-201ENST00000360540 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
PCMTD1-201ENST00000360540 NASPP49321 788 aaPredicted RBP17.09■□□□□ 0.33
PCMTD1-201ENST00000360540 BICD2Q8TD16 824 aa17.09■□□□□ 0.33
PCMTD1-201ENST00000360540 DNAJC2Q99543 621 aaKnown RBP17.09■□□□□ 0.33
PCMTD1-201ENST00000360540 FIBPO43427 364 aa17.09■□□□□ 0.33
PCMTD1-201ENST00000360540 PLCH2O75038 1416 aa17.09■□□□□ 0.33
PCMTD1-201ENST00000360540 SRCIN1Q9C0H9 1055 aa17.09■□□□□ 0.33
PCMTD1-201ENST00000360540 KIAA0556O60303 1618 aa17.08■□□□□ 0.33
PCMTD1-201ENST00000360540 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.33
PCMTD1-201ENST00000360540 ATP6V1DQ9Y5K8 247 aa17.08■□□□□ 0.33
PCMTD1-201ENST00000360540 KDM5BQ9UGL1 1544 aa17.08■□□□□ 0.32
PCMTD1-201ENST00000360540 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.32
PCMTD1-201ENST00000360540 ERC2O15083 957 aa17.08■□□□□ 0.32
PCMTD1-201ENST00000360540 SEC24BO95487 1268 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms